Basic Information

Gene Symbol
Arid2
Assembly
None
Location
scaffold251:339366-358413[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-25 8.4e-22 77.9 0.0 1 89 15 101 15 101 0.95
2 2 4.5 1.6e+04 -3.2 0.0 32 45 655 668 645 675 0.76

Sequence Information

Coding Sequence
ATGGCTAGCGTCCTGAACAAAGATCCGGCCAGCTATGCTAAGGAAAAATCCAGTTTCCTCAGGGATTTGCAGCATTTTCACGACACTAGAGGAACGCCGAGTCGTGCTCCACCTAAAATTAATGGACATGAAATCGACTTGTACCTTTTATATGTTCTCGTCACAGCACAAGGAGGATGGGTTAAGGTGAATCAAAGAAATGATTGGAAAAATCTTTTAGAAAATTTTAATCTGAATTCTTCTTGTGTGAATGCTGAAGTTGCCTTAAAACAAATATATTTAAGATATTTGGACCGTTATGAAAAAATTAATTTTTTGGGGGAAACTGGATCAATCGCAGGTGATGATGATGAAGATAGTAGACATAAAAAATGGTCAGCTAGAGCTTTACACTCTGTTCCTTTAGTTTATAATCATCATCAGCATTCTGTAACTGACCAAGTAAGAACATTTCATGGTCTGTCAACTAATTTATACAAGCCAAGTGACTATGACAAGTTATCATTATCGCTGCTATCACCATTGCCAAATGAACAAGACTTGGCAATAAATGTTTGTATTCTTCTGTCCAATGAAAACAAACATGCTATTAAACTGTCTAAATGTCCAAAAATACTTCATCACCTTCTAGCTCATGCTGGAGTATTTACTCATCCTGCTTCTCGAAAATATTGGGAAGAATATTATCAAAAAGTTCGCAAATGGTCTTATAAAACTTTTTGGAAAGAAGTTTTGGATGAAAAAGAGCTTTTATATTTGACAGATGAGAATCGTTTTTGCGCACGAACACAAGAAGCTCCTCCACGTAGAGATGATGATTCAAGCACTTGTAGTGATGACGAAGATGAAATTAGAAACAAAGTTAAATTGAACTTTGATTCTTCTGATGATGAGTTATTTAGCCTCAAAAGGCCTCTTGGGACAGATGATCCTTATGGCCAACGAGTGTACCAAGTTGCCCTGATTCTTAGAAATTTAACTTTTTTTGATGAAAATATGAAAGTGATGGGACAAGATTTGACATTTTTGAGATTTGTGTTGTTGTGTTGTGCAACACGCTGGAATTGTTTACATCAGATTGGATTTGATATGCTGAGTAATATTGGACCAGTTGTTCCTCTGGATGTTGGTTCTCTACAACATGCCACATTAAACATTGTTTGTAAAAATATCACTGAATCTAATGATCGTGCAGTTATTCTAGGCGCTGTTGAAGCTTTAAACAAAATGGGTACTAAAGAATCAAACGAGGAATTTTTGTTGAAAAATATAAATCAAAATGTATATAATAAAATTTGCAATATGCTATCATTACATGATATTATGCTGTTAATACAAACATTAGAATGCTTATATTCTTTAAGTTCCCTCGGTGAACGTGCTTGTAATGCAATTGTTCATGTGCATGGTGTGATCGATACACTAGTTTCTTTAATTACAGTTGAGGCACAAGCATATGGTCCAAAGGCTTGTATACTTATGAGAGTTATTGAGACTGTCTCAGCTCCAACATCAACAACATATATACCAGAACCAACTACTAAAACTACTGCAATGGCTGCTCCTAGTGCACCACCTCCTTCAGTTACATCTCAACAATTACTTTCAACTTTTTCATCGCAAAATGTGTTACCTTTACCAACTCCAGCTGTTGCTAATCCTGTCATATTACCAAATGCTCCTAGTGCTGTGCCAGTCATGTCATCATCTCTTAATACTTTCACATCAGTGGCTCCAACTGGATTACCTCTTGTACAATCAGTTTCAAGCCCTAAAATTATTGTATCAGCTTCATTACCTATCACAACTACTAGTACTACTTTGGTGACTTCTAATCAAACATCTACAACTATTTCACAACCAGCTAATTTGATTCAACAAGAAAACGAACAATTTGCTTTAAACTGGATCCGAGCTACTCTTGAAGTTTGTCCTACACCAGGAAGAGGTATAGATCAAGCTGAATTGTATAAACTTTACATGACAGCTTGTGCAAGAGCTGGTCGAAGAGGAGTTATTGCACCATTACATTTTCCTCGTTGTGTAAAAGCTGTATTTGGACCTTCTGTTGGACCTAAAAGTGTAAAATTGGCTCAAAGTCATGGTGGCATTGCAATGGATCCACCTACTCAAATTATTGCTTATGAAGGAATTCAGGTTCGAGCTAAACCATTGCCATTAACAATCAGTAGTACTACAATGATTGTAACACAAACATCATCTGTGGTGACAACTCCATCTATTCCAACCTCACCTATCCTTAAAGCACAGCTTAGTGCACCAGCTGCTAACCCTCAACAAAATACACCATTAATCAAACGAGAAATCCTTGGAAAGACTGCGCACAATTCTAACCTAGCTAGTAATACGGGAACTGAGATACCTGTTATCACTACAGTAGTATCATCAACTGTATCACAATCAGATGGAACCATGTTATCAAATTGCAATACTTCTTTAATAAAAACATTATTAGCTAGCAAGGTATGCGATCCTAAATCAACTGTACCTTCTGCAACAATTAAACTTAGCAATAATGAGTCTTGCACGTTGTATGCTTCCTCCCAAAACTGCAAAAGTACTGTAATAACAGAGGTAACACAACGGCAACAACAACAACAGAAAATATTACAACAACAAACCAGCTCAGTTACTTCACCTACTTTACCATCGGTTGTACCTAAGCAAATTCCCAAAATAAATGGAATTCGTGTTTCTTCTGTAGAAGATGTACTAAAAAATGACTGCAACATTATTACAAAATCTGATAATCAATCATCTGTCATTACTACTATTGCATCAAATAATAAAGTTTTTGTTAACAGTATTACAGAAAAATCTACAGAAGATAAAAATGATGCAGTTTATGTTGATAGCAAGAAAGAATTTCTAATAAATGGAACACCAGAAATTTCTGAAATCAATAATGTTGCATCTAAAAGTGTAACATTATCAGGGCTGTTAGATAAGGAAATAGAAAAAAAGGATACCCCATTTCTCTATGGCTCTATTCAAGTAGGAGAAAATGGATTAGAATTAAATGGCGCAGAATGCACCCAAAAAAGATCATCTGATGAAGTATTTTTGACGGGTAGTTCAAAAGTTAAACAAGAACAAACCGATGAGAATGGACAACAGTTATCAAAAGTTGTTGGTGTTAAAAGACCGTCTGAAGAAGAAATTCCATGTGATCAAGCACCAAAAAAACCACATATTAATGGTAATAGTAGTGGAAATGATGATGATAATATAGAAATTGATGAAAGTAATGTTAAAGCTTCTTCAACTGCTGCTAATTTATATGCTGCTTTAGCAGCAGATGTGTTAGAAGACATTGATGGTTTGGAAGATGAGCCTGTAAAACCTCCTTCAGTACTATCTCAACAAGTTCAAGTCAATCAAGCTGTAACAACTCAACAAATTTTTCAAAGTCCTGGTCAAATTATTGTCTCGTCTGCTAATGCTCAGTGGACTTCAAATAATCAAAGAGGTATTGTGACAATGGTACATCAAGGTAATGCTAGTGGTCCTCAATATGTATTGGCTCAACCACAATCAGCACTTGTACAGGGTCAAGCACAAACTGTGTTGGTTGCTCAAACTACACCTCAAGGTTCAGGAGCTAAAACAATTATAATTCTTCAACAGCAGCCTGGAAGTAACAGTCAATCACCAAATACTGTAACTTTGAGCCAGGCCAACTTTGTTCAAAACTCACCACAAATGAATCAATCAAAAGTTATTGTTCAAAGAATACCAACACCTCCTTCTATTAAGCAACAAGTTACTACTGTTGCAGCAAGACCTGTAACCCCTGTTACATCTGTGGCTACTAAACAACAGCAAGTAAAAGTTATTAAAACCGTACCTCATATAATTTCTGCTACAATGCCTTCTCCTAATGTTCAAACAAAAATTAGAACAACTACTCCAATTAAAGCAACTGGAGGAGAAGTTCAAACCATTACTAATCAAGGCCAATTTTTATGTGAATGGCGTGGGTGCATGAGAAATTTTAAATCTGCCAATGAAGTTTACATGCATGCTTGTGAATCCCATTGTCCATCAAATGGAGTACAAGAAATGCAGTGTTTATGGGAACGATGTGACTCTATGAAGCGAAAACGGTTTTCATTAATGACACATTTATATGATCGACATTGTAATCCTGATGTATTAAGAATGATGGCAGTTCGTAGGCGGCAACTTTCTCAAAGTGGTCGTAGTGAAATACCAGCTCCTGCTCCACCTACTCCTCATCCAGGTTATGCTCCTAATGCAGCATTCAATGCTATCAAAAGGCATGCATTAGAATTTGTTAATCCCAAAGAACTTCAGCAAAGACTAGTTAGTGCGGCAGGAAACAATCAATCGGCTAGCAATGTCGATCAGGATGATAATGAAGGTCCAGTCACAAAAAGCATTCGCCTGACCTCAGCATTAATTTTACGAAACCTAGTCATATATTCCTCAACTGGAAGATGGCATATAAAACGTTATGAAGCTCATTTATCTAATATTGCTTTAAGTAATGTTGAATCATCAAGAACAATTGCACAGTTATTATTTGATTTGTGTCATTCCAGTTGA
Protein Sequence
MASVLNKDPASYAKEKSSFLRDLQHFHDTRGTPSRAPPKINGHEIDLYLLYVLVTAQGGWVKVNQRNDWKNLLENFNLNSSCVNAEVALKQIYLRYLDRYEKINFLGETGSIAGDDDEDSRHKKWSARALHSVPLVYNHHQHSVTDQVRTFHGLSTNLYKPSDYDKLSLSLLSPLPNEQDLAINVCILLSNENKHAIKLSKCPKILHHLLAHAGVFTHPASRKYWEEYYQKVRKWSYKTFWKEVLDEKELLYLTDENRFCARTQEAPPRRDDDSSTCSDDEDEIRNKVKLNFDSSDDELFSLKRPLGTDDPYGQRVYQVALILRNLTFFDENMKVMGQDLTFLRFVLLCCATRWNCLHQIGFDMLSNIGPVVPLDVGSLQHATLNIVCKNITESNDRAVILGAVEALNKMGTKESNEEFLLKNINQNVYNKICNMLSLHDIMLLIQTLECLYSLSSLGERACNAIVHVHGVIDTLVSLITVEAQAYGPKACILMRVIETVSAPTSTTYIPEPTTKTTAMAAPSAPPPSVTSQQLLSTFSSQNVLPLPTPAVANPVILPNAPSAVPVMSSSLNTFTSVAPTGLPLVQSVSSPKIIVSASLPITTTSTTLVTSNQTSTTISQPANLIQQENEQFALNWIRATLEVCPTPGRGIDQAELYKLYMTACARAGRRGVIAPLHFPRCVKAVFGPSVGPKSVKLAQSHGGIAMDPPTQIIAYEGIQVRAKPLPLTISSTTMIVTQTSSVVTTPSIPTSPILKAQLSAPAANPQQNTPLIKREILGKTAHNSNLASNTGTEIPVITTVVSSTVSQSDGTMLSNCNTSLIKTLLASKVCDPKSTVPSATIKLSNNESCTLYASSQNCKSTVITEVTQRQQQQQKILQQQTSSVTSPTLPSVVPKQIPKINGIRVSSVEDVLKNDCNIITKSDNQSSVITTIASNNKVFVNSITEKSTEDKNDAVYVDSKKEFLINGTPEISEINNVASKSVTLSGLLDKEIEKKDTPFLYGSIQVGENGLELNGAECTQKRSSDEVFLTGSSKVKQEQTDENGQQLSKVVGVKRPSEEEIPCDQAPKKPHINGNSSGNDDDNIEIDESNVKASSTAANLYAALAADVLEDIDGLEDEPVKPPSVLSQQVQVNQAVTTQQIFQSPGQIIVSSANAQWTSNNQRGIVTMVHQGNASGPQYVLAQPQSALVQGQAQTVLVAQTTPQGSGAKTIIILQQQPGSNSQSPNTVTLSQANFVQNSPQMNQSKVIVQRIPTPPSIKQQVTTVAARPVTPVTSVATKQQQVKVIKTVPHIISATMPSPNVQTKIRTTTPIKATGGEVQTITNQGQFLCEWRGCMRNFKSANEVYMHACESHCPSNGVQEMQCLWERCDSMKRKRFSLMTHLYDRHCNPDVLRMMAVRRRQLSQSGRSEIPAPAPPTPHPGYAPNAAFNAIKRHALEFVNPKELQQRLVSAAGNNQSASNVDQDDNEGPVTKSIRLTSALILRNLVIYSSTGRWHIKRYEAHLSNIALSNVESSRTIAQLLFDLCHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00308617;
90% Identity
-
80% Identity
-