Rnym003129.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- Arid2
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000006.1:2902001-2921411[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-23 2.2e-20 73.3 0.0 1 89 15 101 15 101 0.94 2 2 9.3 1.8e+04 -3.3 0.0 32 45 657 670 648 676 0.76
Sequence Information
- Coding Sequence
- ATGGCCAGTGTCCTGAACAAAGATCCGGCCAACTACGCGAGAGAGAAGGCCAGCTTCCTCAGGGACTTGCAACACTTCCACGACACCAGAGGAACACCAAGCCGTGTCTCACCAAAAATAGATGGAAaagatattgatttatatcttCTATATGTTTTGGTCACTGCACAAGGAGGATGGGTTAAGGTTAACCAAAGAAACGATTGGAAGAATCTTTTGGAAAATTTTGATCTGCTTTCATCTTGTATTAATGCTGAAGTTGCATTGAAACAAATATACTTAAGgtatttagatcgttatgaaaaaattaactttttgggAGAAACTGGATCAATTGCTGGTGACGATGATGAAGATAGTAGACATAAAAAATGGTCTGCTAGAGCATTGCATTCTGTTCCTTTAGTTTATAATCACCATCAACATGCTGTTAATGAACCTGTAAGAGCATTTCATGGTTTATCAACCAATCTCTACAAAGCAagtgattatgaaaaattatctttatcaTTGCTATCACCTTTACCTAATGAGCAAGACCTGGCAATTAATGTCTGCATACTGTTATCTAATGAAAACAAGCATGCAATTAAGTTATCAAAGTGCCCTCAAATTCTTCACCATCTATTGGCTCATGCTGGTGTATTTACTCATTctGCTTCACGCAAATATTGGGATGACTACTATCGGAAAGTACGAAAATggtcaataaaatcattttggaAAGAAGTTCTTGATGAACAAGAACTTATGTACTTGACAGATGAAAATCGTTTTTCTGCTAGAACCCCTAAAACTATTCCACGTAAAGATGATGAGTCAAGTTCTTGtagtgatgatgatgatgattttagaaataataaagtgaaattaaattttgatccaTCTGACGATGAATTGTTTGGTCTCAAAAGACCCCTTGGTACAGATGACCCATATGGTCAACGAGTATACCAAGTGGCATTAATACTCAgaaatttgacattttttgaagaaaatatGAAAGTTATGGGTCAagacttaacatttttaagatttgtTTTGTTATGTTGTGCAACAAGATGGAATTGTTTGCATCAAATTGGTTTTGAAATGTTGGGTAATATTGGACCTGTAGTACCTCTTGATGTTGGTTCATTACAGCAtgctacattaaatattgtctgtaaaaatattactgaatCTAACGATCGTTCTATCATACTAAGTGCGGTTGAGGCTTTAAATAGAATGGGCTCTAAAGAATCAAAtgaagaatttttattaaaaaatattaatcaaaagGTATACGATAAAATTTGTAACATGTTATCCTTGcatgatattatgttgttgATACAAACATTGGAATGTCTTTACTCATTGAGCTCACTTGGTGAACGCGCTTGCAATGCAATAGTTCATGTTCATGGAGTTATTGATACTCTGGTGTCTTTAATTACTGTCGagGCACAGACATATGGTCCTAAAGCATGTATATTGATGAGAGTTATTGAGACTGTTACGACCCCTTCAACGACAACATTTGCTGCAGAATCAGCTCCTAAGACTCATATGATGGCAGCTCCTAGTGTTCCTCCGCCTTCTAATGCATCCCAACATCTCATTTCGACTTTCACGTCTCAGAATGTACTCCCACTGCCAACACCAGCGGTGGCTAACCCTGTTATATTACCTAATGCTCCAAGTGCAGTACCTGTTATGTCtacaactttaaatacttttacatCTGTAACACCAACTggaccaccaccaccacctgTGCAATCAGTTGCTAGCTCTAAAATTATGGTTccagttactaTGACTGTTACAACCAATTCAGCTGTGGTGTCTACAAACCAAACTTCTCCTAGCGTTCCTCAACCAGCCAATATGATCCAACAAGAGAATGAACAATTTGCATTAAATTGGATTCGTGCTGTGCTTGAAGTGTGCCCTACACCTGGACGAGGAATTGATCAAgctgaattatataaattatacatgacTGCTTGTGCTAGAGCTGGAAGAAGAGGAGTTATTGCTCCACTTCATTTTCCACGTTGTGTCAAagCTGTGTTTGGACCTGGTGTTGGACCAAAAAGTGTAAAGCTTGCACAAAGTCAGGGTGGAATAGCCATGGAACCGCCTACTCAAATTATTGCTTACGAAGGAATTCAGGTTCGATCAAAACCATTGTCATTCCCGATCAACACACCATTGGTTGTGACACAATCTACATCTGTAACACCATCGTCCATTCCTACCTCACCTATCCTTAAAGCACAACTCAGTGCACCAGCTACTAATGTCCAACAGAATTCTCCTTTAATTAAACGTGAAATCTTAGGAAagacAATACAAAATCCTGTATCATCCACAAGCACTGCAAATGAAACATCTGTCATTACTACAGTTGCATCTACTACTGTATCTCAATCTGAAGGaacattattatctaatagCAATAcatctttaattaaaacattattagctAGCAAGGTATGCGATCCAAAATTGAATGTGCCTTCTGCGACCATTAAACTTAGTAATAATGAGTCATGCACGTTATATGCTTCTTCTCAAAATTGCAATTCATCAGTAATTACTGAGGTGGCACAGCGTCAGCAACAacagaaaatattacaacaacaAAATAGTTCAACTACTACATTTGCTTCAGCATCATCGATAGTACCTAAGCAAACTGCCAGAATCAATGGTATCAGGACTACAACTCCAGATgatGTATGTAAAAATGATACAAGTGTAACTGTGTCTAAATCAGAACAACAGTCTGTAATTACAACAATTGCTTCcagtaataaaatgttggcCAATagcttgaataaaattaatgataaagatCAAAGTGAAATGATTTTACTGGAACCAAAAAAGGAATCTCTTCTAAACGGAACTCCAGAGGTTACAGAAGTTAACGACATCGCATCAAAGAGTGTAATGTTATCAGGGCTATTAGATAAAGAAATTGAGAAAAAAGATGCACCATTTTTATTTGGATCAATACAAGTTGGGGACAATGGATTAGAATTAAATGGTGCATGCTCAGAAGCAAAAGAAAAATCAACTCCtgcttgtattaaaattaaacaggaAGCAGGAGATGAAAAACCTGGACAGCAATTAGTTAAAGTGATTGTTGGAGGAAAACGATCAGCTGATAAGGACATTCCTTGCGATCAAGCACCTAAAAAACCACATCTTAATGGTAACAGCAGTAGCAATGATGAAGAAAACATGGAGGTTGATGAAAGTAATATGAAAGCTTCTTCAACTGCTGCCAATCTTTATGCTGCTTTAGCAGCTGATGTTTTAGAAGATATTGATGGTTTAGATGATGAACCACCAAAAACAACTCCTGCTCCTCAACAGCAAATTCAAGTCAATACTCAACCAACAACTCAACAAATTTTCCAAACCCCTGGGCAAATCATTGTATCGTCTTCAAACACTCAATGGCCATCAAATAATCAAAGAGGTATTGTAACAATGGTTCATCAAGGTAGTGCTGGTGGGCCACAATATGTTTTGGCACAACCTCAATCTGCTTTAGTACAAGGTCAAGCTCAAACTGTTCTTGTAGCCCAAACCACACCACAAGGTTCAGGagctaaaacaattataattcttCAACAGCCTGCTGGAAATAATAATCAGTCATCTAATACTATGACTTTAAGTCAGACTAATTTTGTTCAAACTTCTTCACCATCGAACCAATCTAAAGTAATTGTACAACGAATTCCAACAACACCAACTATTAAACAAACCACAACTATGGTGACTAGACCTGTAACGCCTGTCACTTCTAACGCTAATAAACAGCAAATTAAAGTCATTAAGACTGTACCTCATATTGTATCTGCCTCTTTGCCTACACCGTCTGTTCAAACTAGAATACGTACTACAACCCCAGTAAAGGTAACTGGGGAAGTCCATACCACTACCAATCACCAAGGACAGTTTTTATGTGAGTGGAGAGGTTGTATGCGTAATTTTAAATCAGCAAACGAGGTTTACATGCATGCATGTGAGTCTCATTGTCCTTCTAATGGTGTACAAGAAATGCAATGTTTATGGGAACGATGTGATGCTATGAAACGCAAGAGATTTTCTTTAATGACACATTTATTTGATAGGCACTGTAATCCTgatgtATTGAGAATGATGGCAGTTCGAAGAAGACAATTATCTCAAAGTGGTCGTAGTGAAATTCCAGCTCCAGCACCACCAACACCTCATCCTGGTTATGCGCCAAATGCTGCCTTTAATGCTATTAAAAGGCATGCATTAGAATTTGTTAACCCCAAAGAACTACAGCAAAGACTAGTGAGTGCGGCTGGCAATCATCAATCGGCTGGAAATGTCGATCAGgATGATAATGAAGGTCCTGTAACTAAGAGCATACGTTTAACGTCAGCACTTATTTTGAGGAACCTAGTCATTTATTCTTCAACTGGAAGAtgGCATTTAAAACGATATGAAGCACACTTGTCAAATATAGCACTGAGTAATGTTGAATCATCAAGAACAATTTCTCAGCTTTTATTTGATTTGTGTCATTCCAGCTGA
- Protein Sequence
- MASVLNKDPANYAREKASFLRDLQHFHDTRGTPSRVSPKIDGKDIDLYLLYVLVTAQGGWVKVNQRNDWKNLLENFDLLSSCINAEVALKQIYLRYLDRYEKINFLGETGSIAGDDDEDSRHKKWSARALHSVPLVYNHHQHAVNEPVRAFHGLSTNLYKASDYEKLSLSLLSPLPNEQDLAINVCILLSNENKHAIKLSKCPQILHHLLAHAGVFTHSASRKYWDDYYRKVRKWSIKSFWKEVLDEQELMYLTDENRFSARTPKTIPRKDDESSSCSDDDDDFRNNKVKLNFDPSDDELFGLKRPLGTDDPYGQRVYQVALILRNLTFFEENMKVMGQDLTFLRFVLLCCATRWNCLHQIGFEMLGNIGPVVPLDVGSLQHATLNIVCKNITESNDRSIILSAVEALNRMGSKESNEEFLLKNINQKVYDKICNMLSLHDIMLLIQTLECLYSLSSLGERACNAIVHVHGVIDTLVSLITVEAQTYGPKACILMRVIETVTTPSTTTFAAESAPKTHMMAAPSVPPPSNASQHLISTFTSQNVLPLPTPAVANPVILPNAPSAVPVMSTTLNTFTSVTPTGPPPPPVQSVASSKIMVPVTMTVTTNSAVVSTNQTSPSVPQPANMIQQENEQFALNWIRAVLEVCPTPGRGIDQAELYKLYMTACARAGRRGVIAPLHFPRCVKAVFGPGVGPKSVKLAQSQGGIAMEPPTQIIAYEGIQVRSKPLSFPINTPLVVTQSTSVTPSSIPTSPILKAQLSAPATNVQQNSPLIKREILGKTIQNPVSSTSTANETSVITTVASTTVSQSEGTLLSNSNTSLIKTLLASKVCDPKLNVPSATIKLSNNESCTLYASSQNCNSSVITEVAQRQQQQKILQQQNSSTTTFASASSIVPKQTARINGIRTTTPDDVCKNDTSVTVSKSEQQSVITTIASSNKMLANSLNKINDKDQSEMILLEPKKESLLNGTPEVTEVNDIASKSVMLSGLLDKEIEKKDAPFLFGSIQVGDNGLELNGACSEAKEKSTPACIKIKQEAGDEKPGQQLVKVIVGGKRSADKDIPCDQAPKKPHLNGNSSSNDEENMEVDESNMKASSTAANLYAALAADVLEDIDGLDDEPPKTTPAPQQQIQVNTQPTTQQIFQTPGQIIVSSSNTQWPSNNQRGIVTMVHQGSAGGPQYVLAQPQSALVQGQAQTVLVAQTTPQGSGAKTIIILQQPAGNNNQSSNTMTLSQTNFVQTSSPSNQSKVIVQRIPTTPTIKQTTTMVTRPVTPVTSNANKQQIKVIKTVPHIVSASLPTPSVQTRIRTTTPVKVTGEVHTTTNHQGQFLCEWRGCMRNFKSANEVYMHACESHCPSNGVQEMQCLWERCDAMKRKRFSLMTHLFDRHCNPDVLRMMAVRRRQLSQSGRSEIPAPAPPTPHPGYAPNAAFNAIKRHALEFVNPKELQQRLVSAAGNHQSAGNVDQDDNEGPVTKSIRLTSALILRNLVIYSSTGRWHLKRYEAHLSNIALSNVESSRTISQLLFDLCHSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00308617;
- 90% Identity
- iTF_00135940;
- 80% Identity
- -