Basic Information

Insect: Campoplex capitator
Gene Symbol: Prdm15
Assembly: GCA_037576405.1
Location: JARBWI010000004.1:1423714-1427603[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.4 4.9e+02 1.9 0.0 2 23 253 274 252 274 0.91

2 14 0.0024 0.27 12.1 4.5 3 23 283 304 282 304 0.96

3 14 5e-06 0.00056 20.6 1.4 1 23 464 486 464 486 0.99

4 14 0.0054 0.6 11.0 0.3 1 20 490 509 490 510 0.95

5 14 0.00034 0.038 14.8 3.2 1 23 520 542 520 542 0.98

6 14 3.2 3.5e+02 2.3 1.0 2 20 547 565 547 567 0.92

7 14 5.6e-05 0.0063 17.3 5.9 1 23 571 593 571 593 0.96

8 14 0.0001 0.011 16.5 1.5 3 23 615 635 614 635 0.98

9 14 0.16 18 6.4 2.9 1 23 640 662 640 662 0.97

10 14 0.0005 0.056 14.3 0.1 2 23 668 689 667 689 0.95

11 14 0.0042 0.46 11.4 8.7 1 23 694 717 694 717 0.96

12 14 0.00046 0.051 14.4 3.4 1 23 723 745 723 745 0.97

13 14 0.00038 0.042 14.7 9.1 1 23 751 774 751 774 0.97

14 14 0.029 3.2 8.8 4.5 1 23 779 802 779 802 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.4	4.9e+02	1.9	0.0	2	23	253	274	252	274	0.91
2	14	0.0024	0.27	12.1	4.5	3	23	283	304	282	304	0.96
3	14	5e-06	0.00056	20.6	1.4	1	23	464	486	464	486	0.99
4	14	0.0054	0.6	11.0	0.3	1	20	490	509	490	510	0.95
5	14	0.00034	0.038	14.8	3.2	1	23	520	542	520	542	0.98
6	14	3.2	3.5e+02	2.3	1.0	2	20	547	565	547	567	0.92
7	14	5.6e-05	0.0063	17.3	5.9	1	23	571	593	571	593	0.96
8	14	0.0001	0.011	16.5	1.5	3	23	615	635	614	635	0.98
9	14	0.16	18	6.4	2.9	1	23	640	662	640	662	0.97
10	14	0.0005	0.056	14.3	0.1	2	23	668	689	667	689	0.95
11	14	0.0042	0.46	11.4	8.7	1	23	694	717	694	717	0.96
12	14	0.00046	0.051	14.4	3.4	1	23	723	745	723	745	0.97
13	14	0.00038	0.042	14.7	9.1	1	23	751	774	751	774	0.97
14	14	0.029	3.2	8.8	4.5	1	23	779	802	779	802	0.95

Sequence Information

Coding Sequence: ATGCCACCTTTGAAACGCCAGCTTGTAACAATACGAAACGCAACCGTGTCAACAAATGACAcggaaaataatgagaaaatcaCGATTGAATCTTTTTTGACAGTTTGTAGCATTTGTGGCCAGGAGCATGCAACCGCCGGCTGTCAATTTTTCCTCGCCCTGAAATATGTGAAGGATGAGCCTCTGCTGTCCAGAGCGAGGTTGACATTGCCAAAGAATCTTGAAATCACAAAAATGGCTGATGGTTCTACAACGGTAATAACAAAATGTGATTTCCAGCAAGGAACGACTTTTGGTCCGCTGGAGGCTCAACGAGACTGGACAATGAATCCCATGAATGATTTTCCCATTAAAGTTTTTGGCAAAAGTCCTACCGAGACTTTTCATTTGGATCGTTCCAACGAAGACGCGTCGAATTGGATGTGCTTTGTTTCTCCCGCGTCTAATTCTTTAGAACAAAATCTTGTTTGTTATCAAATGCAGAGGGACATTTACTACACCGCTATGCGATTTATCCCTTCTGGTGAAGAATTGAGGGTTTGGTACGCTCCTTATTACgcttcaaaaatgaaaatgccATTGTACAACACAGAGTTTGCGAATGTCAGTCGACGTACGACAACAGAGGATAAAGCGGTCGATCGGTCCGGTGAAGATACAGTAAATCTTTTTGACATTCCACatagaaatattgaagaaatcgTTCAACGATTGCCAGCCGAACAATTGGGAGCCTTGGGTGACAAAACTAGCTGGAATTGTACGATATGCTCGATCGTCATGAATTCGGTAATCGAATACGCGAAACACTTGATGGAACATTACAAACCCCTGTCCGGTGTATTTTGTGACATatgtaacaaaaaatttcacagacTATCGGTATTGCAAaaacacaaacgattgaaacatCCTGAAGGAAGAACCAACGGCGAGGTTGTCGGTATTCCGACctcgaaaaatcaacaacaGCAAAATGCTCAGACGATACTCATGAATATGAACGATTCCGAGGGCCAAACGTCAGAAGAGATGAAAGAAATActtgtaaaattgaaaaccgGAAAATCATTGACAGAATGCAATTTATTACTGCCCGAGGGGACCGaggcagaaaaagaaaatccaaaCGAACTGTCTCTCCTCGACGCGCATTCGATAAGCGTCAATGATCTTCTGCCTAACAACACAGCATTGACAGAAAATTCGTCGTTGAAATCAATCTTGGATAATCAATGTTTAAATTTAAGTCTAGAGGCGATAACGGACTCGATGCTCTCTGACAATACGAACGGCGTTGATTCCGAAAAATTTAACGTCGAAGAATTAGCCTCCGAGTTTTTGGACATAACACCGGACGTCGAAAACATTAATAGCAGAATTGCCAGTTTTCAGTGCGACATATGCgagaaaaagtttggaaaGGCTGATTATCTCTATCGACACTTGAGAAAACATACCGGAGAGTTTATCTGTCCGAATTGTTTAggtGTATtcgcgcgaaaagaaaatttgatgtcGCACCTGTGTCCTTCGCAACAGTTCGATCATAGAAAATATGAGTGTTCGTATTgtcaaaaactatttttaacgaaaaaatatctgaaacgTCACATGGCTAAACACACAGATTGGAACGTTTGCAAATGGTGTAGGAGTTTATTCACTTCGAGGCTCGAACTCGAGGCTCACAAGTGTCAAGCTCCTAAACACATTTGTTCTCAGTGCGGTAAACGATTCGTTCATCGAGAACATCTCAATCGACATGCCAAATTACACACCAATCCTAAGCCTCCACCGAAGAAAGCGAAGAAACGTCTTGTGCAGGAAAAACCGGCTATTTGCGAGAAGTGTGGCGATATTTTTAAGAATCCTCACAGCTTGAAGCAGCACTTAAGATCGCACGgagagagaaaattcgaGTGCGACATTTGCCACAGTAAATTTCACCGAATCGGTGTTTTGCAACAACACAAATCGATCCATCAGAGTATTCAGATTCCCTGTCaaatttgtggaaaaaaactgaagagCAAAAAAGCATTGAGCGTTCACGTACTTTTGCATGGcaacagaaaatttcattgcGAAAAGTGTGACAAAAGTTTCTTTCAAAGATGCAATTATCTAAAACACTATAGGCAAATGCATAGTGACAAAGTATTGCACAAATGTCCTCATTGTCCGACTGAGTTTACGAGCGAATTGAGTTTCAACAAGCACCTCGAGAGTCACGTAAAGCCGAGTGAACATACATGCAAATCCTGTCACAAAGTTTTTCATCGAGAGTATCAATTGAAACGGCACGTTCGGACGAATCATAGTGGAATAGTGTATCGTTGTCCTTACTGTAAAATGACAGCTCGCTATCGTCACAGTATGAGAAGACATTTTGAGCGTCAGCACGAAAGTCTCAGCGAGGAATGGAACAAACCGGGCTTCGTTAATGATCTCGTTGAGAAAACTTTGTCCTCTGTGTTGACCGAGCGAATTATCATCGGACCTGATCAAAGCAGCCTAGTCGCTCAAATATCTCATAGAAACATTGCGAAATTTGAGACATCCAATGATCCTCAAGGCTCAAGCATCCACGAGACTTCATACGTCGAAAAAACACAGGAGGTTGGCGATAACGTCCGGAACAAATTAGAATCGAGTTCGTTGAACGTATCAGAAATGGATCAGGCTGCATCAAGAAACGAGAGCGAAGAAGTAACCCCGAGCGAGGTACCCCAATTGAGTATCAGCGACAACGAAGCAAATTTGGCAGAATCTGTACTGAGTAACGCGTATATATTCGGTGAGGATGGTGGCGACATAATGTTTTACGTTTTAGACGGTACACCTGTTATTACCGaatattag
Protein Sequence: MPPLKRQLVTIRNATVSTNDTENNEKITIESFLTVCSICGQEHATAGCQFFLALKYVKDEPLLSRARLTLPKNLEITKMADGSTTVITKCDFQQGTTFGPLEAQRDWTMNPMNDFPIKVFGKSPTETFHLDRSNEDASNWMCFVSPASNSLEQNLVCYQMQRDIYYTAMRFIPSGEELRVWYAPYYASKMKMPLYNTEFANVSRRTTTEDKAVDRSGEDTVNLFDIPHRNIEEIVQRLPAEQLGALGDKTSWNCTICSIVMNSVIEYAKHLMEHYKPLSGVFCDICNKKFHRLSVLQKHKRLKHPEGRTNGEVVGIPTSKNQQQQNAQTILMNMNDSEGQTSEEMKEILVKLKTGKSLTECNLLLPEGTEAEKENPNELSLLDAHSISVNDLLPNNTALTENSSLKSILDNQCLNLSLEAITDSMLSDNTNGVDSEKFNVEELASEFLDITPDVENINSRIASFQCDICEKKFGKADYLYRHLRKHTGEFICPNCLGVFARKENLMSHLCPSQQFDHRKYECSYCQKLFLTKKYLKRHMAKHTDWNVCKWCRSLFTSRLELEAHKCQAPKHICSQCGKRFVHREHLNRHAKLHTNPKPPPKKAKKRLVQEKPAICEKCGDIFKNPHSLKQHLRSHGERKFECDICHSKFHRIGVLQQHKSIHQSIQIPCQICGKKLKSKKALSVHVLLHGNRKFHCEKCDKSFFQRCNYLKHYRQMHSDKVLHKCPHCPTEFTSELSFNKHLESHVKPSEHTCKSCHKVFHREYQLKRHVRTNHSGIVYRCPYCKMTARYRHSMRRHFERQHESLSEEWNKPGFVNDLVEKTLSSVLTERIIIGPDQSSLVAQISHRNIAKFETSNDPQGSSIHETSYVEKTQEVGDNVRNKLESSSLNVSEMDQAASRNESEEVTPSEVPQLSISDNEANLAESVLSNAYIFGEDGGDIMFYVLDGTPVITEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00262886;
90% Identity: iTF_00266703;
80% Identity: -