Bbif002424.1
Basic Information
- Insect
- Bombus bifarius
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_011952205.1
- Location
- NW:1735506-1743736[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 1.1e+04 -11.0 7.3 145 168 375 402 367 404 0.56 2 3 0.14 1.5e+03 -1.9 1.2 96 118 469 490 433 560 0.52 3 3 3.2e-101 3.3e-97 323.9 8.8 1 218 802 1012 802 1012 0.92
Sequence Information
- Coding Sequence
- ATGGAATTGCCTTCGGCTCCAGATCGTCGTTTAGAAGCTCAAGAAGGTTCTACCTCGGCTGATTTAGCGGAAACGGTTAGTGGTGGTGCATTGACTATAGAATCAGCGAAAACGATTGGTGCGTCGACGACAGTGTCGTCGTCAACTACATCGGAGAACGGATCAACGAAGCGCGACAATGATGCCGATTCTTCGATGGCTACCGAAGAAATACGCGATGCTACTCGTCGATCCGTCGACAACCAAGTGTTCATCAATCTAGAATTATGTGAGGCTCCGGTCGAGACCTCGAACAACTTTTCACACGGCGAAGGTCAATTAGACATCTCCGGTATGGGTCTGAAACTTGGAAAAGATAAGACGCAACCTGAAGATGCGGGTATCGATGTAGAGGTGAAATCGAACGAATCCGTGGATGAACAAGATTGTTCGATGTCGACGCCGACGCCGATGCCGACGCTGACGTTGACGCCGACGCTAACGCCGACGCTGACGCCGACGCTGATACTGACGCCGACGCCGACGCCGACGCCGACGCCGACGCCAACGTCGATGTCGTTGTCGGTTCAGTGTACCGAGAAAGAGACAGACGATTCTAAAGTGGATGATAGCTACGGTGCAGGATTCACCACCTCATCGCCGTTGTGTAGAAAAAGACCGCCCAGCGATTTTTTGCCGATCAATGCGGAGATCAAGCGGATCGGCGTTGAAATTTCGGAGAATGAATCGAATCAAGTAAGAAGCGACGTGAGGAGGATCTCACCGGTGTTGGTGAGCCTCCGAGAGCGTACCCTGGGTGAGATATCCCTGTCGTCGAACTCGTGCCTGTTCGACGACGATGTCAACAGTCGATGCATCTCAAGGAACAATAGGATTATCGATGATTTATTAACGAGTGGTTGTAGGTTATCAACGAATGTAAGCGTGGACGGTTCTTTTCAAACGAATCACGGTTCCGAGGAGATAAGCTGTACCGAGTCGGAGCATAGGGTCTGCAGAGTAACGACGTCGCCGGAAGGTGAATGTACCAACGGCAGCGTCGAGGAGGCGCTGGTAGAGCCCTGTAAAAAGCTCGAATACTCGGACTCGTTTATTGATGAGGATTCTTGTTGTTCGCTGTCGCGCGACAGCCCCGAGAGAAATCTCAGCAAGTGCCAGGAACCGAAACAGTGCGAGGAGCCCATCGAGGAGTGCTCGTGTAGCGACACTATGCCTGCGAATAGTGCTTGCACAGCACCGGTTATAAACAACAAGCAGTTGATTGAAATGATGAAAAGTTCTTTACCCCAATTAGTGGTTAAGATAGATCAGATTAATGTGTCGCAGTACTTCTCACCGGAACAGAAAGATGCGAAATGTATGACCGTCGCCtcgaagaagaagcagaagaagaacACCACGTGCAAGGCTGATGATAGCAACGTAGATGTAAGGATTGATCCCAAAGATACGTCGAAGAATGTATGTTCCGTTGAAAGGCGAAATTGCGAGGTCAGTGTCCAAAAGACTGAGTCACAGGACCATAAGGAGAAGAAGGACGATTCTCCTGCAGTATTCGATCTGCTACAGACCAAATTGATAAAATCAACTCCCATTATTTCTATGAAAGAATGCAAGGTGATCTTGCAAAGGATAACATTGCCGAAAACGGTAAAAGCGACGACGGAGGAGAAACCGGAACAAGATGAAACGCCAGCCACATCGGTAATAGAGAAATTAGCAGAGGATGAAGAAGTCGTGTTTTCCTTGCCTTTACCCTCCACGGAGGATTTACAGCCGTTGAACAATTTGGATTCGTCTGAAACGACACCAAGTTCACCGGAGATGTTGGAACCTACCACGGATGTCCCAGAAGCTATTGACACAGAGACGGAAACCGAAACCGGGTCCGATAGCTCCGAAATGTCAACCACGACCAATGTACGTGGATGTGAGGATGATACCGCTTCTGATCAAATATCGTGTCAGGAGAACGAGTCCATGTGCTGCGTTGATATTAATCCGGAGATCATATCGAGGTTGGAGCCTGAGAGGCCGGAAGCTTTTACAGAAGATTCAGCGGAAAGTCTAGCGCTTGCCACTGGTGCGCGGGACGAAGTTAGATCGGATGGAAGCGATTCTGGTTTAGGAAGCGAGATACCCGGTGATCCTGGGCCTGCACCGGTTCCCGAAAGCGATTCCGAAACTTCTTTCTTGGATAGGATACCCGATGATATTCTCTCCGATAAAGAAAAAGTTGTGAATCAATTGGACAGTTTTGTACCGAATGTGGGTGTACCGGGTACACCACAACCATCATTGACGAATTTTCGGAGTCCTCCAAAGAGTAATTTAAAACGAAGATTGATGGACTGCATGGATGGGGCTCCTAGTCCGAAGAGAAGCAATACGGAAGAAACcatgaaaaagaaacgcaaTATTCAATTCGACGCTGTCACCGTGTATTATTTTCCCAGGGCACAGGGTTTCACTTGTGTACCTTCTCAggGTGGCAGCACCCTTGGCATGAGTGCGACGCATACTCATGCAGAACGGTTCTCGTTATCGGAGCATGCTGCTGAACAGAGGCGAATTCATCGTGCTAGACTAGCTCAATTGCGCTCCGAGCGTGCTGCAAATTGCGTATCGGAAGCAGCCTCCAGCTCCGAGGATCCCAGCGATGATACGGACGAGGAACAAAGTGATAACGAAGAACTGGATATCGATAGTTATTATTTCCTGCAGCCAGTACCTACGTGGCAGAGACGAGCTTTACTTAGGGCGGCTGGAGTACGTAGAATAGATGCTGTCGAAAAGGACGAGTGCCGTGACATTAGAGCTAGCAGAGAACATTGCGGTTGCGGGTGCAAAGGATATTGCGATCCAGAGAGTTGTCCTTGTAGTCGAGCTAATGTAAAGTGCCAGGTTGATAGAGCGGGTTTTCCTTGTGGATGTACCCGAGATGGTTGTGCGAATAGTTCAGGCAGGATTGAGTTCAATCCAGTACGAGTGCGAACGCATTTCATTCACACTCTCATGCGGCTGGAGTTAGAAAAAAAGCAACGAGAAGAAGAGAGTACGGATCACGACACTTCCGACAATCAAAACGGCAGAAGTCCGTTAAGAGAAATCAATTTGGGATCCGTGATGGAGAATAGGACCACAGAATCGTGTCTGAACAGTGGTGGATTTACGACGCTTCATTACGAAAATCACGACGCTAGGGACGGCGGGACGAATTGTCAGCCAGAAGTACCTGGTACTAGAGAGGATAGTCTGGATCTTTACGCAATTAGAGACGATTGCTATCCTAACGAAGACACTGTTGATGGTACGCAGGGACCTCAAAGGAAACTTCATCCTGAGTTTAGTCAAGCTTTTCAAACGTTCTCAGGCCAAACAAGTACCGGAGTAAACTTTCAACAGCCTACTTATCAGGACTATCAACCTTACGCTAACCTTCCTTCTACATCTAGGGTGCAATTTCAGCCGCAATTTCAAACGGTGCCAGGAAATCCAGGGTTCTCACACTATGCGCCTTATGGGCAAGACGCCGGATCAATTCAGGGAAACTGCCAGGTCCATCCCGGACAACACTCATCCAGTTACGAAACTAGCTTTGCCCAGGACGAAACAACCGGATCACAATACACGAATTTAAATTCGGTGCAGCCGATGAATACAGTGGTTCAACAAATAGGTAAACTAGAACCATTTTCAGAACTTTTGTCTGGTAGATATTCGTACTATGGTGAAATGGAGCCCGCGGCGCATGGTACTTACCACGGGAATGGAACCAAGGTCGAGGTAGAAAAGAACCAAGGTAACGAACAACAATCGGAAAGTACGGAAGAGTGTGACGAAAACTTTggggaaattattaaaaagtcaATGGTTGAGACTGTATCCGCCTAG
- Protein Sequence
- MELPSAPDRRLEAQEGSTSADLAETVSGGALTIESAKTIGASTTVSSSTTSENGSTKRDNDADSSMATEEIRDATRRSVDNQVFINLELCEAPVETSNNFSHGEGQLDISGMGLKLGKDKTQPEDAGIDVEVKSNESVDEQDCSMSTPTPMPTLTLTPTLTPTLTPTLILTPTPTPTPTPTPTSMSLSVQCTEKETDDSKVDDSYGAGFTTSSPLCRKRPPSDFLPINAEIKRIGVEISENESNQVRSDVRRISPVLVSLRERTLGEISLSSNSCLFDDDVNSRCISRNNRIIDDLLTSGCRLSTNVSVDGSFQTNHGSEEISCTESEHRVCRVTTSPEGECTNGSVEEALVEPCKKLEYSDSFIDEDSCCSLSRDSPERNLSKCQEPKQCEEPIEECSCSDTMPANSACTAPVINNKQLIEMMKSSLPQLVVKIDQINVSQYFSPEQKDAKCMTVASKKKQKKNTTCKADDSNVDVRIDPKDTSKNVCSVERRNCEVSVQKTESQDHKEKKDDSPAVFDLLQTKLIKSTPIISMKECKVILQRITLPKTVKATTEEKPEQDETPATSVIEKLAEDEEVVFSLPLPSTEDLQPLNNLDSSETTPSSPEMLEPTTDVPEAIDTETETETGSDSSEMSTTTNVRGCEDDTASDQISCQENESMCCVDINPEIISRLEPERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPVPESDSETSFLDRIPDDILSDKEKVVNQLDSFVPNVGVPGTPQPSLTNFRSPPKSNLKRRLMDCMDGAPSPKRSNTEETMKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVSEAASSSEDPSDDTDEEQSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEESTDHDTSDNQNGRSPLREINLGSVMENRTTESCLNSGGFTTLHYENHDARDGGTNCQPEVPGTREDSLDLYAIRDDCYPNEDTVDGTQGPQRKLHPEFSQAFQTFSGQTSTGVNFQQPTYQDYQPYANLPSTSRVQFQPQFQTVPGNPGFSHYAPYGQDAGSIQGNCQVHPGQHSSSYETSFAQDETTGSQYTNLNSVQPMNTVVQQIGKLEPFSELLSGRYSYYGEMEPAAHGTYHGNGTKVEVEKNQGNEQQSESTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00233222;
- 90% Identity
- iTF_00223182;
- 80% Identity
- -