Basic Information

Gene Symbol
Arid2
Assembly
GCA_949089665.1
Location
CARXXK010000001.1:147503855-147524532[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.7e-24 6.2e-20 73.3 0.0 1 89 15 101 15 101 0.94
2 2 7.1 5.1e+04 -3.3 0.0 32 45 659 672 650 678 0.76

Sequence Information

Coding Sequence
ATGGCCAGCGTCCTGAACAAAGATCCGGCCAACTACGCGAGGGAAAAGGCCAGCTTCCTCAGGGACTTGCAGCACTTCCACGACACCAGAGGGACACCAAGCCGTGTATCACCAAAAATAGATGGAAAAGACATCGATTTATATCTTCTATATGTTCTGGTCACCGCACAAGGAGGATGGGTCAAGGTTAACCAAAGAAATGATTGGAAAAATCTTTTGGAAAATTTTGATCTGCTGTCATCTTGTATAAATGCCGAAGTtgcattaaaacaaatatatctaAGgTACTTAGATcgttatgaaaaaattaattttttgggAGAAACCGGATCAATTGCTGGCGACGATGATGAAGATAGTAGACACAAAAAATGGTCTGCTAGAGCATTGCATTCTGTTCCTTTAGTTTATAATCATCATCAACATGCTGTTAATGAACCTGTAAGAGCATTTCATGGTTTATCAACCAATCTGTACAAAGCAAGTGATTATGAAAAATTGTCTTTATCGTTGCTATCACCTTTACCCAATGAGCAAGACCTGGCGATTAATGTTTGTATTCTGTTATCTAATGAAAACAAACATGCAATTAAGTTATCAAAGTGCCCACAAATTCTTCACCATCTCTTGGCTCATGCTGGTGTATTTACTCACTCTGCTTCTCGTAAGTATTGGGATGATTACTATCGAAAAGTTCGAAAATGgtcaataaaatcattttggaAAGAAGTTCTTGATGAACAAGAACTTTTATACTTGACAGACGAAAGCCGTTTTTCTGCTAAAACCCCTAAAACTGTACCACGGAAAGATGATGAGTCAAGTTCTTGtagtgatgatgatgatgattttGGAAACAataaagtgaaattaaattttgatcCATCTGATGATGAATTGTTTGGTCTCAAAAGGCCTCTTGGTACAGATGATCCATATGGGCAACGTGTATATCAAGTGGCCTTAATACTCagaaatttgacattttttgaagaaaatatGAAAGTTATGGGTCAAGACTTAACATTTCTaagatttgttttattgtgtTGTGCAACAAGATGGAACTGTTTGCATCAAATTGGTTTTGAGATGTTGGGTAATATTGGACCTGTAGTACCTCTTGATGTTGGTTCATTACAGCATGCAACATTAAATATTGTCTGTAAAAACATAACTGAATCTAATGATCGTTCTATCATATTAAGTGCGATTGAAGCTTTAAACAGAATGGGCTCTAAAGAATCAAATGaagaatttttattgaaaaatattaatcaaaagGTATacgataaaatatgtaacatgttaTCCTTGcatgatattatgttgttgaTACAAACATTGGAATGTCTTTACTCATTGAGCTCACTTGGTGAGCGTGCTTGTAATGCAATTGTTCATGTACATGGAGTTATTGATACTCTGGTGTCTTTAATTACTGTCGAGGCACAGACATATGGTCCCAAAGCGTGTATATTGATGAGAGTTATTGAGACTGTTACAACTCCTTCGACCACAACATTTGCTGCAGAGTCAGCACCAAAGACACATTTGATGGCAGCTCCTAGTGTTCCTCCACCTTCTAATGCATCCCAGCATCTAATTTCGACTTTTGCATCTCAGAATGTACCCCCCTTACCAACACCGGCGGTTGCTAACCCTGTTATATTACCTAATGCTCCAAGTGCAGTACCTGTTATGTCTAcaactttaaatacttttacatCTGTAACACCAACTgggccaccaccaccaccaccacccgTGCAATCAGTTGCGAGCCCCAAAATGATGGTTccagttaCTATGACTGTTACAACCAATTCAGCTTTAGTGTCTACAAACCAAACTTCTCCTAGTGTTCCTCAACCCGCTAATATGATTCAACAAGAGAATGAACAATTTGCATTAAACTGGATTCGTGCTGTGCTTGAAGTGTGTCCTACTCCTGGGCGAGGAATTGATCAAgctgaattatataaattatacatgacTGCTTGTGCTAGAGCTGGAAGAAGAGGAGTTATTGCTCCACTTCATTTTCCACGTTGTGTCAAagctGTGTTTGGACCTGGtgttggaccaaaaagtgtaaaacttGCACAAAGTCAGGGTGGCATAGCTATGGAGCCACCCACTCAAATTATTGCATACGAAGGAATTCAGGTTCGATCAAAACCATTGTCATTCCCGATCAACGCACCAATGGTTGTGACACAATCTACATCTGTAACACCCTCGTCCGTTCCTACCTCACCTATCCTTAAAGCACAACTCAGTGCACCAACTACTAATGTCCAACAGAATTCTCCTTTAATTAAACGTGAAATCATAGGAAAGaccaTACAGAATCCTGTATCATCCACAAGCATTACAAATGAAACATCGGTCATCACTACAGTTGCATCTGCTACTTTATCTCAATCTGAAGGAACATTATTATCTAATAGCAATACAtctttaattaaaacattattagcTAGCAAGGTATGCGATCCAAAACTGAATGTGCCTTCTGCGACCATTAAACTTAGTAATAATGAGTCATGCACGTTATATGCTTCTTCTCAAAATTGCAATTCTTCAGTAATTACTGAGGTGGCTCAGCGTCAGCAacaacagaaaatattacaacaacaaaataGTTCTACTACATTTGCTTCAGCATCATCGATAGTACCTAAGCAAACTGCCAGAATTAATGGTATCAGAACTACTTCAGATGAGGTATGTAAAAATGATATGGGCGTAACTGTGTCTAAATCAGAACAGCATCAACAGTCTGTAATTACAACAATTGCTTCCAGTAACAAAATGTTGACCAATAGCTTGAATAAACTTAGTGATAAAGATCAATGCGAAATGACTTTACTGGAGCCAAAAAAAGAATCTCTCCTAAATGGAACTCCAGATGTATCAGAAGTAAACGACATAGCCTCAAAAAGTGTAATGTTATCAGGGCTATTAGATAAAGAGATTGAGAAAAAAGATGCTCCATTTTTATTTGGATCAATACAAGTTGGAGACAATGGATTGGAATTAAACGGTGCTTGCTTAGAAGCAAAAGAAAAATCAACAGCtgcttgtattaaaattaaacaggAAGTCGGAGAAGAAAAGCCTGGACAACAACTAGTTAAAGTAATTGTTGGAGGTAAACGGTCAGCTGAAAAAGACATTTCTTGTGATCAAGCACCTAAAAAACTACATCTCAATGGTAACAGTAGTAGTAATGACGAGGAAAACATGGAGGTTGATGAAAGTAATATGAAAGCATCTTCCACTGCTGCCAATCTTTATGCTGCTTTAGCAGCTGATGTTTTAGAGGATATTGATGGTTTAGATGATGAACCACCAAAACCAATTCCTACTCCTCAACAACAAATTCAAGTGAATACTCAACCCACAACTCAACAAATTTTTCAAACCCCAGGGCAAATCATTGTATCGTCTTCAAACACTCAATGGCCATCAAATAATCAAAGAGGCATTGTGACAATGGTTCATCAAGGTAGTGCTGGTGGGCCACAATATGTTTTGACCCAACCTCAGTCTGCTTTAGTACAAGGTCAAGCTCAAACTGTTCTTGTAGCTCAGACTACACCCCAAGGTTCAGGAgctaaaacaattataattcttCAACAGCCTgctggaaataataatcaatcGCCCAACACTATGACTTTAAGTCAGACTAATTTTGTTCAAACCTCTTCGCCTTCAAACCAATCTAAAGTAATTGTACAACGAATTCCAACAACTCCTACTATCAAACAAACCACAACTATGGTGACTAGACCTATAACACCAGTCACTTCTAACGCTAATAAACAGCAAATTAAGGTCATTAAGACTGTACCTCATATTGTATCTGCCTCTATGCCTACACCGTCCATTCAAACTAGGATACGCACTACTACTCCTGTAAAGGTTACTGGGGAAGTCCACACCACTACTACCAATCATCAAGGACAATTTTTATGCGAGTGGAGAGGGTGTATGCGTAATTTTAAATCTGCTAACGAGGTATATATGCATGCATGTGAGTCTCATTGTCCATCTAATGGTGTGCAAGAAATGCAATGTTTATGGGAACGATGTGATGCTATGAAACGCAAGCGATTTTCATTAATGACACACTTATTTGATAGGCACTGTAATCCTGATGTATTGAGAATGATGGCTGTTCGAAGAAGACAATTGTCTCAAAGTGGTCGTAGTGAAATACCAGCTCCAGCACCACCAACGCCTCATCCTGGTTATGCACCTAATGCTGCCTTTAATGCTATTAAAAGGCATGCATTGGAGTTTGTTAATCCCAAAGAACTACAGCAAAGACTAGTGAGTGCGGCTGGCAATCATCAATCGGCTGGAAATGTCGATCAGGATGATAATGAAGGTCCAGTAACCAAGAGCATACGTCTAACGTCAGCACTTATTTTAAGAAACCTAGTAATTTATTCTTCGACTGGAAGATgGCATTTAAAACGATATGAAGCACACTTGTCAAATATAGCACTGAGTAATGTTGAATCGTCAAGAACAATTTCCCAGCTTTTATTTGATTTGTGTCATTCCAGCTGA
Protein Sequence
MASVLNKDPANYAREKASFLRDLQHFHDTRGTPSRVSPKIDGKDIDLYLLYVLVTAQGGWVKVNQRNDWKNLLENFDLLSSCINAEVALKQIYLRYLDRYEKINFLGETGSIAGDDDEDSRHKKWSARALHSVPLVYNHHQHAVNEPVRAFHGLSTNLYKASDYEKLSLSLLSPLPNEQDLAINVCILLSNENKHAIKLSKCPQILHHLLAHAGVFTHSASRKYWDDYYRKVRKWSIKSFWKEVLDEQELLYLTDESRFSAKTPKTVPRKDDESSSCSDDDDDFGNNKVKLNFDPSDDELFGLKRPLGTDDPYGQRVYQVALILRNLTFFEENMKVMGQDLTFLRFVLLCCATRWNCLHQIGFEMLGNIGPVVPLDVGSLQHATLNIVCKNITESNDRSIILSAIEALNRMGSKESNEEFLLKNINQKVYDKICNMLSLHDIMLLIQTLECLYSLSSLGERACNAIVHVHGVIDTLVSLITVEAQTYGPKACILMRVIETVTTPSTTTFAAESAPKTHLMAAPSVPPPSNASQHLISTFASQNVPPLPTPAVANPVILPNAPSAVPVMSTTLNTFTSVTPTGPPPPPPPVQSVASPKMMVPVTMTVTTNSALVSTNQTSPSVPQPANMIQQENEQFALNWIRAVLEVCPTPGRGIDQAELYKLYMTACARAGRRGVIAPLHFPRCVKAVFGPGVGPKSVKLAQSQGGIAMEPPTQIIAYEGIQVRSKPLSFPINAPMVVTQSTSVTPSSVPTSPILKAQLSAPTTNVQQNSPLIKREIIGKTIQNPVSSTSITNETSVITTVASATLSQSEGTLLSNSNTSLIKTLLASKVCDPKLNVPSATIKLSNNESCTLYASSQNCNSSVITEVAQRQQQQKILQQQNSSTTFASASSIVPKQTARINGIRTTSDEVCKNDMGVTVSKSEQHQQSVITTIASSNKMLTNSLNKLSDKDQCEMTLLEPKKESLLNGTPDVSEVNDIASKSVMLSGLLDKEIEKKDAPFLFGSIQVGDNGLELNGACLEAKEKSTAACIKIKQEVGEEKPGQQLVKVIVGGKRSAEKDISCDQAPKKLHLNGNSSSNDEENMEVDESNMKASSTAANLYAALAADVLEDIDGLDDEPPKPIPTPQQQIQVNTQPTTQQIFQTPGQIIVSSSNTQWPSNNQRGIVTMVHQGSAGGPQYVLTQPQSALVQGQAQTVLVAQTTPQGSGAKTIIILQQPAGNNNQSPNTMTLSQTNFVQTSSPSNQSKVIVQRIPTTPTIKQTTTMVTRPITPVTSNANKQQIKVIKTVPHIVSASMPTPSIQTRIRTTTPVKVTGEVHTTTTNHQGQFLCEWRGCMRNFKSANEVYMHACESHCPSNGVQEMQCLWERCDAMKRKRFSLMTHLFDRHCNPDVLRMMAVRRRQLSQSGRSEIPAPAPPTPHPGYAPNAAFNAIKRHALEFVNPKELQQRLVSAAGNHQSAGNVDQDDNEGPVTKSIRLTSALILRNLVIYSSTGRWHLKRYEAHLSNIALSNVESSRTISQLLFDLCHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00308617;
90% Identity
iTF_00135940;
80% Identity
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