Bvan000790.1
Basic Information
- Insect
- Bombus vancouverensis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_011952275.1
- Location
- NW:2849296-2858082[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 1.1e+04 -11.0 7.3 145 168 377 404 369 406 0.56 2 3 0.14 1.5e+03 -1.9 1.2 96 118 471 492 435 562 0.52 3 3 3.2e-101 3.4e-97 323.9 8.8 1 218 804 1014 804 1014 0.92
Sequence Information
- Coding Sequence
- ATGGAATTGCCTTCGGCTCCAGATCGTCGTTTAGAAGCTCAAGAAGGTTCTACCTCGGCTGATTTAGCGGAAACGGTTAGTGGTGGTGCATTGACTATAGAATCAGCGAAAACGATTGGTGCGTCGACGACAGTGTCGTCGTCAACTACATCGGAGAACGGATCAACGAAGCGCGACAATGATGCCGATTCTTCGATGGCTACCGAAGAAATACGCGATGCTACTCGTCGATCCGTCGACAACCAAGTGTTCATCAATCTAGAATTATGTGAGGCTCCGGTCGAGACCTCGAACAACTTTTCACACGGCGAAGGTCAATTAGACATCTCCGGTATGGGTCTGAAACTTGGAAAAGATAAGACGCAACCTGAAGATGCGGATATCGATGTAGAAGTGAAATCGAACGAATCCGTGGATGAACAAGATTGTTCGATGTCGACGCCGACGCCGACGCCGACGCTGACGTTGACGCCGACGCTAACGCCGACGCTAACGCCGACGCTGACGCCGACGCTGACACTGACGCCGACGCCGACGCCGACGCCGACGCCAACGTCGATGTCGTTGTCGGTTCAGTGTACCGAGAAAGAGACAGACGATTCTAAAGTGGATGATAGTTACGGTGCAGGATTCACCACCTCATCGCCGTTGTGTAGAAAAAGACCGCCCAGCGATTTTTTGCCGATCAATGCGGAGATCAAGCGGATCGGCGTTGAAATTTCGGAGAATGAATCGAATCAAGTAAGAAGCGACGTGAGGAGGATCTCACCGGTGTTGGTGAGCCTCCGAGAGCGTACTCTGGGTGAGATATCCCTGTCGTCGAACTCGTGCCTGTTCGACGACGATGTCAACAGTCGATGCATCTCAAGGAACAATAGGATTATCGATGATTTATTAACGAGTGGTTGTAGGTTATCAACGAATGTAAGCGTGGACGGTTCTTTTCAAACGAATCACGGTTCCGAGGAGATAAGCTGTACCGAGTCGGAGCATAGGGTCTGCAGAGTAACGACGTCGCCGGAAGGTGAATGTACCAACGGCAGCGTCGAGGAGGCGCTGGTAGAGCCCTGTAAAAAGCTCGAATACTCGGACTCGTTTATTGATGAGGATTCTTGTTGTTCGCTGTCGCGCGACAGCCCCGAGAGAAATCTCAGCAAGTGCCAGGAACCGAAACAGTGCGAGGAGCCCATCGAGGAGTGCTCGTGTAGCGACACTATGCCTGCGAATAGTGCTTGCACAGCACCGGTTATAAACAACAAGCAGTTGATTGAAATGATGAAAAGTTCTTTACCCCAATTAGTGGTTAAGATAGATCAGATTAATGTGTCGCAGTACTTCTCACCGGAACAGAAAGATGCGAAATGTATGACCGTCGCCTCgaagaagaagcagaagaagaaCACCACGTGCAAGGCTGATGATAGCAACGTAGATGTAAGGATTGATCCCAAAGATACGTCGAAGAATGTATGTTCCGTTGAAAGGCGAAATTGCGAGGTCAGTGTCCAAAAGACTGAGTCACAGGACCATAAGGAGAAGAAGGACGATTCTCCTGCAGTATTCGATCTGCTACAGACCAAATTGATAAAATCAACTCCCATTATTTCTATGAAAGAATGCAAGGTGATCTTGCAAAGGATAACATTGCCGAAAACGGTAAAAGCGACGACGGAGGAGAAACCGGAACAAGATGAAACGCCAGCCACATCGGTAATAGAGAAATTAGCAGAGGATGAAGAAGTCGTGTTTTCCTTGCCTTTACCCTCCACGGAGGATTTACAGCCGTTGAACAATTTGGATTCGTCTGAAACGACACCAAGTTCACCGGAGATGTTGGAACCTACCACGGATGTCCCAGAAGCTATTGACACAGAGACGGAAACCGAAACCGGGTCCGATAGCTCCGAAATGTCAACCACGACCAATGTACGTGGATGTGAGGATGATACCGCTTCTGATCAAATATCGTGTCAGGAGAACGAGTCCATGTGCTGCGTTGATATTAATCCGGAGATCATATCGAGGTTGGAGCCTGAGAGGCCGGAAGCTTTTACAGAAGATTCAGCGGAAAGTCTAGCGCTTGCCACTGGTGCGCGGGACGAAGTTAGATCGGATGGAAGCGATTCTGGTTTAGGAAGCGAGATACCCGGTGATCCTGGGCCTGCACCGGTTCCCGAAAGCGATTCCGAAACTTCTTTCTTGGATAGGATACCCGATGATATTCTCTCCGATAAAGAAAAAGTTGTGAATCAATTGGACAGTTTTGTACCGAATGTGGGTGTACCGGGTACACCACAACCATCATTGACGAATTTTCGGAATCCTCCAAAGAGTAATTTAAAACGAAGATTGATGGACTGCATGGATGGGGCTCCTAGTCCGAAGAGAAGCAATACGGAAGAAACCATGAAAAAGAAACGCAATATTCAATTCGACGCTGTCACCGTGTATTATTTTCCCAGGGCACAGGGTTTCACTTGTGTACCTTCTCAGgGTGGCAGCACCCTTGGCATGAGTGCGACGCATACTCATGCAGAACGGTTCTCGTTATCGGAGCATGCTGCTGAACAGAGGCGAATTCATCGTGCTAGACTAGCTCAATTGCGCTCCGAGCGTGCTGCAAATTGCGTATCGGAAGCAGCCTCCAGCTCCGAGGATCCCAGCGATGATACGGACGAGGAACAAAGTGATAACGAAGAACTGGATATCGATAGTTATTATTTCCTGCAGCCAGTACCTACGTGGCAGAGACGAGCTTTACTTAGGGCGGCTGGAGTACGTAGAATAGATGCTGTCGAAAAGGACGAGTGCCGTGACATTAGAGCTAGCAGAGAACATTGCGGTTGCGGGTGCAAAGGATATTGCGATCCAGAGAGTTGTCCTTGTAGTCGAGCTAATGTAAAGTGCCAGGTTGATAGAGCGGGTTTTCCTTGTGGATGTACCCGAGATGGTTGTGCGAATAGTTCAGGCAGGATTGAGTTCAATCCAGTACGAGTGCGAACGCATTTCATTCACACTCTCATGCGGCTGGAGTTAGAAAAAAAGCAACGAGAAGAAGAGAGTACGGATCACGACACTTCCGACAATCAAAACGGCAGAAGTCCGTTAAGAGAAATCAATTTGGGATCCGTGATGGAGAATAGGACCACAGAATCGTGTCTGAACAGTGGTGGATTTACGACGCTTCATTACGAAAATCACGACGCTAGGGACGGCGGGACGAATTGTCAGCCAGAAGTACCTGGTACTAGAGAGGATAGTCTGGATCTTTACGCAATTAGAGACGATTGCTATCCTAACGAAGACACTGTTGATGGTACGCAGGGACCTCAAAGGAAACTTCATCCTGAGTTTAGTCAAGCTTTTCAAACGTTCTCAGGCCAAACAAGTACCGGAGTAAACTTTCAACAGCCTACTTATCAGGACTATCAACCTTACGCTAACCTTCCTTCTACATCTAGGGTGCAATTTCAGCCGCAATTTCAAACGGTGCCAGGAAATCCAGGGTTCTCACACTATGCGCCTTATGGGCAAGACGCCGGATCAATTCAGGGAAACTGCCAGGTCCATCCCGGACAACACTCATCCAGTTACGAAACTAGCTTTGCCCAGGACGAAACAACCGGATCACAATACACGAATTTAAATTCGGTGCAGCCGATGAATACAGTGGTTCAACAAATAGGTAAACTAGAACCATTTTCAGAACTTTTGTCTGGTAGATATTCGTACTATGGTGAAATGGAGCCCGCGGCGCATGGTACTTACCACGGGAATGGAACCAAGGTCGAGGTAGAAAAGAACCAAGGTAACGAACAACAATCGGAAAGTACGGAAGAGTGTGACGAAAACTTTggggaaattattaaaaagtcaATGGTTGAGACTGTATCCGCCTAG
- Protein Sequence
- MELPSAPDRRLEAQEGSTSADLAETVSGGALTIESAKTIGASTTVSSSTTSENGSTKRDNDADSSMATEEIRDATRRSVDNQVFINLELCEAPVETSNNFSHGEGQLDISGMGLKLGKDKTQPEDADIDVEVKSNESVDEQDCSMSTPTPTPTLTLTPTLTPTLTPTLTPTLTLTPTPTPTPTPTSMSLSVQCTEKETDDSKVDDSYGAGFTTSSPLCRKRPPSDFLPINAEIKRIGVEISENESNQVRSDVRRISPVLVSLRERTLGEISLSSNSCLFDDDVNSRCISRNNRIIDDLLTSGCRLSTNVSVDGSFQTNHGSEEISCTESEHRVCRVTTSPEGECTNGSVEEALVEPCKKLEYSDSFIDEDSCCSLSRDSPERNLSKCQEPKQCEEPIEECSCSDTMPANSACTAPVINNKQLIEMMKSSLPQLVVKIDQINVSQYFSPEQKDAKCMTVASKKKQKKNTTCKADDSNVDVRIDPKDTSKNVCSVERRNCEVSVQKTESQDHKEKKDDSPAVFDLLQTKLIKSTPIISMKECKVILQRITLPKTVKATTEEKPEQDETPATSVIEKLAEDEEVVFSLPLPSTEDLQPLNNLDSSETTPSSPEMLEPTTDVPEAIDTETETETGSDSSEMSTTTNVRGCEDDTASDQISCQENESMCCVDINPEIISRLEPERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPVPESDSETSFLDRIPDDILSDKEKVVNQLDSFVPNVGVPGTPQPSLTNFRNPPKSNLKRRLMDCMDGAPSPKRSNTEETMKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVSEAASSSEDPSDDTDEEQSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEESTDHDTSDNQNGRSPLREINLGSVMENRTTESCLNSGGFTTLHYENHDARDGGTNCQPEVPGTREDSLDLYAIRDDCYPNEDTVDGTQGPQRKLHPEFSQAFQTFSGQTSTGVNFQQPTYQDYQPYANLPSTSRVQFQPQFQTVPGNPGFSHYAPYGQDAGSIQGNCQVHPGQHSSSYETSFAQDETTGSQYTNLNSVQPMNTVVQQIGKLEPFSELLSGRYSYYGEMEPAAHGTYHGNGTKVEVEKNQGNEQQSESTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00233222;
- 90% Identity
- iTF_00223182;
- 80% Identity
- -