Bpas021329.1
Basic Information
- Insect
- Bombus pascuorum
- Gene Symbol
- CSRNP3
- Assembly
- GCA_905332965.1
- Location
- HG995272.1:15892438-15926115[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.046 1e+03 -0.3 1.7 52 103 425 476 410 526 0.52 2 2 3.1e-101 7e-97 323.9 8.8 1 218 781 991 781 991 0.92
Sequence Information
- Coding Sequence
- ATGGAATTACCTTCGGCTCCGGATCGTCCTTTAGAAGCTCAAGAAGATTCTACCTCGGCTGATTTAGCGGAAACGGTTAGTGGTGGTGCATTGACTGTAGAATCAGCGCCAACGATTGGTGCGTTGACGACAGTGTCGTCGTCAACTACATCGGAAAACGGACCAACGAAGCGCGACAATGATGCCGATTCTTTGATGGCTACAACCGAAGAAATACACGATGCTACTCGTCGATCCGTCGATAACCAAGTGTTCAACAATCTAGAATTATGTGAGGCTTCGGCCAAGACCTCGAACGACTTTTCACACGGCCAAGGTCAATTAGACTTCTCCGATATGGGTCTGAAACTTGGGAAAGATAAGACGCAACCTGAAGACGCGGGTAACGATGTAGAAGTGAAATCGAGCGAATCCGTGGATGAACAAGATTGTTCGACGTCGACGCCGACGCCAACGCTAACGCCGACGCCGACGCCGACGCCGACGCTGACGTCGATGTCGATGTCGTTGTCGGTTCAGTGTACCGAGAAACAGACAGACGATTCTAAAGTGGATGATAGTTTCGGTACAGGATTTACCACCTCATCGCCGTTGTGTAGAAAAAGGTCGGCCAACGATTTTCTGCCGATCAATGCGGAGATCAAGCGGATCGGCGTTGAAATTTCGGAGAATGAATCGAATCAACTAAGAAGCGACGTGAGGAGGATCTCACCGGTGTTGGTGAGCCTCCGAGAGCGTACCCTGGGTGAGATATCCCTGTCGTCGAACTCGTGCCTGTTCGACGACGATGTCAACAGTCGATGTATCTCAAGGAACAATAGGATTATCGATGATTTATTAACGAGTGGTTGTAGGTTATCAACGAATGTAAGCGTGGACGGTTCTTCTCAAACGAATCACGGTTCCGAGGAGATAAGCTGTACCGAGCCGGAGCATAGGGTCTGCGGAGTAGCGACGTCGCCGGAAGGTGAATGTACCAACGGCAGCGTCGAGGAGGCGCTGGTAGAGCCCTGTAAAAAGCTCGAATACTCGGACTCGTTTATTGACGAGGATTCTTGTTGTTCGCTGTCGCGCGACAGCCCCGAGAGGAATCTCAGCAAGTGCCAGGAACCGAAACAGTGCGAGGAGCCTGTCGAGGAGTGCTCGTGTAACGATACTATGCCTACGAATAGTGCTTGCACAACACCGATTTTAAACAAGCAGATGATGAAAAGTTCGTTACCCCAATTAATGGTTAAGATAGATCCCATTAATATGTCGCAGTACTTCTCATCAGAACAGAAAGATGCGAAATATATGACCGTCACCTCGAAGAAGAAACAGAAGAAGAACACCGCGTGCAAGGCTGATGATAGCAACGTAGATGTAAGGATTGATTCCAAAGATACGTCGAAGAAAGTATGTTCCGTTGAAAGGCGAGATTGCGAGATCAGTGTCCAAAAGACTGAGTCACAGGACCATAAGGAGAAGAAGGACGATTCTCCTGTAGTATCCGATCTGCAACAGACCAAATTGATAAAATCAACTCCCACTATCTCTTTGAAGAAATGCAAGGTGATCTTGCAAAGGATAATATTGCCGAAAACGGTAAAAGCGGCGACGGAAGAGGAGCCGGAAAAAGAAGAAACGCCAGCCACATCGGTAATAGAGAAATTAGCAGAGGATGAGGAAGTAGTGTTTTCCTTGCCTTTACCCTCTACGGAGGATTTACAGCCGTTGAACAATTTGGATTCGTCTGAAACGACACCAAGTTCACCAGAGATGTTGGAACCTACCACGGATGTCCCAGAAGCTATTGATACAGAGACGGAAACAGAAACCGGGTCCGATAGCTCCGAAATGTCAACCACGACGAATGTACGTGGATGTGAGGATGATACCGCTTCTGATCAAATATCGTGCCAGGAGAACGAGTCCATGTGCTGCGTTGATATTAATCCGGAGATCATATCGAGGTTGGAGCCAGAGAGGCCGGAAGCTTTTACAGAAGATTCAGCGGAAAGCCTAGCGCTTGCCACTGGTGCGCGGGATGAAGTTAGATCGGATGGAAGCGATTCTGGTTTAGGAAGCGAGATACCCGGTGATCCTGGGCCTGCACCGGTTCCCGAAAGCGATTCCGAAACTTCTTTCTTGGATAGGATACCCGATGATATTCTCTCCGATAAAGAAAAAGTTGTGAATCAATTGGACAGTTTTGTACCGAATGTGGGTGTACCTGGTACACCACAACCACCATTGACGAATTTTCGGAGCCCTCCAAAGAGTAATTTAAAACGAAGATTGATAGATTGCATGGACGAGGCTCCTAGTCCAAAGAGAAGCAATACAGAAGAATCTATGAAAAAGAAACGCAATATTCAATTCGACGCTGTCACCGTGTATTATTTTCCCAGGGCACAGGGTTTCACTTGTGTGCCTTCTCAGGGTGGCAGCACCCTTGGCATGAGTGCGACGCATACTCATGCAGAACGGTTCTCGTTATCGGAGCATGCTGCTGAACAGAGGCGAATTCATCGTGCTAGACTAGCTCAATTGCGCTCCGAGCGTGCTGCAAATTGCGTATCGGAAGCAGCCTCCAGCTCCGAGGATCCGAGCGATGATACGGACGAGGAACAAAGCGATAACGAAGAACTGGATATCGATAGTTATTATTTCCTGCAGCCGGTACCTACGTGGCAGAGACGAGCTTTACTTAGGGCGGCTGGAGTACGTAGAATAGATGCTGTCGAAAAGGACGAGTGCCGTGACATTAGAGCTAGCAGAGAACATTGCGGTTGTGGGTGCAAAGGATATTGCGATCCAGAGAGTTGTCCTTGTAGTCGAGCTAATGTAAAGTGCCAGGTTGATAGAGCGGGTTTTCCTTGTGGATGTACCCGAGATGGTTGTGCGAATAGTTCAGGCAGGATTGAGTTCAATCCAGTACGAGTGCGAACGCATTTCATTCATACTCTTATGCGACTGGAGTTAGAAAAAAAGCAACGAGAAGAAGAGGGTACAGATCACGACGCGTCCGACAATCAAAACGGCAGAAGTCCTTTGAGAGAAATCAATTTGGGATCCGTGATGGAGAATAGGACCACGGAATCGTGCTTGAACGGTGGTGGATTTACGACGCTTCATTACGAAAATCACGACGCTAGGGACGGCGGGACGAATTGTCAGCCAGAAGTACCTGGTACGAGAGAGGATAGTCTGGATCTTTACGCAATTAGAGACGATTGCTATCCTAACGAAGACACTGTTGATGGTACGCAGGGACCTCAAAGGAAACTTCATCCTGAATTTAGTCAAGCTTTTCAAACGTTCTCAGGCCAAACAAGTGCCGGAGTAAACTTTCAACAGCCTACTTATCAGGACTATCAACCTTACGCTAACCTTCCTTCTACATCTAGGGTGCAATTTCAGCCGCAATTCCAAACGGTGCCAGGAAATCCAGGGTTCTCACACTATGCGCCTTATGGGCAAGACGCCGGATCAATTCAGGGAAACTGCCAGGTCCATCCCGGACAACACTCATCCAGTTACGAAACTAGCTTTGCCCAGGACGAAACAACCGGATCACAATACACGAATTTAAATTCGGTGCAGCCGATGAATACAGTGGTTCAACAAATAGGTAAACTAGAACCATTTTCAGAACTTTTGTCTGGTAGATATTCGTACTATGGTGAAATGGAGCCGGCGGCTCATGGTACTTATCACGGGAATGGAACCAAGGTCGAGGTAGAAAAGAACCAAGGTAACGAACAACAATCGGAAAGTACGGAAGAGTGTGACGAAAACTTTGGGGAAATTATTAAAAAGTCAATGGTTGAGACTGTATCCGCCTAG
- Protein Sequence
- MELPSAPDRPLEAQEDSTSADLAETVSGGALTVESAPTIGALTTVSSSTTSENGPTKRDNDADSLMATTEEIHDATRRSVDNQVFNNLELCEASAKTSNDFSHGQGQLDFSDMGLKLGKDKTQPEDAGNDVEVKSSESVDEQDCSTSTPTPTLTPTPTPTPTLTSMSMSLSVQCTEKQTDDSKVDDSFGTGFTTSSPLCRKRSANDFLPINAEIKRIGVEISENESNQLRSDVRRISPVLVSLRERTLGEISLSSNSCLFDDDVNSRCISRNNRIIDDLLTSGCRLSTNVSVDGSSQTNHGSEEISCTEPEHRVCGVATSPEGECTNGSVEEALVEPCKKLEYSDSFIDEDSCCSLSRDSPERNLSKCQEPKQCEEPVEECSCNDTMPTNSACTTPILNKQMMKSSLPQLMVKIDPINMSQYFSSEQKDAKYMTVTSKKKQKKNTACKADDSNVDVRIDSKDTSKKVCSVERRDCEISVQKTESQDHKEKKDDSPVVSDLQQTKLIKSTPTISLKKCKVILQRIILPKTVKAATEEEPEKEETPATSVIEKLAEDEEVVFSLPLPSTEDLQPLNNLDSSETTPSSPEMLEPTTDVPEAIDTETETETGSDSSEMSTTTNVRGCEDDTASDQISCQENESMCCVDINPEIISRLEPERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPVPESDSETSFLDRIPDDILSDKEKVVNQLDSFVPNVGVPGTPQPPLTNFRSPPKSNLKRRLIDCMDEAPSPKRSNTEESMKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVSEAASSSEDPSDDTDEEQSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEGTDHDASDNQNGRSPLREINLGSVMENRTTESCLNGGGFTTLHYENHDARDGGTNCQPEVPGTREDSLDLYAIRDDCYPNEDTVDGTQGPQRKLHPEFSQAFQTFSGQTSAGVNFQQPTYQDYQPYANLPSTSRVQFQPQFQTVPGNPGFSHYAPYGQDAGSIQGNCQVHPGQHSSSYETSFAQDETTGSQYTNLNSVQPMNTVVQQIGKLEPFSELLSGRYSYYGEMEPAAHGTYHGNGTKVEVEKNQGNEQQSESTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00233222;
- 90% Identity
- iTF_00223182;
- 80% Identity
- -