Bsko002818.1
Basic Information
- Insect
- Bombus skorikovi
- Gene Symbol
- CSRNP3
- Assembly
- GCA_014737355.1
- Location
- JACXIH010000034.1:2859167-2863467[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.078 1.5e+03 -1.0 3.6 70 115 462 511 420 551 0.40 2 2 3.1e-101 6.1e-97 323.9 8.8 1 218 787 997 787 997 0.92
Sequence Information
- Coding Sequence
- ATGGAATTACCTTCGGCTCCGGATCGTCTTTTAGAAGCCCAAGAAGGTTCTACCTCGGCTGATTTAGCGGAAACGGTTAGTGGTGGTGCATTGACTGTAGAGACAGCGGCAACGATTGGTGCGTTGACGACAGTGTCGTCGTCAACTACATCGGAAAACGGACCAACGAACCGCGACGACGACGATGCCGATTCTTTGATGGCTACGACCGAAGAAGTACACGATGCTACTCGTCGATCCGTCGATAACCAAGTGTTCATCGATATAGAATTATGTGAGGCTTCGGTCAAGACCTCGAACGACTTTTCACACGGCGAAGGTCAATTAGACTTCTCCGATATGGGTCTGAAACTTGGGAAAGATAAGACGCAATCTGAAGACGCGGGTAACGATGTAGAAGTGAAATCGAGCGAATCCGTGGACGAACAAGATTCTTCGACGCCGACGCCGACGCCGACGCCGACGCTAACGCCGACGCCGACGTCGATGTCGATGTCGATGTCGTTGTCGGTTCAGTGTACCGAGAAACAGACAGACGATTCTAAAGTGGATGATAGTTGCGGTGCAGAATTCACCGCCTCATCGGCGTTGTGTAGAAAAAGGCCGCCCAGCGATTTTCTGCCGATCAACGCGGAGATCAAGCGGATCGGCGTTGAAATTTCGGAGAATGAATCGAATCAAGTAAGAAGCGACGTGAGGAGGATCTCACCGGTGTTGGTGAGCCTCCGAGAGCGTACGCTGGGTGAGATATCCCTGTCGTCGAACTCGTGCCTGTTCGACGACGATGTCAACAGTCGATGTATCTCAAGGAACAATAGGATTATCGATGATTTATTAACGAGTGGTTGTAGGTTATCAACGAATGTAAGCGTGGACGGTTCTTCTCAAACGAATCACGGTTCCGAGGAGATAAGCTGTACCGAGCCGGAGCATAGGGTCTGCGGAGTAGCGACGTCGCCGGAAGGTGAATGTACCAACGGCAGCGTCGAGGAGGCGCTGGTAGAGCCCTGTAAAAAGCTCGAATACTCGGGCTCGTTTATCGACGAGGATTCTTGTTGTTCGCTGTCGCGCGACAGCCCCGAGAGGAATCTCAGCAAGTGCCAGGAACCGAAACAGTGCGAGGAGCCCGTCGAGGAGTGCTCGTGTCACGACACTATGCCTACGAATAGTGCTTGCACAACACCGGTTATAAACAACAAGCAGACGGTTGAAACGATGAAAAGTTCGTTACCCCAATTAGTGGTTAAGATAGATCCCATTAATATGTCGCAGTACTTCTCACCGGAACAGAAAGACGCGAAATATATGACCGTCGCCTCGAAGAAGAAGCAGAAGAAGAACACCACGTGCAAGGCTGACGATAGCAACGTAGATGTAAGGATCGATTCCAAAGATACGTCGCAGAAAGTATGTTCCGTTGAAAGGCGAAATAGCGAGATCGGTGACCGAAAGACTGAGTCACAGGACCATAAGGAGAAGAAGGACGATGCTGCTATAGTATCCGATCTGCAACAGACCAAATTGATTAAACCAATTCCCAGAGATAATGGTATGTCTACGAAGAAATGCAAGGTGCTCCTGCAAAGGATAACATTGCCGAAGACGGTAAAAGCGACGACGGAAGAGAAGCCGGAAAAAGAAGAAACGCCAGCCACATCGGTAATAGAGAAATTAGCGGAGGATGAGGAAGTCGTGTTTTCCTTGCCTTTACCATCCACGGAGGATTTACAGCCGTTGAACAATTTGGATTCGTCTGAAACGACACCAAGTTCACCGGAGATGTTGGAACCTACCACGGATGTCCCAGAAGCTATTGACACAGAGACGGAAACCGAAACCGGGTCCGATAGCTCCGAAATGTCGACCGCGACTAACGTACGTGGATGCGAGGATGATACCGCTTCTGATCAAATATCGTGTCAGGAGAACGAGTCCATGTGCTGCGTTGATATTAATCCGGAGATCATATCGAGGTTGGAGCCAGAGAGGCCGGAAGCTTTTACAGAAGATTCAGCGGAAAGCCTAGCGCTTGCCACTGGTGCCCGGGACGAAGTTAGATCGGATGGAAGTGATTCTGGTTTAGGAAGCGAGATACCCGGTGATCCTGGGCCTGCACCGGTTCCCGAAAGCGATTCCGAAACTTCTTTCTTGGATAGGATACCCGATGATATTCTCTCCGATAAAGAAAAAGTTGTGAATCAATTGGACAGTTTTGTACCGAACGTGGGTGTACCGGGCACACCACAACCACCATTGACGAATTTTCGGAGCCCTGCGAAGAGTAATTTGAAACGAAGATTGATAGATTGCATGGACGAGGCTCCTAGTCCGAAGAGAAGCAATACGGAAGAGTCGATGAAAAAGAAACGCAATATTCAATTCGACGCTGTCACCGTGTATTATTTTCCCAGGGCACAGGGTTTCACTTGTGTACCTTCTCAGGGTGGCAGCACCCTTGGCATGAGTGCGACGCATACTCATGCAGAACGGTTCTCGTTATCGGAGCATGCTGCTGAACAGAGGCGAATTCATCGTGCTAGACTAGCTCAATTGCGCTCCGAGCGTGCTGCAAATTGCGTATCGGAAGCAGCCTCCAGCTCCGAGGATCCCAGCGACGACACGGACGAGGAACAAAGCGATAACGAAGAACTGGATATCGATAGTTATTATTTCCTGCAGCCGGTACCTACGTGGCAGAGACGAGCTTTACTCAGGGCGGCTGGAGTACGTAGAATAGATGCCGTGGAAAAGGACGAGTGCCGTGACATTAGAGCTAGCAGAGAACATTGCGGTTGCGGATGCAAAGGATATTGCGATCCAGAGAGTTGTCCTTGTAGTCGAGCTAATGTAAAGTGCCAGGTTGATAGAGCGGGTTTTCCTTGCGGATGTACCCGAGATGGTTGTGCGAATAGTTCAGGCAGGATTGAGTTCAATCCAGTACGAGTGCGAACGCATTTCATTCACACTCTCATGCGGCTGGAATTAGAAAAAAAGCAACGAGAAGAAGAGGGTACGGATCACGACGCGTCCGACAATCAAAACGGCAGAAGTCCGCTAAGAGAAATTAATTTGGGATCCGTGATGGAGAATAGGACCACGGAATCGTGTTTGAACGGTGGTGGATTTACGACGCTTCATTACGAAAATCACGACGCTAGGGACGGCGGGACGAATTGTCAGCCAGAAGTACCTGGTACTAGAGAGGATAGTCTGGATCTTTACGCGATTAGAGACGATTGCTATCCTAACGAAGACACTGTCGATGGTACGCAGGGACCTCAAAGGAAACTTCATCCTGAGTTTAGTCAAGCTTTTCAAACGTTCTCAGGCCAAACAAGTGCCGGAGTAAACTTTCAACAGCCTACTTATCAGGACTATCAACCTTACGCTAACCTTCCTTCTACATCTAGGGTGCAATTTCAGCCGCAATTCCAAACGGTGCCAGGAAATCCAGGGTTCTCACACTATGCGCCTTACGGGCAAGACGCCGGATCGATTCAGGGAAACTGCCAGGTCCATCCCGGACAACACTCATCCAGTTACGAAACTAGCTTTGCCCAGGACGAAACAACCGGGTCACAATACACGAATTTAAATTCGGTGCAGCCGATGAATACAGTGGTTCAACAAATAGGTAAACTAGAACCATTTTCAGAACTTTTGTCTGGTAGATATTCGTACTATGGTGAAATGGAACCCGCGGCTCATGCTACTTATCACGGGAATGGAACCAAGGTCGAGGTAGAAAAGAACCAAGGTAACGAACAACAATCGGAAAGTACGGAAGAGTGTGACGAAAACTTTGGGGAAATTATTAAAAAGTCAATGGTTGAGACTGTATCCGCCTAG
- Protein Sequence
- MELPSAPDRLLEAQEGSTSADLAETVSGGALTVETAATIGALTTVSSSTTSENGPTNRDDDDADSLMATTEEVHDATRRSVDNQVFIDIELCEASVKTSNDFSHGEGQLDFSDMGLKLGKDKTQSEDAGNDVEVKSSESVDEQDSSTPTPTPTPTLTPTPTSMSMSMSLSVQCTEKQTDDSKVDDSCGAEFTASSALCRKRPPSDFLPINAEIKRIGVEISENESNQVRSDVRRISPVLVSLRERTLGEISLSSNSCLFDDDVNSRCISRNNRIIDDLLTSGCRLSTNVSVDGSSQTNHGSEEISCTEPEHRVCGVATSPEGECTNGSVEEALVEPCKKLEYSGSFIDEDSCCSLSRDSPERNLSKCQEPKQCEEPVEECSCHDTMPTNSACTTPVINNKQTVETMKSSLPQLVVKIDPINMSQYFSPEQKDAKYMTVASKKKQKKNTTCKADDSNVDVRIDSKDTSQKVCSVERRNSEIGDRKTESQDHKEKKDDAAIVSDLQQTKLIKPIPRDNGMSTKKCKVLLQRITLPKTVKATTEEKPEKEETPATSVIEKLAEDEEVVFSLPLPSTEDLQPLNNLDSSETTPSSPEMLEPTTDVPEAIDTETETETGSDSSEMSTATNVRGCEDDTASDQISCQENESMCCVDINPEIISRLEPERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPVPESDSETSFLDRIPDDILSDKEKVVNQLDSFVPNVGVPGTPQPPLTNFRSPAKSNLKRRLIDCMDEAPSPKRSNTEESMKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVSEAASSSEDPSDDTDEEQSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEGTDHDASDNQNGRSPLREINLGSVMENRTTESCLNGGGFTTLHYENHDARDGGTNCQPEVPGTREDSLDLYAIRDDCYPNEDTVDGTQGPQRKLHPEFSQAFQTFSGQTSAGVNFQQPTYQDYQPYANLPSTSRVQFQPQFQTVPGNPGFSHYAPYGQDAGSIQGNCQVHPGQHSSSYETSFAQDETTGSQYTNLNSVQPMNTVVQQIGKLEPFSELLSGRYSYYGEMEPAAHATYHGNGTKVEVEKNQGNEQQSESTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00233222;
- 90% Identity
- iTF_00223182;
- 80% Identity
- -