Bmus008934.1
Basic Information
- Insect
- Bombus muscorum
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963971185.1
- Location
- OZ020131.1:12575061-12579335[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.26 7.1e+03 -2.7 0.3 149 181 385 414 368 427 0.72 2 3 0.38 1e+04 -3.3 4.4 63 103 442 482 404 542 0.51 3 3 3.1e-101 8.4e-97 323.9 8.8 1 218 787 997 787 997 0.92
Sequence Information
- Coding Sequence
- ATGGAATTACCTTCGGCTCCGGATCGTCCTTTAGAAGCCCAAGAAGGTTCTACCTCGGCTGATTTAGCGGAAACGGTTAGTGGTGGTGCATTGACTGTAGAATCAGCGCCAACGATTGGTGCGTTGACGACAGTGTCGTCGTCAACTACATCGGAAAACGGACCAACGAAGCGCGACAATGATGCCGATTCTTTGATGGCTACAACCGAAGAAATACACGATGCTACTCGTCAATCCGTCGATAACCAAGTGTTCAACAATCTAGAATTATGTGAGGCTTCGGTCAAGACCTCGAACGACTTTTCACACGGCGAAGGTCAATTAGACTTCTCCGATATGGGTCTGAAACTTGGGAAAGATAAGACGCAACCTGAAGACGCGGGTAACGATGTAGAAGTGAAATCGAGCGAATCCGTGGATGAACAAGATTGTTCGACGTCGACGCCGACGCCGACGCTGACGCTGACGCCGACGCTAACGCCGACGCCGACGCCGACGCCGACGCTGACGTCGATGTCGATGTCGTTGTCGGTTCAGTGTACCGAGAAACAGACAGACGATTCTAAAGTGGATGATAGTTTCGGTACAGGATTTGCCACCTTATCGCCGTTGTGTAGAAAAAGGTCAGCCAACGATTTTCTGCCGATCAATGCGGAGATCAAGCGGATCGGCGTTGAAATTTCGGAGAATGAATCGAATCAAGTAAGAAGCGACGTGAGGAGGATCTCACCGGTGTTGGTGAGCCTCCGAGAGCGTACCCTGGGTGAGATATCCCTGTCGTCGAACTCGTGCCTGTTCGACGACGATGTCAACAGTCGATGTATCTCAAGGAACAATAGGATTATCGATGATTTATTAACGAGTGGTTGTAGGTTATCAACGAATGTAAGCGTGGACGGTTCTTCTCAAACGAATCACGGTTCCGAGGAGATAAGCTGTACCGAGCCGGAGCATAGGGTCTGCGGAGTAGCGACGTCGCCGGAAGGTGAATGTACCAACGGCAGCGTCGAGGAGGCGCTGGTAGAGCCCTGTAAAAAGCTCGAATACTCGGACTCGTTTATTGACGAGGATTCTTGTTGTTCGCTGTCGCGCGACAGCCCCGAGAGAAATCTCAGCAAGTGCCAGGAACCGAAACAGTGCGAGGAGCCTGTCGAGGAGTGCTCGTGTAACGATACTATGCCTACGAATAGTGCTTGCACAACACCGAGTTTGAACAAGCAGATGATGAAAAGTTCGTTACCCCAATTAATGGTTAAGATAGATGCCATTAATATGTCGCAGTACTTCTCACCAGAACAGAAAGATGCGAAATATATGACCGTCACctcgaagaagaaacagaagaagaaCACCACGTGCAAGGCTGATGATAGCAACGTAGATGTAAGGATTGATTCCAAAGATACGTCGAAGAAAGTATGTTCCGTTGAAAGGCGAGATTGCGAGATCAGTGTCCAAAAGACTGAGTCACAGGACCATAAGGAGAAGAAGGACGATTCTCCTGTAGTATCCGATCTGCAACAGACCAAATTGATAAAATCAACTCCCACTATCTCTTTGAAGAAATGCAAGGTGATCTTGCAAAGGATAACATTGCCGAAGACGGTAAAAGCGGCGACGGAAGAGGAGccggaaaaagaagaaacgccAGCCACATCGGTAATAGAGAAATTAGCAGAGGATGAGGAAGTAGTGTTTTCCTTGCCTTTACCCTCCACGGAGGATTTACAGCCGTTGAACAATTTGGATTCGTCTGAAACGACACCAAGTTCACCGGAGATGTTGGAACCTACCACGGATGTCCCAGAAGCTATTGATACAGAGACGGAAACAGAAACCGGGTCCGATAGCTCCGAAATGTCAACCACGACAAATGTACGTGGATGTGAGGATGATACCGCTTCTGATCAAATATCGTGTCAGGAGAACGAGTCCATGTGCTGCGTTGATATTAATCCGGAGATCATATCGAGGTTGGAGCCAGAGAGACCGGAAGCTTTTACAGAAGATTCAGCGGAAAGCCTAGCGCTTGCCACTGGTGCGCGGGACGAAGTTAGATCGGATGGAAGCGATTCTGGTTTAGGAAGCGAGATACCCGGTGATCCTGGGCCTGCACCGGTTCCCGAAAGCGATTCCGAAACTTCTTTCTTGGATAGGATACCCGATGATATTCTCTCCGATAAAGAAAAAGTTGTGAATCAATTGGACAGTTTTGTACCGAATGTGGGTGTACCTGGTACACCACAACCACCATTGACGAATTTTCGGAGCCCTCCAAAGAGTAATTTAAAACGAAGATTGATAGATTGCATGGACGAGGCTCCTAGTCCAAAGAGAAGCAATACAGAAGAATctatgaaaaagaaacgcaATATTCAATTCGACGCTGTCACCGTGTATTATTTTCCCAGGGCACAGGGTTTCACTTGTGTGCCTTCTcaggGTGGCAGCACCCTTGGCATGAGTGCGACGCATACTCATGCAGAACGGTTCTCGTTATCGGAGCATGCTGCTGAACAGAGGCGAATTCATCGTGCTAGACTAGCTCAATTGCGCTCCGAGCGTGCTGCAAATTGCGTATCGGAAGCAGCCTCCAGCTCCGAGGATCCGAGCGATGATACGGACGAGGAACAAAGTGATAACGAAGAACTGGATATCGATAGTTATTATTTCCTGCAGCCGGTACCTACGTGGCAGAGACGAGCTTTACTTAGGGCGGCTGGAGTACGTAGAATAGATGCCGTCGAAAAGGACGAGTGCCGTGACATTAGAGCTAGCAGAGAACATTGCGGTTGTGGGTGCAAAGGATATTGCGATCCAGAGAGTTGTCCTTGTAGTCGAGCTAATGTAAAGTGCCAGGTTGATAGAGCGGGTTTTCCTTGTGGATGTACCCGAGATGGTTGTGCGAATAGTTCAGGCAGGATTGAGTTCAATCCAGTACGAGTGCGAACGCATTTCATTCATACTCTTATGCGACTGGAGTTAGAAAAAAAGCAACGAGAAGAAGAGGGTACAGATCACGACGCGTCCGACAATCAAAACGGCAGAAGTCCTTTGAGAGAAATCAATTTGGGATCCGTGATGGAGAATAGGACCACGGAATCGTGCTTGAACGGTGGTGGATTTACGACGCTTCATTACGAAAATCACGACGCTAGGGACGGCGGGACGAATTGTCAGCCAGAAGTACCTGGTACGAGAGAGGATAGTCTGGATCTTTACGCAATTAGAGACGATTGCTATCCTAACGAAGACACTGTTGATGGTACGCAGGGACCTCAAAGGAAACTTCATCCTGAATTTAGTCAAGCTTTTCAAACGTTCTCAGGCCAAACAAGTGCCGGAGTAAACTTTCAACAGCCTACTTATCAGGACTATCAACCTTACGCTAACCTTCCTTCTACATCTAGGGTGCAATTTCAGCCGCAATTCCAAACGGTGCCAGGAAATCCAGGGTTCTCACACTATGCGCCTTATGGGCAAGACGCCGGATCAATTCAGGGAAACTGCCAGGTCCATCCCGGACAACACTCATCCAGTTACGAAACTAGCTTTGCCCAGGACGAAACAACCGGATCACAATACACGAATTTAAATTCGGTGCAGCCGATGAATACAGTGGTTCAACAAATAGGTAAACTAGAACCATTTTCAGAACTTTTGTCTGGTAGATATTCGTACTATGGTGAAATGGAGCCGGCGGCTCATGGTACTTATCACGGGAATGGAACCAAGGTCGAGGTAGAAAAGAACCAAGGTAACGAACAACAATCGGAAAGTACGGAAGAGTGTGACGAAAACTTTGgggaaattattaaaaagtcaATGGTTGAGACTGTATCCGCCTAG
- Protein Sequence
- MELPSAPDRPLEAQEGSTSADLAETVSGGALTVESAPTIGALTTVSSSTTSENGPTKRDNDADSLMATTEEIHDATRQSVDNQVFNNLELCEASVKTSNDFSHGEGQLDFSDMGLKLGKDKTQPEDAGNDVEVKSSESVDEQDCSTSTPTPTLTLTPTLTPTPTPTPTLTSMSMSLSVQCTEKQTDDSKVDDSFGTGFATLSPLCRKRSANDFLPINAEIKRIGVEISENESNQVRSDVRRISPVLVSLRERTLGEISLSSNSCLFDDDVNSRCISRNNRIIDDLLTSGCRLSTNVSVDGSSQTNHGSEEISCTEPEHRVCGVATSPEGECTNGSVEEALVEPCKKLEYSDSFIDEDSCCSLSRDSPERNLSKCQEPKQCEEPVEECSCNDTMPTNSACTTPSLNKQMMKSSLPQLMVKIDAINMSQYFSPEQKDAKYMTVTSKKKQKKNTTCKADDSNVDVRIDSKDTSKKVCSVERRDCEISVQKTESQDHKEKKDDSPVVSDLQQTKLIKSTPTISLKKCKVILQRITLPKTVKAATEEEPEKEETPATSVIEKLAEDEEVVFSLPLPSTEDLQPLNNLDSSETTPSSPEMLEPTTDVPEAIDTETETETGSDSSEMSTTTNVRGCEDDTASDQISCQENESMCCVDINPEIISRLEPERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPVPESDSETSFLDRIPDDILSDKEKVVNQLDSFVPNVGVPGTPQPPLTNFRSPPKSNLKRRLIDCMDEAPSPKRSNTEESMKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVSEAASSSEDPSDDTDEEQSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEGTDHDASDNQNGRSPLREINLGSVMENRTTESCLNGGGFTTLHYENHDARDGGTNCQPEVPGTREDSLDLYAIRDDCYPNEDTVDGTQGPQRKLHPEFSQAFQTFSGQTSAGVNFQQPTYQDYQPYANLPSTSRVQFQPQFQTVPGNPGFSHYAPYGQDAGSIQGNCQVHPGQHSSSYETSFAQDETTGSQYTNLNSVQPMNTVVQQIGKLEPFSELLSGRYSYYGEMEPAAHGTYHGNGTKVEVEKNQGNEQQSESTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00233222;
- 90% Identity
- iTF_00219791; iTF_00224545; iTF_00216387; iTF_00233222; iTF_00230022; iTF_00228659; iTF_00231976; iTF_00223867; iTF_00219105; iTF_00229346; iTF_00227267; iTF_00221252; iTF_00215014; iTF_00217065; iTF_00218409; iTF_00225228; iTF_00217741; iTF_00231311; iTF_00221904; iTF_00214386; iTF_00215700; iTF_00225908; iTF_00222518; iTF_00232598; iTF_00227960; iTF_00220572; iTF_00226588; iTF_00230684;
- 80% Identity
- -