Basic Information

Insect: Bombus skorikovi
Gene Symbol: JARID2
Assembly: GCA_014737355.1
Location: JACXIH010000029.1:1974434-1981275[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.8e-23 1.9e-19 70.0 0.0 6 89 1396 1477 1392 1477 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.8e-23	1.9e-19	70.0	0.0	6	89	1396	1477	1392	1477	0.94

Sequence Information

Coding Sequence: ATGGTGTTAAGTCGAAATGATAAAAGAAAAAGAAAAGAAGGAGATTTGGTGGATCTTATGGAGCCACTCTCCGAATCTCCAAAGAGGACCAAAGTACATGCACAAAGAAAATTTGCACAAGGTGCAACAGCAGTTTTCAATCCTTCACATACTCCTATCAAGGATAAAGAAAAGACTAAACCAGCAGTTATAACAGAATTAATAACTCACAAACGACCAAATACAGAAGACTTCTTGACATTTTTGTGCTTTAGAGGAACTCCAATTTTACCTCCAAGCTTAAATTTTTTCAATGTTGGAAGTAAAAAGGAAAAGCCAGATACTAAGCCAGCACGTATAGCAACAGATAAAACTATATCTTCAACTAGTACATCTATTGAAAATCAGAAACCAGATTCAAGTCAGAAAAGTATCACAAAAGTGAAACCTATTATTACTGACAAGAAGAAAGTCCCAAATACAATACAGAAAAATATTACAACATTTAAAAGTACTACATCTACAGTACAAGCACTCAAAAAGAAATATCAAGAACAACGTCTTGCTAAACAAAGAATCAAAAATAAATTTAAAACATCATGTGTTATGAGAACAAGATCTTGTACCGAACGAACGTTATTAAAATCTGTAAACAAATTAGCGCCGAGAAAATTTTTGCCAAGAATTGAAACTAAGAGGCTTGGTTTACGAAGTAGTGTGCTTGTAGATAAAGCAAAAACAGGTCCTTCAAAAGTTAAACCTGTACCATCTAAACCAAAGAAGAAAGTTATAGTAAAACAAAAGAATAGTGATACATCCAATTCTGATTCTACATCTGAAGAAGAAGAAGAAGGTCCTTTGGAAAAATCAGTTCCACAGATGAAACGTACAATTCAAAAGACTGTGCAAAAAAACATATGTACAAGAAGTAAATCTGAAATGAGAAGAATTACACGTTCTCATAGTGGCACAACTACCCCAAAAAATCTTTGTAGGAGACCAACAAGGAAAACTAAAGAAGCAGCTGCTGTATATATGGAAATTCTTGGACGGAAACTCGTAAGTCCTGATTTAGAAAATGATGATAATGTTTCTATGGACAGTTTTCCAGAATTACCAAATACACGTAAAACTTCTCAACCAGAAAATGAAATCAAAACTAAAGTAAAACAATCTGTTACAAAAACAACTGCTAAAAATAAAGATAATAAAATTACTTCTGTTCATAATACATCAAATAAACGATTGGATAAGACCAAAACTAATAAAATTGCTTTTAAAAGTAAAAGATTAATAAGAGTTCACAAGTATTGTGAAATTGATAGTGATGAAGAATCTGTAAGTTCTAATGGCACTAGTAACGCAAGACCTGTTACAAGAAGAAGTTTAGGAAAATTAAATAAACCTGTAAGTCGATATCTTAGATCTTCTACTAAAAATATAACTACAAGAATGGAGATTCAAAATAATATAAGCATTAAATCAAAATGTCATGTTCAAAATAATGCAAAATTTAATAAAGAAAAATTTGTAACTAAACGTAAACGAGAACAAAGCTCTACTAAATCATTATCTGAAAAAGGTAATGAACTAAAGCAAAAAGAATTAAAGGATACTGAATTTGAAAGTACAGATTCTGATGAAGAGACATTAGGAATGTTGCTCAATAAATTAAAAAGAAAGAAAGATGATAATGTACAAAAGGAGATTGTTAATAAAAATAACAATCAAGATATTGAGAATAAAATTGAGCAGTCTTTAAATGAAAATTTTGTAAAAACCGACCTTTCAAAAATATCAGATGACGAAGAATCTTTCCGGGGATTTACGAAGAAAGCCATATCCAAAGTATTAAACTCTTGTCAAACACATGTTAATGTTAATCTTCTGACCACGAAAAAGACCAGTGATAAATTAGAAACAGCTAAAATAGAAAATGAACAAAATTCATATGTAGCTAATAAAGAGGTAGATAAGGAATTGTCGAGTAATGAGCCTTTACTAAGCATAAATTCTCCACCAGTATTAAATATACCATATAATCAGCATCTTCAAAAATCTGAAAAAGATAAATCAGAGTTACCTGATTTAATATCTGATGAAATAGAGCAAGAAATATCAACAAATACTGAAAAAGAATGTCATCATAAAACAGAGATTTCATCCACAAATGTTATAGATATGTCTTTATCAACATTGCATGTAAGGAAGGAGAAAGTAAATATGTCGACTGAACAAATTGAAAAATGGTTAAATGAAAGTTCATTTGCTAAAGAGGAAAGTAAGTTAGAAATGGAAAATGTGTCTACTTTTAAATATGATGTTTGTGAAAAAAAGACTGATGTATCACATTTATCAATTTCAACAAAAATTCAACATTTGGTAAGACCAGTTAATGTTACACTTTCTAAATTAACAGAAAAGGCTAATGTAAAAGATCGCATGAATACGTATAATAAATATGCTCCCATTATAACAGGAGAATTACAATCTGATATAAAACAGCAGAATGAGTTTTCTAATATTAATATTAACAAACAAAATACAAATTTAAAAGATATTAATAAAGGGCGGAACATTAAGCCAAATAAAGACTCATGTTCTGGAGAAGAAGGCGATAGTGCACTAAAACCTGATCAAAATTCTACAGATAGCTCTAATGAAAAAAAGATATCAACAGAGAAGAAAACCATATTTCAACCAAGAAAACCGTTTTTACCAAAAGTTAAAGAACGTAAAACAGTAACTCCTAATGCAAATGCATTTTCTCCGGAAAATGAAAGCAGTGTTTATGCATTTGAAAGTGACACAGAAATCCCTGTTAGTACTCCTTTTAGACGTAAAGCTCGAGAATTTAATAAATCAAACGTGATTCATAATCTATCCCAGACGGATGCAACAAAATCTGAAAATAATACAAATAAATCTGAAAATAATTTAAATAAATTTGATAACGCTGCAAATAAATCTGAAAATAATACAAATAAATTTGTCAATAATGCAAATAAATCCGAAAATAACATAAATAAATCTGTGAATGAAGCAAATAAAAATGTAGAAAGAATAATTAAAGATAATTGTGAAATGACAATATTTAAAGAAAATTCCATCAATAATTCTATAAAGAATGAAAATGAAATAGTAGAAATAAAAAATATATCGAATACAACATTAAATGTAAACAAATTTGAATTACCAAAAAATTTTGCAACTTTGGCTAATATACAAGTTTTACCATTAGATAAATTAACAACAACTTGGAGTAATGTAAATTGTAGTACTTCAATAGCTGTACAAGTAAATCTTGATGATAATGCACAAACACAAAAGCAGATTGGAGAAAGTGATACAAATCAACAAAAAAGTACAGAAATATCTACTCAGACTGAAAGCAACAATGAAAATGATGATGAAAATGATGGTCAACTGTTTTACATACCTTTACAAGCTGTCACAAGGAATGGACCAAATTTAGTTCAAGGACAGCAATTAATTCAAGGTGTAGCTGTAAAACTCGGTACTGAAGGACCAAATGGTCCTAATCAAAAAGTTCTTTTAAGAGCAAAATTGGTTACTAAACCTCCATCATCAATTGCACGTTGTCCTCCTGTAGGAACAGTACAGCCTACAACTCGTACTCCACCTAATCCTACTCTAATAACAACTGATCATTCAATACCATCTACTTCTTCAAGTACAGCATCAACTGTTACATCTAATTCTGAATTTCAACCATCTACTCCAAACAAAAATGAAAACATAGTACAAATTGCAAATAGGCAAAATATTGGAACTGGATTAAATATAGGAACTGAAAAATTGCCAAAATCACCAAAAACTCCTAGAGAAAGAAAAACCTCAATTGATTCAAATAAGAATGGGAAAAGATGTCAGATTAAAGCAAAACAGAAAAATTCTGAAATTTATTCTCCCATCAATAATGTAACATTTCCAAGTGCAAAAGATGAAAATAATGAAGCACGATTGGTTGAAGCTCCAACATTTCATCCTACTGAAAAAGATTTCCAAGATCCTTTAGAATACATAGACAAAATAAGGCCAATTGCAGAGAAATTTGGAATATGCAGAGTTGTACCACCACCTAATTTTAAACCGGAATGCAAAGTATCAGATGATATGAGGTTTACTGCTTACAATCAATATGTACATCGTATGTTACATAGATGGGGTCCTAATGTGAAAGAAATGATGGCTATAAAAAAATATTTAGCTACACAAAGTATAACATTAACTCATCCACCTTGGATTGGTGGTATGGAAGTTGATTTGCCTCATTTATATCAAACAGTTCAAAGTTTAGGCGGATTAAAAGAAGTGATTGAAAAGAAAAAGTGGCAGAAAGTAGCTGATGGGATGAAAATACCAAAATCTGCTCAAGATCGTGTAACCAAATTGGATGACATTTACTGCAAATACTTATTACCATATGATACATTATCTCCAGAGGAACGAGGTAAATTATTTGATGAAGTTGAGTCTGAGTGGTTGAAAAGAGAAAGTAGAGTTTTACAAAGGCAAAATGCACCAATAAGTGAAAATGAAGAAGATGAAGATGATGATAGTTCTGACGAAATTGAGGAATGCATCGTTAAAGGTAGAAACATGCCGTTAAACGCTTTTTATCGTATTGCACGAAACACACAACGTATGTGGTTTGGTGAAAATCAACGATCTGGAAACGAAACAGAAGGCGCTTCTGCTGATGAGGTTGAAAATGCATTTTGGAAACATGTTGCAGAAAGGAAAAGACATGTTTGTGTACACGCTGCAAGCATTGATTCAAGTGGACGCGGTTTTGGATTTTCGGTTGCTAAAAATAGTCCGTTCGCAAGACATCCGTGGAATCTTAAAGTACTTACTAATAACGCTGGCTCAGTACTGAGAGCTTTAGGTCCTATAATGGGTGTGACTGTACCAACACTTCATGTGGGTATGTTATTTAGTGCATGTTGTTGGTACCGTGATCCTCATGGTCTTCCTTGGATAGAATATTTGCATACTGGTGCTAAAAAAATTTGGTATGGTATACCCGACGAACACAACAATAACTTTAGAGAGGCTCTTTCAAAAATGGTTCCACGATATTGTAAAAATAAAACTATATGGCTGCCATCAGATACAGCAATGGTTCCTCCAGAATTATTGGTTAGTAATGGAGTATCACTATGCCAGACTGTTCAGGAACCAGGGCAATTTATAGTTGTATTTCCTAAAGCATTTACATCAAGTATATGCACTGGTTATGTAGTATCTGAAAGTGTTTACTTTGCACAACCATCCTGGTTAGAAACTGCTGAACAAGTATTTAAAGATATACAAGATAGTTGTGAACCATCAATCTTTTCATTTGAAAGATTATTATTTAATATTATTAATGACTCTAGATCTCATATAGAAGTATTAAAACAGATTCTAGCAAGTGTAATTAAAATTCGTGAAAAAGAAATAAGTTATCGTAAACAATTAGAATCAGTAGGTCTCATAAACACAGAAAGATTACCTTTACCAGATAGTGGAAAACGAAAGAAAGGAAAAAAAGTAAAAGAAGATGATGGCGACTTTGAATGTGAAACTTGTAGAGCTAATTTGTTTGTTTCATTAGTGAGTAATTCACAAGATGACAGTGTTTACTGTTTACCACATGCATTGCAATTATTTAATAGAAAGAAACAAATTTTAAAACATTATACTTTAATGTACACATACAACGAGGAGGAATTAAATGATTTGATCCATAAACTAGAAGAAAGAATTGAAGCCAAATCTAAAAAGACTAATCAAATCAAACAAACAAAGTAG
Protein Sequence: MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATAVFNPSHTPIKDKEKTKPAVITELITHKRPNTEDFLTFLCFRGTPILPPSLNFFNVGSKKEKPDTKPARIATDKTISSTSTSIENQKPDSSQKSITKVKPIITDKKKVPNTIQKNITTFKSTTSTVQALKKKYQEQRLAKQRIKNKFKTSCVMRTRSCTERTLLKSVNKLAPRKFLPRIETKRLGLRSSVLVDKAKTGPSKVKPVPSKPKKKVIVKQKNSDTSNSDSTSEEEEEGPLEKSVPQMKRTIQKTVQKNICTRSKSEMRRITRSHSGTTTPKNLCRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSMDSFPELPNTRKTSQPENEIKTKVKQSVTKTTAKNKDNKITSVHNTSNKRLDKTKTNKIAFKSKRLIRVHKYCEIDSDEESVSSNGTSNARPVTRRSLGKLNKPVSRYLRSSTKNITTRMEIQNNISIKSKCHVQNNAKFNKEKFVTKRKREQSSTKSLSEKGNELKQKELKDTEFESTDSDEETLGMLLNKLKRKKDDNVQKEIVNKNNNQDIENKIEQSLNENFVKTDLSKISDDEESFRGFTKKAISKVLNSCQTHVNVNLLTTKKTSDKLETAKIENEQNSYVANKEVDKELSSNEPLLSINSPPVLNIPYNQHLQKSEKDKSELPDLISDEIEQEISTNTEKECHHKTEISSTNVIDMSLSTLHVRKEKVNMSTEQIEKWLNESSFAKEESKLEMENVSTFKYDVCEKKTDVSHLSISTKIQHLVRPVNVTLSKLTEKANVKDRMNTYNKYAPIITGELQSDIKQQNEFSNININKQNTNLKDINKGRNIKPNKDSCSGEEGDSALKPDQNSTDSSNEKKISTEKKTIFQPRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEIPVSTPFRRKAREFNKSNVIHNLSQTDATKSENNTNKSENNLNKFDNAANKSENNTNKFVNNANKSENNINKSVNEANKNVERIIKDNCEMTIFKENSINNSIKNENEIVEIKNISNTTLNVNKFELPKNFATLANIQVLPLDKLTTTWSNVNCSTSIAVQVNLDDNAQTQKQIGESDTNQQKSTEISTQTESNNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPVGTVQPTTRTPPNPTLITTDHSIPSTSSSTASTVTSNSEFQPSTPNKNENIVQIANRQNIGTGLNIGTEKLPKSPKTPRERKTSIDSNKNGKRCQIKAKQKNSEIYSPINNVTFPSAKDENNEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVESEWLKRESRVLQRQNAPISENEEDEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNETEGASADEVENAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILASVIKIREKEISYRKQLESVGLINTERLPLPDSGKRKKGKKVKEDDGDFECETCRANLFVSLVSNSQDDSVYCLPHALQLFNRKKQILKHYTLMYTYNEEELNDLIHKLEERIEAKSKKTNQIKQTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01424161;
90% Identity: iTF_00231784;
80% Identity: -