Rmai008905.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- Arid2
- Assembly
- GCA_003676215.3
- Location
- NC:50995724-51016988[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-24 1e-20 73.3 0.0 1 89 15 101 15 101 0.94 2 2 5.7 8.4e+03 -3.3 0.0 32 45 660 673 651 679 0.76
Sequence Information
- Coding Sequence
- ATGGCCAGCGTCCTGAACAAAGATCCGGCCAACTACGCGAGGGAGAAGGCCAGCTTCCTCAGGGACCTGCAGCACTTCCACGACACCAGAGGAACACCAAGCCGTGTCTCGCCAAAAATAGATGGAAaagatattgatttatatctcCTATATGTTCTGGTCACTGCACAAGGAGGATGGGTTAAGGTTAACCAAAGAAACGACTGGAAAAATCTTTTGGAAAATTTTGATCTGCTTTCATCTTGTATTAATGCTGAAGTTGCATTGAAACAAATATACTTAAGgtatttagatcgttatgaaaaaattaactttttggGAGAAACTGGATCAATTGCTGGTGACGATGATGAAGATAGTAGACATAAAAAATGGTCTGCTAGAGCATTGCATTCTGTTCCTTTAGTTTATAATCACCATCAGCATGCTGTTAATGAACCTGTAAGAGCATTTCATGGTTTATCAACCAATCTCTACAAAGCAAgtgattatgaaaaattatctttatcatTGCTATCACCTTTACCTAATGAGCAAGACCTGGCTATTAATGTCTGCATACTGTTGTCCAATGAAAACAAGCATGCAATTAAGTTATCAAAGTGCCCTCAAATTCTTCACCATCTATTGGCTCATGCTGGTGTATTTACTCATTctgCTTCACGCAAATATTGGGATGATTACTATCGGAAAGTACGAAAATggtcaataaaatcattttggaAAGAAGTTCTTGATGAACAAGAACTTATGTATTTGACAGACGAAAGTCGTTTTTCTGCTCGAACCCCTAAAACTATACCACGTAAAGATGATGAGTCAAGTTCTTGTagcgatgatgatgatgattttagaaataataaagtgaaattaaattttgatccaTCTGACGATGAATTGTTTGGCCTCAAAAGGCCCCTTGGTACAGATGACCCATATGGTCAACGAGTATACCAAGTGGCATTAATACTCagaaatttgacattttttgaagaaaatatgaaagttaTGGGTCaagatttaacatttttaagatttgttTTGTTGTGTTGTGCTACAAGATGGAATTGTTTGCATCAAATTGGTTTTGAGATGTTAGGTAATATTGGACCTGTAGTACCTCTTGATGTTGGTTCATTACAGCATgctacattaaatattgtctgtaaaaatattactgaatCTAATGATCGTTCTATCATACTAAGTGCGGTCGAGGCTTTAAATAGAATGGGTTCTAAAGAATCAAatgaagaatttttattaaaaaatattaatcaaaagGTATACGATAAAATTTGTAACATGTTATCCTTGcatgatattatgttgttaataCAAACATTGGAATGTCTTTACTCATTGAGCTCACTTGGTGAACGTGCTTGTAATGCAATTGTTCATGTACATGGAGTTATTGATACTCTGGTGTCTTTAATTACTGTCGagGCACAGACATATGGTCCCAAAGCATGTATATTGATGAGAGTTATTGAGACTGTTACAACCCCTTCAACGACAACATTTGCTGCAGAATCAGCACCAAAGACACATATGATGGCAGCCCCAAGTGTTCCTCCACCTTCTAATGCATCCCAACATTTAATTTCGACTTTCACATCTCAGAATGTACTCCCACTACCCACACCAGCGGTGGCTAACCCTGTTATATTACCTAACGCTCCAAGTGCAGTACCTGTTATGTCTAcaacattaaatacttttacatCTGTAACACCAACTggaccaccaccaccactacCACCTCCTGTGCAATCAGTTGCTAGCCCTAAAATTATGGTtccagTTACTATGACTGTTACTACCAATTCAGCTGTGGTGTCTACAAACCAAACTTCTCCTAGCGTTCCTCAACCAGCCAATATGATCCAACAAGAAAATGAACAATTTGCTTTAAACTGGATTCGTGCTGTGCTTGAAGTATGCCCTACGCCTGGACGAGGAATTGATCAAGctgaattatataaactatacatgACTGCTTGTGCTAGAGCTGGAAGAAGAGGAGTTATTGCTCCACTTCATTTTCCACGTTGTGTCAAAGCTGTGTTTGGACCTGGTGTTGGACCTAAAAGTGTAAAGCTTGCACAAAGTCAGGGTGGAATAGCCATGGAACCGCCTACTCAAATTATTGCTTACGAAGGAATTCAGGTTCGATCAAAACCATTGTCATTCCCGATCAACACACCATTGGTTGTGACACAATCTACATCTGTAACACCATCGTCCATTCCTACCTCACCTATCCTTAAAGCACAACTCAGTGCACCAGCTACTAATGTCCAACAGAATTCTCCTTTAATTAAACGTGAAATCTTAGGAAagacAATACAGAATCCTGTATCATCCACAAGCACTGCAAATGAAACATCTGTCATTACTACAGTTGCGTCTGCTACTGTATCTCAATCTGAAGGaacattattatctaatagcAATACatctttaattaaaacattattagctAGCAAGGTATGCGATCCAAAGTTGAATGTGCCTTCTGCGACCATTAAACTTAGTAATAATGAGTCATGCACGTTATATGCTTCTTCTCAAAATTGCAATTCATCAGTAATTACTGagGTGGCTCAGCGTCAGCAACAacagaaaatattacaacaacaAAATAGTTCGACTACAACATTTGCTTCAGCATCATCAGTACCTAAGCAAACTGCAAGAATTAATGGTATCAGAACTACAACTCCAGATGATGTATGCAAAAATGATACAACTGTAACTGTGTCTAAATCAGAACAACAATCTGTAATTACAACAATTGCTtccagtaataaaatattggccAATAGCTTGAATAAACTTAATGATAAAGaTCAAAGTGAAACGATTTTACTGGAGCCAAAAAAGGAATCTCTTTTAAATGGAACTCCAGAGGTTACAGAAGTTAACGACATAGCATCGAAGAGTGTAATGTTATCAGGGCTATTAGATAAAGAAATTGAGAAAAAAGATGCACCATTTTTATTTGGATCAATACAAGTTGGGGACAATGGATTGGAATTAAATGGTGCATGCTCAGAAGCAAAAGAAAAATCAACACCtgcttgtattaaaattaaacaggaAGCAGGAGAAGAAAAACCTGGACAACAATTAGTTAAAGTGATTGTTGGAGGAAAACGGTCAGCTGATAAGGACATTCCTTGCGATCAAGCACCCAAAAAACCACATCTTAATGGTAACAGCAGTAGCAATGATGAAGAAAACATGGAGGTTGATGAAAGTAATATGAAAGCTTCTTCAACTGCTGCCAATCTTTATGCTGCTTTAGCAGCTGATGttctagaagatattgatggTTTAGATGATGAACCACCAAAAACAACTCCTGTTCCTCAACAGCAAATTCAAGTTAATACTCAACAGACAACTCAGCAAATTTTCCAAACCCCTGGCCAAATCATTGTATCGTCTTCAAATACTCAATGGCCATCAAATAATCAAAGAGGTATTGTAACAATGGTTCACCAAGGTAGTGCTGGTGGGCCACAATATGTTTTGGCACAACCTCAATCTGCTTTAGTACAAGGCCAAGCTCAAACTGTTCTTGTAGCCCAGACTACACCGCAAGGTTCAGGagctaaaacaattataattcttCAACAGCCTGCTGGAAATAATAGCCAATCATCTAACACTATGACTTTAAGTCAAACTAATTTTGTTCAAACTTCTTCACCGTCGAACCAATCTAAAGTAATTGTACAACGAATTCCAACAACACCAACTATTAAACAAACCACAACTATGGTGACTAGACCTTTAACGCCTGTCACTTCTAACGCTAATAAACAGCAAATTAAAGTCATTAAGACTGTACCTCATATTGTATCTGCCTCTTTGCCTACACCGTCCGTTCAAACTAGAATACGCACTACAACCCCAGTAAAGGTAACTGGGGAAGTCCATACCACTACCAATCATCAGGGACAGTTTTTATGCGAGTGGAGAGGTTGTATGCGTAATTTTAAATCGGCAAACGAGGTATACATGCATGCGTGCGAGTCTCATTGTCCTTCTAATGGTGTACAAGAAATGCAATGTTTATGGGAACGATGTGATGCTATGAAACGCAAGCGATTTTCATTAATGACACATTTATTTGATAGGCACTGTAATCCTgatGTATTGAGAATGATGGCAGTTCGAAGAAGACAATTGTCTCAAAGTGGTCGTAGTGAAATTCCAGCTCCAGCACCACCAACACCTCATCCTGGTTATGCACCGAATGCTGCCTTTAATGCTATTAAAAGACATGCATTAGAATTTGTTAATCCCAAAGAACTACAGCAAAGACTAGTGAGTGCGGCTGGCAATCATCAATCGGCTGGAAATGTCGATCAGGATGATAATGAAGGTCCTGTAACCAAGAGCATACGTCTAACGTCGGCACTTATATTGAGGAACCTAGTCATTTATTCTTCAACTGGAAGAtgGCATTTAAAACGATATGAAGCACACTTGTCAAATATAGCACTGAGTAATGTTGAATCTTCAAGAACAATTTCTCAgcttttatttgatttgtgtCATTCCAGCTGA
- Protein Sequence
- MASVLNKDPANYAREKASFLRDLQHFHDTRGTPSRVSPKIDGKDIDLYLLYVLVTAQGGWVKVNQRNDWKNLLENFDLLSSCINAEVALKQIYLRYLDRYEKINFLGETGSIAGDDDEDSRHKKWSARALHSVPLVYNHHQHAVNEPVRAFHGLSTNLYKASDYEKLSLSLLSPLPNEQDLAINVCILLSNENKHAIKLSKCPQILHHLLAHAGVFTHSASRKYWDDYYRKVRKWSIKSFWKEVLDEQELMYLTDESRFSARTPKTIPRKDDESSSCSDDDDDFRNNKVKLNFDPSDDELFGLKRPLGTDDPYGQRVYQVALILRNLTFFEENMKVMGQDLTFLRFVLLCCATRWNCLHQIGFEMLGNIGPVVPLDVGSLQHATLNIVCKNITESNDRSIILSAVEALNRMGSKESNEEFLLKNINQKVYDKICNMLSLHDIMLLIQTLECLYSLSSLGERACNAIVHVHGVIDTLVSLITVEAQTYGPKACILMRVIETVTTPSTTTFAAESAPKTHMMAAPSVPPPSNASQHLISTFTSQNVLPLPTPAVANPVILPNAPSAVPVMSTTLNTFTSVTPTGPPPPLPPPVQSVASPKIMVPVTMTVTTNSAVVSTNQTSPSVPQPANMIQQENEQFALNWIRAVLEVCPTPGRGIDQAELYKLYMTACARAGRRGVIAPLHFPRCVKAVFGPGVGPKSVKLAQSQGGIAMEPPTQIIAYEGIQVRSKPLSFPINTPLVVTQSTSVTPSSIPTSPILKAQLSAPATNVQQNSPLIKREILGKTIQNPVSSTSTANETSVITTVASATVSQSEGTLLSNSNTSLIKTLLASKVCDPKLNVPSATIKLSNNESCTLYASSQNCNSSVITEVAQRQQQQKILQQQNSSTTTFASASSVPKQTARINGIRTTTPDDVCKNDTTVTVSKSEQQSVITTIASSNKILANSLNKLNDKDQSETILLEPKKESLLNGTPEVTEVNDIASKSVMLSGLLDKEIEKKDAPFLFGSIQVGDNGLELNGACSEAKEKSTPACIKIKQEAGEEKPGQQLVKVIVGGKRSADKDIPCDQAPKKPHLNGNSSSNDEENMEVDESNMKASSTAANLYAALAADVLEDIDGLDDEPPKTTPVPQQQIQVNTQQTTQQIFQTPGQIIVSSSNTQWPSNNQRGIVTMVHQGSAGGPQYVLAQPQSALVQGQAQTVLVAQTTPQGSGAKTIIILQQPAGNNSQSSNTMTLSQTNFVQTSSPSNQSKVIVQRIPTTPTIKQTTTMVTRPLTPVTSNANKQQIKVIKTVPHIVSASLPTPSVQTRIRTTTPVKVTGEVHTTTNHQGQFLCEWRGCMRNFKSANEVYMHACESHCPSNGVQEMQCLWERCDAMKRKRFSLMTHLFDRHCNPDVLRMMAVRRRQLSQSGRSEIPAPAPPTPHPGYAPNAAFNAIKRHALEFVNPKELQQRLVSAAGNHQSAGNVDQDDNEGPVTKSIRLTSALILRNLVIYSSTGRWHLKRYEAHLSNIALSNVESSRTISQLLFDLCHSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00308617;
- 90% Identity
- iTF_00135940;
- 80% Identity
- -