Bsel019880.1
Basic Information
- Insect
- Boloria selene
- Gene Symbol
- -
- Assembly
- GCA_905231865.2
- Location
- HG993145.1:617224-626275[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4e-10 2.3e-07 31.0 0.0 4 39 166 202 163 206 0.89 2 4 3.9e-11 2.2e-08 34.3 0.2 2 39 218 255 217 258 0.92 3 4 8.7e-15 4.9e-12 46.0 0.1 2 45 273 317 272 317 0.96 4 4 2.2e-17 1.3e-14 54.3 0.0 1 38 324 362 324 366 0.94
Sequence Information
- Coding Sequence
- ATGACCGGGACTGAAGCATTTCTAGTGAAATGCGAACCGTTATCCGATGACGAAGAAACAAGTTCGCACTTTGCAAAAAGCTATTTTCATACGCTTGCGTCAGAATATCCCATCAAATTCGAACGAATATCGGAAGATGAAAATGTGCCGTCGAATCTTCTACACCACTTGCAGCATGGATTGGAAGAGCTGGCACCCGCGCCGGCCGGCCCCGCCGCCACGCCGGTGCGGGAGCAGCTGTCGGCGCCCTACGAGACCTCGCTCGCTACCCTCGAGCCTGCGCTCGACCATGATGTGGGAACATCACTCATTAGTAGACACATGGAAATGATGAATGAAGTTGCGGACTCTTCCGAGTTCGTGCCGTTGATGATCAAAGATGAGCCCAATTCTGAAGGAGAGCAACATCACTTAAGCGGTGACGACACGAGTGACTCCAACGGACCATCGCTAGAGACGTTCAGTCGATCAAGTCCCAAAAGCTGGACCCAACAAGATATGGAAAAGGCTTTGGAGGCTCTGAAGAAACATAACATGAGTCTTACTAAGGCATCCGCAACTTATGGCATACCATCAACAACTCTATGGCAGCGCGCGCACCGACTGGGCATCGACACGCCGAAGAAAGAAGGCGCGTCGAAGTCCTGGAGCGAGGCTGACCTCAAGGGAGCCCTACACGCGCTTCGTGCTGGGGCCATATCTGCTAATAAAGCCAGCAAGGCTTATGGTATCCCGAGCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGCCTCGCCGCGCCCTTCAACGCGGCGCCGACCGCGTGGCGCCGCGCCGACCTCGAGCGCGCGCTCGCCGCCATCCGCGCCGGCGCCGCCTCCGTGCAGCGCGCCGCGCACCAGTTCGGCATACCCACCGGCACCCTTTACGGTAGGTGTAAGCGAGAAGGCATAGAACTATCTCGCTCGAACCCCACGCCATGGTCTGAAGACGCCATGGAAGAGGCCCTGGAAGCTGTCAGAATTGGCCAGATGTCTATAAACCAGGCGGCCATACATTACAACCTGCCGTACTCATCTCTGTACGGTCGGTTTAAGAGGTGCAAGTTTCAGCCAGTACAAACATTTCAAAGCCAGCCGCCTGCTGCGCAAACACCTCACGCGACGGACGCATGCTCGTGCTACGCGCCCGCGCAGTACTGCGACGTGCCCAGCTGA
- Protein Sequence
- MTGTEAFLVKCEPLSDDEETSSHFAKSYFHTLASEYPIKFERISEDENVPSNLLHHLQHGLEELAPAPAGPAATPVREQLSAPYETSLATLEPALDHDVGTSLISRHMEMMNEVADSSEFVPLMIKDEPNSEGEQHHLSGDDTSDSNGPSLETFSRSSPKSWTQQDMEKALEALKKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALAAIRAGAASVQRAAHQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMEEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKFQPVQTFQSQPPAAQTPHATDACSCYAPAQYCDVPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00159746;
- 90% Identity
- iTF_00159746; iTF_00457167; iTF_00621145; iTF_01181818;
- 80% Identity
- -