Bbre008645.1
Basic Information
- Insect
- Bombus breviceps
- Gene Symbol
- JARID2
- Assembly
- GCA_014825925.1
- Location
- CM026185.1:8561549-8569279[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9 1.6e+04 -3.8 0.1 67 82 160 177 145 178 0.57 2 2 6.7e-23 1.5e-19 70.0 0.0 6 89 1396 1477 1392 1477 0.94
Sequence Information
- Coding Sequence
- atggTGTTAAGtcgaaatgataaaagaaaaaggaaagaaggagatTTGGTGGATCTTATGGAGCCACTCTCCGAATCTCCAAAgagGACCAAAGTACATGCACAAAGAAAATTTGCACAAGGTGCAACGACAGTTTTCAATCCTTCACATACTCCTATCAAGGATAAAGAAAAGACTAAACCAGCAGTTATAACAGAATTAATAACTCACAAACGACCAAATACAGAAGATTTCTTGACATTTTTGTGCTTTAGagGAACTCCAATTTTACCTCCAAgcttaaattttttcaatgttggaagtaaaaaggaaaagccaGATACTAAGCCAGCACGTATAGCAACAGATAAAACTATTTCTTCAACTAGTACATCTCTTGAAAATCAAAAACTAGATTCAAGTCAGAAAAGTATCACAAAAGTGAAACCTATTATTACTGACAAGAAGAAAGTCTCAAATacaatacagaaaaatattacaacatttaaaaGTACTACATCTACAGTACAAGCActcaaaaagaaatatcaagaaCAGCGTCTTGCTAAACAAagaatcaaaaataaatttaaaacatcaTGTGTTATGAGAACAAGATCTTGTACAGAACGAACGTTATTAAAATCTGTAAACAAATTAGCACCCAGAAAATTTTTACCAAGAATTGAAACTAAGAGACTTGGTTTACGAAGTAGTGTGCTTGcagataaaacaaaaacagGTCCTTCAAAAGTTAAACCTGTACCATCTAAACCAAAGAAGAAAGTTATagtaaaacaaaagaatagtGATACATCAAATTCTGATTCTACAtctgaagaagaagaagaaggtcCTTTGGAAAAATCAGCTCCACAGATGAAACGTACAATTCAAAAGACTGTGCAAAAAAACATATGTACAAGAAGTAAATCTGAAATGAGAAGAATTACACGTTCTCATAGTGGCACAATTTCCCCAAAAAATCTTTGTAGGAGACCAACAAGGAAAACTAAAGAAGCAGCTGCTGTATATATGGAAATTCTTGGACGGAAACTCGTAAGTCCTGATTTAGAAAATGatgataatatttctatgGACAGTTTTCCAGAATTACCAAATACACGTAAAACTACTCAACcagaaaatgaaatcaaaaCTAAAGTAAAACAATCTGTTACAAAAACAACtgctaaaaataaagataataaaattacttctATTCATAATACATCAAATAAACGATTGGATAAGAtcaaaactaataaaattgcttttaaaagtaaaagattaataagAGTTCACAAGTATTGTGAAATTGATAGTGATGAAGAATCTGTAAGTTCTAATGGCACTAGTAACACAAGACCTGTTACAAGAAGAAgtttaggaaaattaaataaacctGTAAGTCGATACCTTAGATCttctactaaaaatataaatacaagaatggagattcaaaataatataagtattAAATCAAAATGTCAAGTTCaaaataatgcaaaatttaataaagaaaaatttgtagctAAACGTAAACGAGAACAAAGCTCTACTAAATCATTACCTGAAAAAGGTAATGGacaaaagcaaaaagaattaaaggatACTGAATTTGAAAGTACAGATTCTGATGAAGAGACATTAGGAATGTTgctcaataaattaaaaagaaagaaagatgataATGTACAAAAGGagattgttaataaaaataacaatcaaGATATTCAGAATAAAATTGAGCAgtctttaaatgaaaattttgtaaaaaccgacctttcaaaaatatcagaTGACGAAGAATCTTTTCGGGGATTTACGAAGAAAGCAATATCCAAAGTATTAAACTCTTGTCAAACACATGTTAATGTTAATCTTCTGACCACGAAAAAGACCAGTGATAAATTAGAAACGgctaaaatagaaaatgaacaaaattcaTATGTAGCTGATAAAGAGGTAGATAAGGAATTGCCGAGTAATGAACCTTTACTAAGCATAAATCCTCCACCCGTATTAAATATACCATATAATCAGCATCTTCAAAAATctgaaaaagataaatcaGAGTTACCTGATTTAATATCTGATGAAATAGAACAAGAAATATcaacaaataatgaaaaagaatgtcATCATAAAACAGAGATTTCATCCACAAATGTTATAGATATGTCTTTATCAACATTGCATGTAAGGAAGGAGAAAGTAAATATGTCGActgaacaaattgaaaaatggtTAAATGAAAGTTCATTTGCTAAAGAGGAAAGTAAGttagaaatggaaaatgtgtCTACTTTTAAATATGATGTTTGTGAAAAAAAGACTGATGTATCACATTTAtcaatttcaacaaaaattcaaCATTTAGTAAGACCAGTTAATGTTACACTTTCTAAATTAGCAGAAAAGGCTAATGTAAAAGATCGCatgaatacatataataaatatgctCCCATTATAACAGGAGAATTACAATCTGATATAAAACAGCAGaatgaattttctaatattaatattaatattaacaaacagaatacaaatttaaaagatattaataaaggGCGGAACATAAAGCCAAATAAAGACTCATGTTCTGGAGAAGAAGGTGATAGTGCGCTAAAACCTGAGCAAAATTCTACAGATAATTCtaatgaaaaaaagatatcAACAGAGAAGAAAACCATATTTCAACCAAGAAAACCCTTTTTACCAAAAGTTAAAGAACGTAAAACAGTAACTCGTAATGCAAATGCATTCTCTCCGGAAAATGAAAGCAGTGTTTATGCATTTGAAAGTGACACAGAAATCCCTGTTAGTACTCCTTTTAGACGTAAAGCTCGAGAATCTAGTAAATCAAACGTGATTCATAATCTATCCCAGACGGATGTAActaaatctgaaaataatacaaataaatctgaaaacaattcaaataaatttgataacgctgcaaataaatctgaaaataatacaaataaatttgtcaataatgcaaataaatcagaaaataacataaataaatctgTGAGtgaagcaaataaaaatgtagaaagaataattaaagataattgtgaaatgacaatatttaaagaaaattccatCAATAATTCtgcaaaaaatgaaaatgaaatagtagaaataaaaaatatatcgaatacaacattaaatgtaaacaaatttgaattaccaaaaaattttgcaacttTGGCTAATATACAAGTTTTACCATTAGATAAATTAACAACAACTTGGAGTAATGTAAATTGTAGTACTTCAATAGCTGTACAAGTAAATCTTGATGATAATGCACAAATACAAAAGCAGATTGGAGAAAGTGATACAAATCAACAAAAAAGTACGGAGATATCTACTCAGACTGAAagcaataatgaaaatgatgaTGAAAATGATGGTCAACTGTTTTATATACCTTTACAAGCTGTCACAAGGAATGGACCAAATTTAGTTCAAGGACAGCAATTAATTCAAGGTGTAGCTGTAAAACTCGGTACTGAAGGACCAAATGGTCCTAATCAAAAAGTTCTTTTAAGAGCAAAATTGGTTACTAAACCTCCATCATCAATTGCACGTTGTCCTCCTGTAGGAACAGTACAGCCTACAACTCGTACTCCACCTAATTCTACTCTAATAACTGATCATTCAATACCATCTACTTCTTCAAGTACAGCATCAACTGTTACTACATCTAATTCTGAACTTCAACCATCTActccaaataaaaatgaaaatatagtaCAAATTGCAAATAGGCAAAATATTGGATTAAATATAGGAACTGAAAAATTGCCAAAATCACCAAAAACTcctagagaaagaaaaacctCAATCGATTCAAATAAGAATGGGAAAAGatGTCAGATCAAAGCAAAACAGAAGGGTTCTGAAATTTATTCTCCCATCAATAACGTAACATTTCCAAGTgcaaaagatgaaaataatgaagCACGATTAGTTGAAGCTCCAACATTTCATCCTACTGAAAAAGATTTCCAAGATCCTTTAGAATACATAGACAAAATAAGGCCAATTGCAGAGAAATTTGGAATATGCAGAGTTGTACCACCACCTAATTTTAAAcCGGAATGCAAAGTATCAGATGATATGAGGTTTACTGCTTATAATCAATATGTACATCGTATGTTACATAGATGGGGTCCCAATGTGAAAGAAATGATGgctataaagaaatatttagcTACACAAAGCATAACATTAACTCATCCACCTTGGatTGGTGGTATGGAAGTTGATTTGCCTCATTTATATCAAACAGTTCAAAGTTTAGGTGGATTAAAAGAAGtgattgaaaagaaaaagtggcAGAAAGTAGCTGATGGGATGAAAATACCAAAATCTGCTCAAGATCGTGTAACCAAATTGGATGACATTtactgcaaatatttattaccatATGATACATTATCTCCAGAGGAACGAGGTAAATTATTTGATGAAGTCGAATCTGAGTggatgaaaagagaaagtagAGTTTTACAAAGGCAAAATGCACCAATAagtgaaaatgaagaagatgaagatgatGATAGTTCTGACGAAATTGAGGAATGCATCGTTAAAGGTAGAAACATGCCATTAAACGCTTTTTATCGTATTGCACGAAACACACAACGTATGTGGTTTGGTGAAAATCAACGATCTGGAAACGAAACAGAAGGCGCTTCTGCTGATGAGGTTGAAAGTGCATTTTGGAAACATGTTGCAGAAAGGAAAAGACATGTTTGTGTACACGCTGCAAGCATTGATTCAAGTGGACGTGGTTTTGGATTTTCGGTTGCTAAAAATAGTCCGTTCGCAAGACATCCATGGAATCTTAAAGTACTTACTAATAACGCTGGCTCAGTACTGAGAGCTTTAGGTCCTATAATGGgTGTGACTGTACCAACACTTCATGTGGGTATGTTATTTAGTGCATGTTGTTGGTACCGTGATCCTCATGGTCTTCCTTGGATAGAATATTTGCATACTGGTGCTAAGAAAATTTGGTATGGTATACCCGACGAACACAACAATAACTTTAGAGAGGCTCTTTCAAAAATGGTTCCacgatattgtaaaaataaaactatatgGCTGCCATCAGATACAGCAATGGTTCCTCCAGAATTATTGGTTAGTAACGGAGTATCACTATGCCAGACTGTTCAGGAACCAGGGCAATTTATAGTTGTATTTCCTAAAGCATTTACATCAAGTATATGCACTGGTTATGTAGTATCTGAAAGTGTTTACTTTGCACAACCATCCTGGTTAGAAACTGCTGAGCAAGTATTTAAAgaTATACAAGATAGTTGTGAACCATCAATCTTTTCATttgaaagattattatttaatattattaatgactCTAGATCTCATATAGAAGTATTAAAACAGattctagcaagtgtaattaaaattcgtgaaaaagaaataaattatcgtaaacAATTAGAATCAGTAGGTCTCATAAACACAGAAAGATTACCTTTACCAGATAgtggaaaacgaaagaaaggaaaaaaagtaaaagaagatGATGGCGACTTTGAATGTGAAACTTGTAGAGCtaatttgtttgtttcatTAGTGAGTAATTCACAAGATGACAGTGTTTACTGTTTACCACATGCATTGCAATTATTTgatagaaagaaacaaattttaaaacattgtaCTCTAATGTACACATACAATGAGGAGGAATTAAATGATTTGATCCATAAACTAGAAGAAAGAATTGAAGCCAAATCTAAAAAGACTAATCAAATCAAACAAACAAAGTAA
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATTVFNPSHTPIKDKEKTKPAVITELITHKRPNTEDFLTFLCFRGTPILPPSLNFFNVGSKKEKPDTKPARIATDKTISSTSTSLENQKLDSSQKSITKVKPIITDKKKVSNTIQKNITTFKSTTSTVQALKKKYQEQRLAKQRIKNKFKTSCVMRTRSCTERTLLKSVNKLAPRKFLPRIETKRLGLRSSVLADKTKTGPSKVKPVPSKPKKKVIVKQKNSDTSNSDSTSEEEEEGPLEKSAPQMKRTIQKTVQKNICTRSKSEMRRITRSHSGTISPKNLCRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNISMDSFPELPNTRKTTQPENEIKTKVKQSVTKTTAKNKDNKITSIHNTSNKRLDKIKTNKIAFKSKRLIRVHKYCEIDSDEESVSSNGTSNTRPVTRRSLGKLNKPVSRYLRSSTKNINTRMEIQNNISIKSKCQVQNNAKFNKEKFVAKRKREQSSTKSLPEKGNGQKQKELKDTEFESTDSDEETLGMLLNKLKRKKDDNVQKEIVNKNNNQDIQNKIEQSLNENFVKTDLSKISDDEESFRGFTKKAISKVLNSCQTHVNVNLLTTKKTSDKLETAKIENEQNSYVADKEVDKELPSNEPLLSINPPPVLNIPYNQHLQKSEKDKSELPDLISDEIEQEISTNNEKECHHKTEISSTNVIDMSLSTLHVRKEKVNMSTEQIEKWLNESSFAKEESKLEMENVSTFKYDVCEKKTDVSHLSISTKIQHLVRPVNVTLSKLAEKANVKDRMNTYNKYAPIITGELQSDIKQQNEFSNINININKQNTNLKDINKGRNIKPNKDSCSGEEGDSALKPEQNSTDNSNEKKISTEKKTIFQPRKPFLPKVKERKTVTRNANAFSPENESSVYAFESDTEIPVSTPFRRKARESSKSNVIHNLSQTDVTKSENNTNKSENNSNKFDNAANKSENNTNKFVNNANKSENNINKSVSEANKNVERIIKDNCEMTIFKENSINNSAKNENEIVEIKNISNTTLNVNKFELPKNFATLANIQVLPLDKLTTTWSNVNCSTSIAVQVNLDDNAQIQKQIGESDTNQQKSTEISTQTESNNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPVGTVQPTTRTPPNSTLITDHSIPSTSSSTASTVTTSNSELQPSTPNKNENIVQIANRQNIGLNIGTEKLPKSPKTPRERKTSIDSNKNGKRCQIKAKQKGSEIYSPINNVTFPSAKDENNEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVESEWMKRESRVLQRQNAPISENEEDEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNETEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILASVIKIREKEINYRKQLESVGLINTERLPLPDSGKRKKGKKVKEDDGDFECETCRANLFVSLVSNSQDDSVYCLPHALQLFDRKKQILKHCTLMYTYNEEELNDLIHKLEERIEAKSKKTNQIKQTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01424161;
- 90% Identity
- iTF_00231784;
- 80% Identity
- -