Bvan007210.1
Basic Information
- Insect
- Bombus vancouverensis
- Gene Symbol
- JARID2_1
- Assembly
- GCA_011952275.1
- Location
- NW:6196199-6205433[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 1.1e+04 -3.9 0.1 68 82 161 177 146 178 0.58 2 2 5.8e-23 1e-19 70.0 0.0 6 89 1399 1480 1395 1480 0.94
Sequence Information
- Coding Sequence
- atggTGTTAAGTCgaaatgataaaagaaaaaggaaagaaggagATTTGGTGGATCTTATGGAGCCACTCTCTGAATCTCCAAAgagGACCAAAGTACATGCACAAAGAAAATTTGCACAAGGTGCAACGACAGTTTTCAATCCTTCACATACTCCTATCAAGGATAAAGAAAAGACTAAACCAGCAGTTATAACAGAATTAATAACTCACAAACGACCAAATACAGAAGATTTCTTGACATTTTTGTGCTTTAGagGAACTCCAATTTTACCTCCAAGCTTAAATTTTTTCAATGTTGgaagtaaaaaggaaaagccAGATACTAAGCCAGCACGTATAGCAACAGATAAAACTATATCTTCAACTAGTACATCTATTGAAAATCAAAAACCAGATTCAAGTCAGAAAAGTATCACAAAAGTGAAACCTATTATTACTGACAAGAAGAAAGTCTCAAATAcaatacagaaaaatattacaacatttaaaAGTACTACATCTACAGTACAAGCACtcaaaaagaaatatcaagAACAGCGTCTTGCTAAACAAagaatcaaaaataaatttaaaacatCATGTGTTATGAGAACAAGATCTTGTACAGAACGAACGTTATTAAAATCTGTAAACAAATTAGCACCCAGAAAATTTTTACCAAGAGTTGAAACTAAGAGACTTGGTTTACGAAGTAGTGTGCTTGCAGATAAAACAAAAACAGGTCCTTCAAAAGTTAAACCTGTATCATCTAAACCAAAGAAGAAAGTTATagtaaaacaaaagaataGTGATACATCAAATTCTGATTCTACAtctgaagaagaagaagaaggtcCCTTGGAAAAATCAGTTCCACAGATGAAACGTACAATTCAAAAGGCTGTGCAAAAAAACATATGTACAAGAAGTAAATCTGAAATGAGAAGAATTACACGTTCTCATAGTGGCACAATTTCCCCAAAAAATCTTTGTAGGAGACCAACAAGGAAAACTAAAGAAGCAGCTGCTGTATATATGGAAATTCTTGGACGGAAACTCGTAAGTCCTGATTTAGAAAATGATGATAATGTTTCTATGGACAGTTTTCCAGAATTACCAAATACACGTAAAACTACTCAACCAGAAAATGAAATCAAAACTAAAGTAAAACAATCTGTTACAAAAACAActactaaaaataaagataataagATTACTTCTATTCATAATACATCAAATAAACGATTGGATAAGACCAAAACTAataaaattgcttttaaaagtaaaagatTAATAAGAGTTCACAAGTATTGTGAAATTGATAGTGATGAAGAATCTGTAAGTTCTAATGCCACTAGTAATACAAGACCTGTTACAAGAAGAAGTttaggaaaattaaataaacctGTAAGTCGATATCTTAGATCTTCTACTAAAAATATAACTACAAGAATGGAgattcaaaataatataagtATTAAATCAAAATGTCAAGTTCAAAATaatgcaaaatttaataaagaaaaatttgtaactAAACGTAAACGAGAACAAAGCTCTACTAAATCATTACCTGAAAAAGGTAATGGACTAAAgcaaaaagaattaaaagatacTGAATTTGAAGGTACAGATTCTGATGAAGAGACATTAGGAATGTTgctcaataaattaaaaagaaagaaagatgataatgtacaaaaagaaattgttaataaaaataacaatcaaGATATTGAGAATAAAATTGAGCAGtctttaaatgaaaattttgtaaaaaccgacctttcaaaaatatcagATGACGAAGAATCTTTTCGGGGATTTACAAAGAAAGCAATATCCAAAGTATTAAATTCTTGTCAAACACATGTTAATGTTAATCTTCTGACCACGAAAAAGACCAGTGATAAATTAGAAACagttaaaatagaaaatgaacaaaattcATATGTAGCTAATAAAAAGGTAGATAAGGAATTGTCGAGTAATGAACCTTTACTAAGCATAAATTCTCCACCAGTATTAAATATACCATATAATCAGCATCTTCAAAAATCTGAAAAAGATAAATCAGAGTTACCTGATTTAATATCTGATGAAATAGAACAAGAAATATCAACAAATACTGAAAAAGAATGTCATCATAAAACAGAGATTTCATCCACAAATGTTATAGATATGTCTTTATCAACATTGCATGTAAGGAAGGAGAAAGTAAATATGTCGACTgaacaaattgaaaaatggTTAAATGAAAGTTCATTTGCTAAAGAGGAAAGTAAGttagaaatggaaaatgtgTCTACTTTTAAATATGATGTTTGTGAAAAGAAGACTGATGTATCACATTTATCAATTTCAACAAAAATTCAACATTTGGTAAGACCAGTTAATGTTACACTTTCTAAATTAGCAGAAAAGGCTAATGTAAAAGATCGCAtgaatacatataataaatatgctCCCATTATAACAGGAGAATTACAATCTGAAATAAAACAGCAGAATGagttttctaatattaatattaatattaacaaaCAGAATACATACTtgaaagatattaataaagGGCGGAACATAAAGCCAAATAAAGACTCATGTCCTGGAGAAGAAGGTGATAGTGCACTAAAACCTGATCAAAATTCTACAGATAATTCTAATGAAAAAAAGATATCAACAGAGAAGAAAACCATATTTCAACCAAGAAAACCCTTTTTACCAAAAGTTAAAGAACGTAAAACAGTAATTCCTAATGCAAATGCATTTTCTCCAGAAAATGAAAGCAGTGTTTATGCATTTGAAAGTGACACAGAAATCCCTGTTAGTACTCCTTTTAGACGTAAAGTTCGAGAATCTAATAAATCAAACGTGATTCATAATCTATCCCAGATGGATGTAACtaaatctgaaaataatacaaataaatctgaaaataattcaaataaatttgataacgctccaaataaatctgaaaataatacaaataaatttgtcaataatgcaaataaatccgaaaataacataaataaatcTGCGAGTGaagtaaataaagatgtagaagaaataataaaagataattgtGAAATGacaatatttaaagaaaattccaTCAATAATTCtgcaaaaaatgaaaatgaaatagtagaaataaaaaatatatcgaatacaACATTAAATGTAAACAAATTTGAATTACCAAAAAATTTTGCAACTTTGGCTAATATACAAGTTTTACCATTAGATAAATTAACAACAACTTGGAGTAATGTAAATTGTAGTACTTCAATAGCTGTACAAGTAAATCTTGATGATAATGCACAAACGCAAAAGCAGATTGGAGAAAGTGATACAAATCAACAAAAAAGTACAGAGATATCTACTCAGACTGAAAACAACAATGAAAATGATGATGAAACTGATGGTCAACTGTTTTACATACCTTTACAAGCTGTCACAAGAAATGGACCAAATTTAGTTCAAGGACAGCAATTAATTCAAGGTGTAGCTGTAAAACTCGGTACTGAAGGACCAAATGGTCCTAATCAAAAAGTTCTTTTAAGAGCAAAATTGGTTACTAAACCTCCATCATCAATTGCACGTTGTCCTCCTGTAGGAACAGTACAGCCTACAACTCGTACTCCACCTAATTCTACTTTAATAACAACTGATCATTCAATACCATCTACTTCTTCAAGTACAGTATCAACTGTTACTACATCTAATTCCGAACTTCAACCATCTACtccaaataaaaatgaaaacatGGTACAAATTGCAAATAGGCAAAATATTGGAACTGGATTAAATATAGGAACTGAAAAATTGCCAAAATCACCAAAAACTCCTAGAGAAAGAAAAACCTCAATTGATTCAAATAAGAATGGGAAAAGATGTCAGATCAAAGCAAAACAGAAGGGTTCTGAAATTTATTCTCCCATCAATAATGTGACATTTCCAAGTgcaaaagatgaaaataatgaagCACGATTAGTTGAAGCTCCAACATTTCATCCTACTGAAAAAGATTTCCAAGATCCTTTAGAATACATAGATAAAATAAGGCCAATTGCAGAGAAATTTGGAATATGCAGAGTTGTACCACCACCTAATTTTAAACCGGAATGCAAAGTATCAGATGATATGAGGTTTACTGCTTACAATCAATATGTACATCGTATGTTACATAGATGGGGTCCCAATGTGAAAGAAATGATGgctataaagaaatatttagcTACACAAAGCATAACATTAACTCATCCACCTTGGATTGGTGGTATGGAAGTTGATTTGCCTCATTTATATCAAACAGTTCAAAGTTTAGGCGGATTAAAGGAAgtgattgaaaagaaaaagtggCAGAAAGTAGCTGATGGGATGAAAATACCAAAATCTGCTCAAGATCGTGTAACCAAATTGGATGACATTTACTGCAAATACTTATTACCATATGATACATTATCTCCAGAGGAACGAGGTAAATTATTTGATGAAGTCGAATCTGAGTGGATGAAAAGAGAAAGTAGAGTTTTACAAAGGCAAAATGCACCAATAAGTGAAAAtgaagaagatgaagatgaTGATAGTTCTGACGAAATTGAGGAATGCATCGTTAAAGGTAGAAACATGCCGTTAAACGCTTTTTATCGTATTGCACGAAACACACAACGTATGTGGTTTGGTGAAAATCAACGATCTGGAAACGAAACAGAAGGCGCTTCTGCTGATGAGGTTGAAAGTGCATTTTGGAAACATGTTGCAGAAAGGAAAAGACATGTTTGTGTACACGCTGCAAGCATTGATTCAAGTGGACGCGGTTTTGGATTTTCGGTTGCTAAAAATAGTCCGTTCGCAAGACATCCATGGAATCTTAAAGTACTTACTAATAACGCTGGCTCAGTACTGAGAGCTTTAGGTCCTATAATGGGTGTGACTGTACCAACACTTCATGTGGGTATGTTATTTAGTGCATGTTGTTGGTACCGTGATCCTCATGGTCTTCCTTGGATAGAATATTTGCATACTGGTGCTAAAAAAATTTGGTACGGTATACCCGACGAACACAACAATAACTTTAGAGAGGCTCTTTCAAAAATGGTTCCAcgatattgtaaaaataaaactatATGGCTGCCATCAGATACAGCAATGGTTCCTCCAGAATTATTGGTTAGTAACGGAGTATCACTATGCCAGACTGTTCAGGAACCAGGGCAATTTATAGTTGTATTTCCTAAAGCATTTACATCAAGTATATGCACTGGTTATGTAGTATCTGAAAGTGTTTACTTTGCACAACCATCCTGGTTAGAAACTGCTGAACAAGTATTTAAAgATATACAAGATAGTTGTGAACCATCAATCTTTTCATTtgaaagattattatttaatattattaatgacTCTAGATCTCATATAGAAGTATTAAAACAGATTCTAGCAAGTGTAATTAAAATtcgtgaaaaagaaatagattaTCGTAAACAATTAGAATCAGTAGGTCTCATAAACACAGAAAGATTACCTTTACCAGATAGtggaaaacgaaagaaaggaaaaaaagtaaaagaagatGATGGCGACTTTGAATGTGAAACTTGTAGAGCTAATTTGTTTGTTTCATTAGTGAGTAATTCACAAGATGACAGTGTTTACTGTTTACCACATGCATTGcaattatttaatagaaagaaacaaattttaaaacattgtACTCTAATGTACACATACAACGAGGAGGAATTAAATGATTTGATCCATAAACTAGAAGAAAGAATTGAAGCCAAATCTAAAAAGACTAATCAAATCAAACAAACAAAGTAA
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNPSHTPIKDKEKTKPAVITELITHKRPNTEDFLTFLCFRGTPILPPSLNFFNVGSKKEKPDTKPARIATDKTISSTSTSIENQKPDSSQKSITKVKPIITDKKKVSNTIQKNITTFKSTTSTVQALKKKYQEQRLAKQRIKNKFKTSCVMRTRSCTERTLLKSVNKLAPRKFLPRVETKRLGLRSSVLADKTKTGPSKVKPVSSKPKKKVIVKQKNSDTSNSDSTSEEEEEGPLEKSVPQMKRTIQKAVQKNICTRSKSEMRRITRSHSGTISPKNLCRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSMDSFPELPNTRKTTQPENEIKTKVKQSVTKTTTKNKDNKITSIHNTSNKRLDKTKTNKIAFKSKRLIRVHKYCEIDSDEESVSSNATSNTRPVTRRSLGKLNKPVSRYLRSSTKNITTRMEIQNNISIKSKCQVQNNAKFNKEKFVTKRKREQSSTKSLPEKGNGLKQKELKDTEFEGTDSDEETLGMLLNKLKRKKDDNVQKEIVNKNNNQDIENKIEQSLNENFVKTDLSKISDDEESFRGFTKKAISKVLNSCQTHVNVNLLTTKKTSDKLETVKIENEQNSYVANKKVDKELSSNEPLLSINSPPVLNIPYNQHLQKSEKDKSELPDLISDEIEQEISTNTEKECHHKTEISSTNVIDMSLSTLHVRKEKVNMSTEQIEKWLNESSFAKEESKLEMENVSTFKYDVCEKKTDVSHLSISTKIQHLVRPVNVTLSKLAEKANVKDRMNTYNKYAPIITGELQSEIKQQNEFSNINININKQNTYLKDINKGRNIKPNKDSCPGEEGDSALKPDQNSTDNSNEKKISTEKKTIFQPRKPFLPKVKERKTVIPNANAFSPENESSVYAFESDTEIPVSTPFRRKVRESNKSNVIHNLSQMDVTKSENNTNKSENNSNKFDNAPNKSENNTNKFVNNANKSENNINKSASEVNKDVEEIIKDNCEMTIFKENSINNSAKNENEIVEIKNISNTTLNVNKFELPKNFATLANIQVLPLDKLTTTWSNVNCSTSIAVQVNLDDNAQTQKQIGESDTNQQKSTEISTQTENNNENDDETDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPVGTVQPTTRTPPNSTLITTDHSIPSTSSSTVSTVTTSNSELQPSTPNKNENMVQIANRQNIGTGLNIGTEKLPKSPKTPRERKTSIDSNKNGKRCQIKAKQKGSEIYSPINNVTFPSAKDENNEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVESEWMKRESRVLQRQNAPISENEEDEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNETEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILASVIKIREKEIDYRKQLESVGLINTERLPLPDSGKRKKGKKVKEDDGDFECETCRANLFVSLVSNSQDDSVYCLPHALQLFNRKKQILKHCTLMYTYNEEELNDLIHKLEERIEAKSKKTNQIKQTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01424161;
- 90% Identity
- iTF_00220371; iTF_00214196; iTF_00218901; iTF_00232408; iTF_00216863; iTF_00231106; iTF_00225700; iTF_00225031; iTF_00217544; iTF_00223664; iTF_00226384; iTF_00222326; iTF_00221048; iTF_00229144; iTF_00227067; iTF_00224350; iTF_00214815; iTF_00218208; iTF_00230499; iTF_00222980; iTF_00219591; iTF_00233023; iTF_00229819; iTF_00228456; iTF_00215497; iTF_00227748; iTF_00221722;
- 80% Identity
- -