Bbif008884.1
Basic Information
- Insect
- Bombus bifarius
- Gene Symbol
- JARID2
- Assembly
- GCA_011952205.1
- Location
- NW:1228586-1237120[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 1.1e+04 -3.9 0.1 68 82 161 177 146 178 0.58 2 2 5.8e-23 1e-19 70.0 0.0 6 89 1399 1480 1395 1480 0.94
Sequence Information
- Coding Sequence
- atggTGTTAAGTcgaaatgataaaagaaaaaggaaagaaggagaTTTGGTGGATCTTATGGAGCCACTCTCCGAATCTCCAAAgagGACCAAAGTACATGCACAAAGAAAATTTGCACAAGGTGCAACGACAGTTTTCAATCCTTCACATACTCCTATCAAGGATAAAGAAAAGACTAAACCAGCAGTTATAACAGAATTAATAACTCACAAACGACCAAATACAGAAGATTTCTTGACATTTTTGTGCTTTAGagGAACTCCAATTTTACCTCCAAGCttaaattttttcaatgttggaagtaaaaaggaaaagccAGATACTAAGCCAGCACGTATAGCAACAGATAaaactatatcttcaactaGTACATCTATTGAAAATCAAAAACCAGATTCAAGTCAGAAAAGTATCACAAAAGTGAAACCTATTATTACTGACAAGAAGAAAGTCTCAAATAcaatacagaaaaatattacaacatttaaaaGTACTACATCTACAGTACAAGCACtcaaaaagaaatatcaagAACAGCGTCTTGCTAAACAAagaatcaaaaataaatttaaaacatCATGTGTTATGAGAACAAGATCTTGTACAGAACGAACGTTATTAAAATCTGTAAACAAATTAGCACCCAGAAAATTTTTACCAAGAGTTGAAACTAAGAGACTTGGTTTACGAAGTAGTGTGCTTGCAGATAAAACAAAAACAGGTCCTTCAAAAGTTAAACCTGTATCATCTAAACCAAAGAAGAAAGTTATagtaaaacaaaagaatagTGATACATCAAATTCTGATTCTACAtctgaagaagaagaagaaggtcCCTTGGAAAAATCAGTTCCACAGATGAAACGTACAATTCAAAAGGCTGTGCAAAAAAACATATGTACAAGAAGTAAATCTGAAATGAGAAGAATTACACGTTCTCATAGTGGCACAATTTCCCCAAAAAATCTTTGTAGGAGACCAACAAGGAAAACTAAAGAAGCAGCTGCTGTATATATGGAAATTCTTGGACGGAAACTCGTAAGTCctgatttagaaaatgatGATAATGTTTCTATGGACAGTTTTCCAGAATTACCAAATACACGTAAAACTACTCAACCAGAAAATGAAATCAAAACTAAAGTAAAACAATCTGTTACAAAAACAACTACTAAAAATAGAGATAATAAGATTACTTCTATTCATAATACATCAAATAAACGATTGGATAAGACCAAAACTAataaaattgcttttaaaagtaaaagattAATAAGAGTTCACAAGTATTGTGAAATTGATAGTGATGAAGAATCTGTAAGTTCTAATGCCACTAGTAATACAAGACCTGTTACAAGAAGAAGTttaggaaaattaaataaacctGTAAGTCGATATCTTAGATCTTCtactaaaaatataactaCAAGAATGGAgattcaaaataatataagtatTAAATCAAAATGTCAAGTTCAAAATaatgcaaaatttaataaagaaaaatttgtaactaAACGTAAACGAGAACAAAGCTCTACTAAATCATTACCTGAAAAAGGTAATGGACTAAAgcaaaaagaattaaaagatacTGAATTTGAAGGTACAGATTCTGATGAAGAGACATTAGGAATGTTgctcaataaattaaaaagaaagaaagatgataatgtacaaaaagaaattgttaataaaaataacaatcaAGATATTGAGAATAAAATTGAGCAgtctttaaatgaaaattttgtaaaaaccgacctttcaaaaatatcagATGACGAAGAATCTTTTCGGGGATTTACAAAGAAAGCAATATCCAAAGTATTAAATTCTTGTCAAACACATGTTAATGTTAATCTTCTGACCACGAAAAAGACCAGTGATAAATTAGAAACagttaaaatagaaaatgaacaaaattcaTATGTAGCTAATAAAAAGGTAGATAAGGAATTGTCGAGTAATGAACCTTTACTAAGCATAAATTCTCCACCAGTATTAAATATACCATATAATCAGCATCTTCAAAAATCTGAAAAAGATAAATCAGAGTTACCTGATTTAATATCTGATGAAATAGAACAAGAAATATCAACAAATACTGAAAAAGAATGTCATCATAAAACAGAGATTTCATCCACAAATGTTATAGATATGTCTTTATCAACATTGCATGTAAGGAAGGAGAAAGTAAATATGTCGACtgaacaaattgaaaaatggTTAAATGAAAGTTCATTTGCTAAAGAGGAAAGTAAGttagaaatggaaaatgtgtCTACTTTTAAATATGATGTTTGTGAAAAGAAGACTGATGTATCACATTTATcaatttcaacaaaaattcAACATTTGGTAAGACCAGTTAATGTTACACTTTCTAAATTAGCAGAAAAGGCTAATGTAAAAGATCGCAtgaatacatataataaatatgctCCCATTATAACAGGAGAATTACAATCTGAAATAAAACAGCAGAATGagttttctaatattaatattaatattaacaaacaGAATACATACttgaaagatattaataaaggGCGGAACATAAAGCCAAATAAAGACTCATGTCCTGGAGAAGAAGGTGATAGTGCACTAAAACCTGATCAAAATTCTACAGATAGTTCTaatgaaaaaaagatatcAACAGAGAAGAAAACCATATTTCAACCAAGAAAACCCTTTTTACCAAAAGTTAAAGAACGTAAAACAGTAATTCCTAATGCAAATGCATTTTCTCCAGAAAATGAAAGCAGTGTTTATGCATTTGAAAGTGACACAGAAATCCCTGTTAGTACTCCTTTTAGACGTAAAGTTCGAGAATCTAATAAATCAAACGTGATTCATAATCTATCCCAGATGGATGTAACtaaatctgaaaataatacaaataaatctgaaaataattcaaataaatttgataacgctccaaataaatctgaaaataatacaaataaatttgtcaataatgcaaataaatccgaaaataacataaataaatctGCGAGTGaagtaaataaagatgtagaagaaataataaaagataattgtGAAATGacaatatttaaagaaaattccaTCAATAATTCtgcaaaaaatgaaaatgaaatagtagaaataaaaaatatatcgaatacaACATTAAATGTAAACAAATTTGAATTACCAAAAAATTTTGCAACTTTGGCTAATATACAAGTTTTACCATTAGATAAATTAACAACAACTTGGAGTAATGTAAATTGTAGTACTTCAATAGCTGTACAAGTAAATCTTGATGATAATGCACAAACGCAAAAGCAGATTGGAGAAAGTGAtacaaatcaacaaaaaaGTACAGAGATATCTACTCAGACTGAAAACAACAATGAAAATGATGATGAAACTGATGGTCAACTGTTTTACATACCTTTACAAGCTGTCACAAGAAATGGACCAAATTTAGTTCAAGGACAGCAATTAATTCAAGGTGTAGCTGTAAAACTCGGTACTGAAGGACCAAATGGTCCTAATCAAAAAGTTCTTTTAAGAGCAAAATTGGTTACTAAACCTCCATCATCAATTGCACGTTGTCCTCCTGTAGGAACAGTACAGCCTACAACTCGTACTCCACCTAATTCTACTTTAATAACAACTGATCATTCAATACCATCTACTTCTTCAAGTACAGTATCAACTGTTACTACATCTAATTCCGAACTTCAACCATCTACtccaaataaaaatgaaaacatgGTACAAATTGCAAATAGGCAAAATATTGGAACTGGATTAAATATAGGAACTGAAAAATTGCCAAAATCACCAAAAACTCctagagaaagaaaaacctCAATTGATTCAAATAAGAATGGGAAAAGATGTCAGATCAAAGCAAAACAGAAGGGTTCTGAAATTTATTCTCCCATCAATAATGTGACATTTCCAAGTgcaaaagatgaaaataatgaagCACGATTAGTTGAAGCTCCAACATTTCATCCTACTGAAAAAGATTTCCAAGATCCTTTAGAATACATAGATAAAATAAGGCCAATTGCAGAGAAATTTGGAATATGCAGAGTTGTACCACCACCTAATTTTAAACCGGAATGCAAAGTATCAGATGATATGAGGTTTACTGCTTACAATCAATATGTACATCGTATGTTACATAGATGGGGTCCCAATGTGAAAGAAATGATGgctataaagaaatatttagcTACACAAAGCATAACATTAACTCATCCACCTTGGATTGGTGGTATGGAAGTTGATTTGCCTCATTTATATCAAACAGTTCAAAGTTTAGGCGGATTAAAGGAAGtgattgaaaagaaaaagtggCAGAAAGTAGCTGATGGGATGAAAATACCAAAATCTGCTCAAGATCGTGTAACCAAATTGGATGACATTTACTGCAAATACTTATTACCATATGATACATTATCTCCAGAGGAACGAGGTAAATTATTTGATGAAGTCGAATCTGAGTggatgaaaagagaaagtAGAGTTTTACAAAGGCAAAATGCACCAATAAGTGAAAatgaagaagatgaagatgatGATAGTTCTGACGAAATTGAGGAATGCATCGTTAAAGGTAGAAACATGCCGTTAAACGCTTTTTATCGTATTGCACGAAACACACAACGTATGTGGTTTGGTGAAAATCAACGATCTGGAAACGAAACAGAAGGCGCTTCTGCTGATGAGGTTGAAAGTGCATTTTGGAAACATGTTGCAGAAAGGAAAAGACATGTTTGTGTACACGCTGCAAGCATTGATTCAAGTGGACGCGGTTTTGGATTTTCGGTTGCTAAAAATAGTCCGTTCGCAAGACATCCATGGAATCTTAAAGTACTTACTAATAACGCTGGCTCAGTACTGAGAGCTTTAGGTCCTATAATGGGTGTGACTGTACCAACACTTCATGTGGGTATGTTATTTAGTGCATGTTGTTGGTACCGTGATCCTCATGGTCTTCCTTGGATAGAATATTTGCATACTGGTGCTAAAAAAATTTGGTACGGTATACCCGACGAACACAACAATAACTTTAGAGAGGCTCTTTCAAAAATGGTTCCAcgatattgtaaaaataaaactatatGGCTGCCATCAGATACAGCAATGGTTCCTCCAGAATTATTGGTTAGTAACGGAGTATCACTATGCCAGACTGTTCAGGAACCAGGGCAATTTATAGTTGTATTTCCTAAAGCATTTACATCAAGTATATGCACTGGTTATGTAGTATCTGAAAGTGTTTACTTTGCACAACCATCCTGGTTAGAAACTGCTGAACAAGTATTTAAAgATATACAAGATAGTTGTGAACCATCAATCTTTTCATTtgaaagattattatttaatattattaatgacTCTAGATCTCATATAGAAGTATTAAAACAGATTCTAGCAagtgtaattaaaattcgtgaaaaagaaatagattaTCGTAAACAATTAGAATCAGTAGGTCTCATAAACACAGAAAGATTACCTTTACCAGATAGtggaaaacgaaagaaaggaaaaaaagtaaaagaagatGATGGCGACTTTGAATGTGAAACTTGTAGAGCTAATTTGTTTGTTTCATTAGTGAGTAATTCACAAGATGACAGTGTTTACTGTTTACCACATGCATTGcaattatttaatagaaagaaacaaattttaaaacattgtACTCTAATGTACACATACAACGAGGAGGAATTAAATGATTTGATCCATAAACTAGAAGAAAGAATTGAAGCCAAATCTAAAAAGACTAATCAAATCAAACAAACAAAGTAA
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNPSHTPIKDKEKTKPAVITELITHKRPNTEDFLTFLCFRGTPILPPSLNFFNVGSKKEKPDTKPARIATDKTISSTSTSIENQKPDSSQKSITKVKPIITDKKKVSNTIQKNITTFKSTTSTVQALKKKYQEQRLAKQRIKNKFKTSCVMRTRSCTERTLLKSVNKLAPRKFLPRVETKRLGLRSSVLADKTKTGPSKVKPVSSKPKKKVIVKQKNSDTSNSDSTSEEEEEGPLEKSVPQMKRTIQKAVQKNICTRSKSEMRRITRSHSGTISPKNLCRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSMDSFPELPNTRKTTQPENEIKTKVKQSVTKTTTKNRDNKITSIHNTSNKRLDKTKTNKIAFKSKRLIRVHKYCEIDSDEESVSSNATSNTRPVTRRSLGKLNKPVSRYLRSSTKNITTRMEIQNNISIKSKCQVQNNAKFNKEKFVTKRKREQSSTKSLPEKGNGLKQKELKDTEFEGTDSDEETLGMLLNKLKRKKDDNVQKEIVNKNNNQDIENKIEQSLNENFVKTDLSKISDDEESFRGFTKKAISKVLNSCQTHVNVNLLTTKKTSDKLETVKIENEQNSYVANKKVDKELSSNEPLLSINSPPVLNIPYNQHLQKSEKDKSELPDLISDEIEQEISTNTEKECHHKTEISSTNVIDMSLSTLHVRKEKVNMSTEQIEKWLNESSFAKEESKLEMENVSTFKYDVCEKKTDVSHLSISTKIQHLVRPVNVTLSKLAEKANVKDRMNTYNKYAPIITGELQSEIKQQNEFSNINININKQNTYLKDINKGRNIKPNKDSCPGEEGDSALKPDQNSTDSSNEKKISTEKKTIFQPRKPFLPKVKERKTVIPNANAFSPENESSVYAFESDTEIPVSTPFRRKVRESNKSNVIHNLSQMDVTKSENNTNKSENNSNKFDNAPNKSENNTNKFVNNANKSENNINKSASEVNKDVEEIIKDNCEMTIFKENSINNSAKNENEIVEIKNISNTTLNVNKFELPKNFATLANIQVLPLDKLTTTWSNVNCSTSIAVQVNLDDNAQTQKQIGESDTNQQKSTEISTQTENNNENDDETDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPVGTVQPTTRTPPNSTLITTDHSIPSTSSSTVSTVTTSNSELQPSTPNKNENMVQIANRQNIGTGLNIGTEKLPKSPKTPRERKTSIDSNKNGKRCQIKAKQKGSEIYSPINNVTFPSAKDENNEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVESEWMKRESRVLQRQNAPISENEEDEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNETEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILASVIKIREKEIDYRKQLESVGLINTERLPLPDSGKRKKGKKVKEDDGDFECETCRANLFVSLVSNSQDDSVYCLPHALQLFNRKKQILKHCTLMYTYNEEELNDLIHKLEERIEAKSKKTNQIKQTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01424161;
- 90% Identity
- iTF_00231784;
- 80% Identity
- -