Basic Information

Gene Symbol
Arid2
Assembly
GCA_032441825.1
Location
CM063730.1:2031737-2051207[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-24 4.3e-21 75.4 0.0 1 89 15 101 15 101 0.94
2 2 5 1.4e+04 -3.2 0.0 32 45 654 667 642 673 0.75

Sequence Information

Coding Sequence
ATGGCCATCGTACTGAACAAAGACCCGGCCAGCTACGCGAAAGAAAAGGCCAGCTTCCTCAGAGACCTCCAGCATTTTCATGACACCAGAGGGACACCGAGTCGCGCCTTACCGAAAATAGACGGAAAGGAGATCGATTTGTATCTTCTGTACGTACTTGTCACAGCGCAAGGAGGTTGGGTTAAGGTGAACCAAAGAAATGACTGGAAGAatcttttagaaaattttgatCTGCTTTCGTCCTGTATAAATGCCGAAGTCgcgttaaaacaaatatatttaagGTATTTGGatcgttatgaaaaaattaattttttgggAGAAACCGGTTCAATTGCTGGCGATGATGACGAAGATAGTAGACACAAAAAATGGTCTGCTAGAGCATTACATTCTGTTCCTTTAGTTTACAATCATCATCAACACACTGTTGTTGaaccAATTCGATCATTTCACGGTTTATCAACCAACCTTTACAAAGCAAACGATTATGAAAAATTGTCTTTATCCTTGCTGTCGCCTTTACCAAATGAACAGGATCTAGCGATTAATGTTTGCATACTGTTATCTAACGAAAACAAGCATGCAATCAAGTTATCCAAGTGTCCACAAATCCTTCACCATCTTTTGGCTCATGCTGGAGTATTTACCCACCCTGCTTCGCGTAAGTATTGGGAGGAATATTATCGGAAAGTACGAAAGTGGTCAATAAAATCGTTCTGGAAAGAAGTTATGGACGAACAAGAACTAATGTATTTAAcggacgaaaatcgtttttgtgcCCGTACTCCGAGAATTTTACCACGAAAAAAAGATGACGAGTCGAGCTCGTGtagtgatgatgatgatgattataAAACtagtaaagtaaaattaaactttGATCCTTCTGATGATGAGTTATTTGGTCTCAAAAGGCCTCTTGGTACAGACGATCCATATGGGCAACGGGTCTATCAAGTGGCGTTAATCCTaagaaatttaacattttttgaaGAGAACATGAAAGTTATGGGTCACGATTTAACTTTCTTAAGATTTGTGTTATTGTGTTGTGCAACACGATGGAATTGTTTGCATCAAATTGGGTTTGAGATGTTGGGTAACATTGGACCTGTAGTACCTTTAGATGTTGGTTCTTTACAGCACGCTACACTGAATATTgtctgtaaaaatataaccgaATCTAATGATCGTTCCATCATATTAAGTGCAGTCGAAGCGTTGAATAGAATGGGAACGAATGAGTCAAATGAAGAAttcttattgaaaaatattaatcaaaaagtatacgataaaatttgtaatatgttATCCTTACATgacataatgttattaatacaaacaTTGGAATGTTTGTACTCATTAAGTTCGCTTGGTGAACATGCTTGTAATGCTATCGTTCATGTACATGGTGTTATTGATACTTTGGTTTCATTAATTACTGTCgagGCGCAAACATACGGTCCTAAAGCATGTATATTGATGAGAGTTATTGAGACTGTTACGACTCCTTCAACAACAACATTTACTACTGAATCGACACCAAAGACACATTTAATGGCAGCCCCAGCTAGTGTTCCTTCATCTTCCAGTGCCTCACAACATCTCATTTCTACTTTCACATCTCAGAACGTACTTCCTCTACCTACACCAGCAGTTGCTAACCCTGTTATACTACCTAATGCTCCTACTGCCGTTCCAGTTATGTCTACAACTCTAAATACTTTTACTTCTGTGGCCCCTACCGGACCACCTCCTATACAATCAGTTGCTAGCCCTAAAATGATGGCTCCAGttacgACCCATTCAACAGCATTAGCGTCTACAAATCAAACTTTGCCAAGTGTTCCTCAAGGAGCCAATTTAATTCAACAAGAGAATGAGCAATTTGCTTTGAATTGGATACGTTCTACACTTGAAGTATGTCCTACTCCCGGACGAGGAATTGATCAAGCTgaattgtacaaattatacatGACTGCTTGTGCTAGAGCCGGGAGAAGAGGAGTTATCGCTCCACTTCATTTTCCACGTTGTGTGAAaGCTGTGTTTGGACCTGGAGTTGGACCGAAAAGTGTAAAGCTCGCTCAAAGTCAAGGCGGGATAGCCATGGATCCACCAACTCAAATTATTGCTTATGAAGGAATTCAGGTTCGATCAAAACCATTGCCAATCCCAATCAGTGCGCCAATGGTTGTGACGCAATCTACGTCTGTTGTAACAGCCTCGTCTATTCCTACCTCACCTATCCTTAAAGCACAACTCAGTGCACCAGCTACTAACGCCCAACAGAATTCTCCTTTAATTAAACGTGAAATCCTGGGAAAGacCATACCAAATCCTGTACCATCTATTAGTTTTGGAACCGAGACATCTGTCATCACTACTGTTGCATCTGCAACTATGTCTCAATCTGAAGGAACATTATTATCTAATAGCAATACatctttaattaaaacgttattagcTAGCAAGGTATGCGATCCAAAAGTGAATGTGCCTTCTGCGACAATTAAACTTAGTAATAACGAATCTTGCACGTTATACGCTTCTTCTCAAAATTGCAATTCAACAGTAATTACTGAGGTAACGCAGCGTcagcaacaacaaaaaatattacaacaacaaaacaatTCTTCTACATTAGCTACGACTTCatctataataataccaaAACAAACTGCTAGAATCAATGGTATTAGAACTTCATCTTCAGATgaCGTAAGTAAAAATGATTCTGGTGTAGTGGTGACAAAATCTGAACTACAGCAATctgtaataacaacaattgcATCCagtaatagaattattatcaatagcttgaataaattcaatgataaagATCAAAGTGAAGGGACCATAGTGGAACcaaaaaaggaatattttttaaatggaaCGCCAGAAGTATCTGAAGTAAATGACATAACGTCAAAGAGTGTAATGTTATCAGGGTTATTAGATAAAGAGATCGAGAAAAAAGATACACCATTTTTATTTGGGTCAATACAAGTTGGGGACAATGGACTGGAATTAAATGGAGCATGCGTAGAAAATAAAGAGAAATCGGCAAGCACATGTATTAAAGTTAAACAGGAAGTAGATATCAAACCTGGACAACAATTGGTTAAAGTGATAGTTGGAGGAAAACGAATGTCGGATGAAAAAGTTCCTTGTGATCAGGCGCCTAAAAAACCACATCTCAATGGTAATACTAGTAGTAATGATGAAGAAAACATGGAGGTCGATGAGAGTAACATAAAAGCTTCTTCCACTGCTGCTAATCTTTATGCTGCTTTAGCAGCCGACGTATTGGAAGATATTGATGGTTTAGAGGATGAACCACCGAAAATTCCTGTTTCTCAACTGCAACAGATTCAAGTTAATACTCAACCCACCCAACAAATGTTCCAAACTCCTGGCCAAATCATTGTTTCATCTTCAAACGCCCAATGGACGTCAAGTAATAATCAAAGAGGTATTGTGACAATGGTTCATCAAGGTAGTGCAGGCGGGCAACAATATGTCTTGGCCCAACCTCAGTCTACTTTGGTACAAGGTCAAGCTCAAACTGTACTCTTAGCCCAGACGACACCTCAAGGTTCAGGtgctaaaacaattataattcttCAGCAGCCTGCTGGGAATAACAGTCAATCACCAAATACTATGACATTGAGTCAAACGAACTTTGTGCAATCCTCTTCGCCGAATAACCAATCTAAAGTTATTGTTCAACGGATTCCAACACCACCGACTATTAAACAAACTACGACTATGGTTACTAGACCTGTAACGCCAGTCACATCGAACGCCAATAAACAGCAAGTTAAAGTGATTAAAACTGTACCTCATATGGTATCTACGTGCATGCCTACACCGTCCATTCAAACTAGGGTACGCACCACAACTCCATTAAAAGTCACTAGTGAAGTACACACTCCTGTGAATCAAGGTCAATTTTTATGCGAGTGGAGAGGATGCATGCGTAATTTCAAATCTGCTAACGAGGTTTACATGCATGCATGTGAATCTCATTGTCCTTCCAATGGTGTACAAGAAATGCAGTGTTTGTGGGAGCGGTGTGACGCAATGAAAcgcaaacgattttcattaatGACACACTTGTTCGATAGACACTGTAATCCTGATGTATTGAGAATGATGGCAGTTCGAAGGAAACAACTTTCTCAAAGTGGTCGTAGTGAAATACCTGCTCCAGCACCACCTACACCTCATCCTGGTTATGCGCCTAATGCAGCTTTTAATGCTATTAAGAGGCATGCCTTAGAATTCGTTAATCCCAAAGAATTAcagCAAAGACTAGTGAGTGCAGCTGGCAGTCATCAATCGGCTGTTAATGTCGATCaggATGATAATGAAGGTCCAGTAACAAAGAGCATACGTCTTACGTCAGCACTAATTCTACGCAACCTAGTCATTTATTCTTCGACTGGAAGatggCATTTGAAACGTTATGAAGCACACCTATCAAATATTGCACTGAGTAATGTCGAATCATCAAGAACAATCTCGCAGCTTTTATTCGATTTGTGCCATTCCAGCTGA
Protein Sequence
MAIVLNKDPASYAKEKASFLRDLQHFHDTRGTPSRALPKIDGKEIDLYLLYVLVTAQGGWVKVNQRNDWKNLLENFDLLSSCINAEVALKQIYLRYLDRYEKINFLGETGSIAGDDDEDSRHKKWSARALHSVPLVYNHHQHTVVEPIRSFHGLSTNLYKANDYEKLSLSLLSPLPNEQDLAINVCILLSNENKHAIKLSKCPQILHHLLAHAGVFTHPASRKYWEEYYRKVRKWSIKSFWKEVMDEQELMYLTDENRFCARTPRILPRKKDDESSSCSDDDDDYKTSKVKLNFDPSDDELFGLKRPLGTDDPYGQRVYQVALILRNLTFFEENMKVMGHDLTFLRFVLLCCATRWNCLHQIGFEMLGNIGPVVPLDVGSLQHATLNIVCKNITESNDRSIILSAVEALNRMGTNESNEEFLLKNINQKVYDKICNMLSLHDIMLLIQTLECLYSLSSLGEHACNAIVHVHGVIDTLVSLITVEAQTYGPKACILMRVIETVTTPSTTTFTTESTPKTHLMAAPASVPSSSSASQHLISTFTSQNVLPLPTPAVANPVILPNAPTAVPVMSTTLNTFTSVAPTGPPPIQSVASPKMMAPVTTHSTALASTNQTLPSVPQGANLIQQENEQFALNWIRSTLEVCPTPGRGIDQAELYKLYMTACARAGRRGVIAPLHFPRCVKAVFGPGVGPKSVKLAQSQGGIAMDPPTQIIAYEGIQVRSKPLPIPISAPMVVTQSTSVVTASSIPTSPILKAQLSAPATNAQQNSPLIKREILGKTIPNPVPSISFGTETSVITTVASATMSQSEGTLLSNSNTSLIKTLLASKVCDPKVNVPSATIKLSNNESCTLYASSQNCNSTVITEVTQRQQQQKILQQQNNSSTLATTSSIIIPKQTARINGIRTSSSDDVSKNDSGVVVTKSELQQSVITTIASSNRIIINSLNKFNDKDQSEGTIVEPKKEYFLNGTPEVSEVNDITSKSVMLSGLLDKEIEKKDTPFLFGSIQVGDNGLELNGACVENKEKSASTCIKVKQEVDIKPGQQLVKVIVGGKRMSDEKVPCDQAPKKPHLNGNTSSNDEENMEVDESNIKASSTAANLYAALAADVLEDIDGLEDEPPKIPVSQLQQIQVNTQPTQQMFQTPGQIIVSSSNAQWTSSNNQRGIVTMVHQGSAGGQQYVLAQPQSTLVQGQAQTVLLAQTTPQGSGAKTIIILQQPAGNNSQSPNTMTLSQTNFVQSSSPNNQSKVIVQRIPTPPTIKQTTTMVTRPVTPVTSNANKQQVKVIKTVPHMVSTCMPTPSIQTRVRTTTPLKVTSEVHTPVNQGQFLCEWRGCMRNFKSANEVYMHACESHCPSNGVQEMQCLWERCDAMKRKRFSLMTHLFDRHCNPDVLRMMAVRRKQLSQSGRSEIPAPAPPTPHPGYAPNAAFNAIKRHALEFVNPKELQQRLVSAAGSHQSAVNVDQDDNEGPVTKSIRLTSALILRNLVIYSSTGRWHLKRYEAHLSNIALSNVESSRTISQLLFDLCHSS