Basic Information

Insect: Campoletis raptor
Gene Symbol: Prdm15
Assembly: GCA_948107755.1
Location: OX403630.1:16365090-16369071[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.1 1.8e+02 2.8 0.0 2 23 252 273 251 273 0.93

2 13 0.0031 0.26 11.7 1.6 3 19 282 298 281 303 0.94

3 13 4.8e-06 0.00041 20.6 1.4 1 23 462 484 462 484 0.99

4 13 0.0053 0.45 11.0 0.2 1 20 488 507 488 508 0.95

5 13 0.00071 0.06 13.7 3.4 1 23 518 540 518 540 0.98

6 13 5.4e-05 0.0046 17.3 5.9 1 23 569 591 569 591 0.96

7 13 3.3e-05 0.0028 17.9 1.5 3 23 613 633 612 633 0.98

8 13 0.15 13 6.4 2.9 1 23 638 660 638 660 0.97

9 13 0.00052 0.044 14.2 0.1 2 23 666 687 665 687 0.95

10 13 0.055 4.7 7.8 7.2 1 19 692 710 692 715 0.89

11 13 0.0011 0.091 13.2 2.1 1 23 721 743 721 743 0.97

12 13 0.00016 0.013 15.8 5.4 1 23 749 772 749 772 0.97

13 13 0.027 2.3 8.7 4.5 1 23 777 800 777 800 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.1	1.8e+02	2.8	0.0	2	23	252	273	251	273	0.93
2	13	0.0031	0.26	11.7	1.6	3	19	282	298	281	303	0.94
3	13	4.8e-06	0.00041	20.6	1.4	1	23	462	484	462	484	0.99
4	13	0.0053	0.45	11.0	0.2	1	20	488	507	488	508	0.95
5	13	0.00071	0.06	13.7	3.4	1	23	518	540	518	540	0.98
6	13	5.4e-05	0.0046	17.3	5.9	1	23	569	591	569	591	0.96
7	13	3.3e-05	0.0028	17.9	1.5	3	23	613	633	612	633	0.98
8	13	0.15	13	6.4	2.9	1	23	638	660	638	660	0.97
9	13	0.00052	0.044	14.2	0.1	2	23	666	687	665	687	0.95
10	13	0.055	4.7	7.8	7.2	1	19	692	710	692	715	0.89
11	13	0.0011	0.091	13.2	2.1	1	23	721	743	721	743	0.97
12	13	0.00016	0.013	15.8	5.4	1	23	749	772	749	772	0.97
13	13	0.027	2.3	8.7	4.5	1	23	777	800	777	800	0.95

Sequence Information

Coding Sequence: ATGCCACCTTTGAGAAAACTTTCGACAATTCCAGATGCAATAGTGTCGATAAATGATACGAAAAATAATGAGAAAATCACGGTCGAATCTTTTTTGACAGTTTGTAGTGTTTGTGGCCAGGAGCATGCAACAACGAGCTGTAAATTTTTGCCCAACCTGAAATATGTGAAGGATGAACCGTTGCGCTCCAGGGCCAGACTGACCTTGCCTAAAAATCTGGAAATCACAAAAATGGCTGACGGTTCTATGACGGTGATAGCAAAATGTGATTTCCAGCAGGGAACAACTTTTGGTCCGTTGGAAGCTCAACGAGACTGGACTATGAATCCTATGAACGATTTTCCCATTAAAGTTTTTGGGAATGGTCCGACAGATACTTTTCATTTGGACCGTACCAATGAAGATGCATCAAATTGGATGTGCTTTGTTTCTCCTGCATCTAGTTCTTTGGAACAGAATCTGGTTTGTTATCAGATGGAGAGTGACGTGTATTACACGGCTATGCGATTCATTCCATCTGGTGAAGAACTGAGGGTTTGGTACGCTCCTTATTATGCTTTGAAAATGAAAATGCCATTGTTCAACACAGAATTTGCAAATATCACCGAATATTTAGCAAAGGAGGATAATGAGCTCTATCGGCCTGACGACGATACAGTAAATCATTCAGGAAATTCAAATGAAAATATTGAAGAAATCGTGCAACGTTTACCAGCCGAACAACTGGGAGCCCGGGGCGACAAAACTAGCTGGAATTGTACGATATGCTCGGTCGTAATAAATTCGGTAATCGAGTATGCGAAACACTTGATGGAACATTACAAACCTCTGTCTGGAGTATTTTGCGAAATTTGTAATAAAAAATTTTACAGACTCTCGGTTTTGCAAAAACACAAGTGGTCGAAACATCCCGAAGAAAGAACGAACAACGACGTTGTTGGTATTCCTACGTCGGAAAATCAGCAACAGCAAAACGCTCAGACGATACTCATGAATATGAGCGATTCCGAGGGCCAAACTTCGGAAGCAATGAAAGACATACTTGAAAAATTCAAAGCAGGAAAGTCATTGACCGAATGCAATTTACTGCCCTCGGGGATTAAAGCAGAAAAAGAAAACCCCAACGAATTATCTCTTCTTGACGCACATTCCATAAGCGTCAATGATCTCCTTCAGAACAACGCCACATTGATAGAAAATTCCTCGTTGAAATCAATCTTGGAAAATCAATGCTTAAACATGAGTCTAGAGGCAATTACGGACTCGATGCTCTCGGATAATATAAACGGCACCGATTCCGTCAAATTCAACGTCGAGGAATTAACTTCGGAGTTTTTGGACATAACACCTGAAGTTGAAAGTATTAATCGTAGAATTGTCAATTTCCAATGCGACATATGCGAAAAAAAGTTTGGAAAGGCTGATTATCTCTATCGACACTTGAGAAAACACACCGGCGAGTTTATCTGTCCAAATTGTTTGGGTGTATTCGCGCGAAAAGAAAATTTGATCTCGCATCTGTGCCCTTCCCGAAAGTTTGATCACAGAAAATACGAGTGTTCCTATTGCCAGAAACTTTTTTTAACAAAGAAATATCTCAAACGTCACATGGTGAAACACACCGATTCGAACACTTGCAAATGGTGTAGGAATTTGTTTACTTCGAGGCTGGAAATCGAGGCTCACAAGTGTCAAGCTCCGAAACACATTTGTTCTCAATGTGGCAAACGATTCGTTCACCGGGAGCATCTCAATCGACATGCCAAATTACACACGAATTCTAAACCAGTAGCAAAGAAAGCGAAGAAGAGAGCTCTGGAGGAAAAACCAGCAATATGCGAGAAGTGTGGTGATGTTTTTAAAAATCCGCACAGTTTGAAGCAACATTTGCGATCGCACGGAGAGAGAAAATTCGAGTGCGACATTTGCCACAGTAAATTTCACAGAATCGGCGTATTGCAACAACACAAATCAATACATGAGAGTATTCAGGTACCCTGTCAAATTTGTGGAAAAAAATTAAAGAGCAAAAAGGCATTGAGCGTTCACGTACTTTTGCATGGTAACAGAAAATTCCATTGCGAAAAGTGTGACAAAAGTTTCTTTCAAAGGTGCAATTATTTAAAACACGACAGACAAATGCACAGTGACAAAGTATTGCACAAATGCCCTCATTGTCCGGCCGAATTTACGAGCGAATTGAGTTTCAATAAACACGTCGAGAGTCACATTAAACCGACTGATTACGCGTGTACCTCTTGCCACAAAGTTTTCCATCGGGAGTATCAATTGAAGCGGCACGTTCAGACAAATCATAGCGGAATAGTGTACCGTTGTCCTTACTGTAAAATGACGGCTCGATACCGTCACAGTATGAGAAGGCATTTTGAGCGTCAACATAAAAGTCTCAGCAACGAATGGAACAAACCAGGTTTCGTCAATGATCTCGTTGAAAAAACTTCGTCCTCTATGTTGATCGAGCGAGCTATCGCACCGGTTCAAAGCAACCAAGTTCTTCAATTGCCGCACAATAAAAATAATGCGAAAATTGAGGAAACCAACGATCCTCACAGTTTGATCATTTCGGTGGAGAACTTGAACGATGCGCAATTCGACAGAAAGGCACAACAGATTGTAAATAAAGTCCAGGACGAGGTGGAATCGGGTTCATTGAACGGTCAAGAAATTTTGCTTCGGGTACCAGAAATGGACGAGGCTGAATCAACGATCCAAAATAACGAATTGACGTCCAGCGAAGTTCCCCAATTGAGTATCAGCGATAACGATGCAAATCTGACGGAATCTGTACTGGGCAACGCTTATATATTCGGTGAGGACGGCGGCGACATAATGTTTTATGTTTTGGACAATACCCCCGTTATCACTGAATATTAA
Protein Sequence: MPPLRKLSTIPDAIVSINDTKNNEKITVESFLTVCSVCGQEHATTSCKFLPNLKYVKDEPLRSRARLTLPKNLEITKMADGSMTVIAKCDFQQGTTFGPLEAQRDWTMNPMNDFPIKVFGNGPTDTFHLDRTNEDASNWMCFVSPASSSLEQNLVCYQMESDVYYTAMRFIPSGEELRVWYAPYYALKMKMPLFNTEFANITEYLAKEDNELYRPDDDTVNHSGNSNENIEEIVQRLPAEQLGARGDKTSWNCTICSVVINSVIEYAKHLMEHYKPLSGVFCEICNKKFYRLSVLQKHKWSKHPEERTNNDVVGIPTSENQQQQNAQTILMNMSDSEGQTSEAMKDILEKFKAGKSLTECNLLPSGIKAEKENPNELSLLDAHSISVNDLLQNNATLIENSSLKSILENQCLNMSLEAITDSMLSDNINGTDSVKFNVEELTSEFLDITPEVESINRRIVNFQCDICEKKFGKADYLYRHLRKHTGEFICPNCLGVFARKENLISHLCPSRKFDHRKYECSYCQKLFLTKKYLKRHMVKHTDSNTCKWCRNLFTSRLEIEAHKCQAPKHICSQCGKRFVHREHLNRHAKLHTNSKPVAKKAKKRALEEKPAICEKCGDVFKNPHSLKQHLRSHGERKFECDICHSKFHRIGVLQQHKSIHESIQVPCQICGKKLKSKKALSVHVLLHGNRKFHCEKCDKSFFQRCNYLKHDRQMHSDKVLHKCPHCPAEFTSELSFNKHVESHIKPTDYACTSCHKVFHREYQLKRHVQTNHSGIVYRCPYCKMTARYRHSMRRHFERQHKSLSNEWNKPGFVNDLVEKTSSSMLIERAIAPVQSNQVLQLPHNKNNAKIEETNDPHSLIISVENLNDAQFDRKAQQIVNKVQDEVESGSLNGQEILLRVPEMDEAESTIQNNELTSSEVPQLSISDNDANLTESVLGNAYIFGEDGGDIMFYVLDNTPVITEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509098; iTF_01299534; iTF_00265976; iTF_00266703; iTF_00263775;
90% Identity: iTF_00263775;
80% Identity: -