Djun011988.2
Basic Information
- Insect
- Dione juno
- Gene Symbol
- -
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000053.1:1616417-1626676[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-11 1.8e-08 34.6 0.0 4 39 167 203 164 207 0.89 2 4 1.3e-11 2.2e-08 34.3 0.2 2 39 219 256 218 259 0.92 3 4 6.7e-17 1.1e-13 51.2 0.2 2 45 274 318 273 318 0.96 4 4 2.1e-17 3.5e-14 52.9 0.0 1 38 325 363 325 367 0.94
Sequence Information
- Coding Sequence
- ATGACTGGGACAGAAGCTTTCCGAGTGAAATGCGAACCGCTGTCCGATGACGAAGATATAAGTTCTCAATTTgccaaaacttattttaataagCTTTCAACTGAGTACGTCCCCATCAAATTGGAGCACATCTCGCATGCAGATGAAAATGTTTCGACGAACCTTCTACACCACTTGcagCATGGCTTGGAGGAGCTCGCGCCTGCGCCCGCCGGCCCCGCCGCCACGCCGGTGCGGGAGCAGCTGCCCGCGCCCTACGAGGCGTCGCTGGCTACACTGGAACCGGCGTTGGATCATGATGTGGGAACATCCCTCATTAGTAGGCATTTGGAAATGATGAACGAAGTGGCGGACTCGTCCGAGTTCGTACCGTTGATGATCAAAGACGAGCCGAGTTCTGAAGGCGAACAACCCCACCTAAGCGGTGACGACACAGACTCCAACGGACCAACGCAAGAAACTTTTAGTCGCTCAAGTCCTAAAAGCTGGACGCAGCAAGACATGGAGAAAGCCTTGGAGGCGCTGAGAAAGCACAATATGAGTTTGACTAAGGCATCAGCAACCTACGGCATCCCTTCAACCACTCTGTGGCAAAGAGCACACCGACTTGGAATAGATACTCCTAAAAAGGAAGGTGCTTCGAAGTCGTGGAGCGAAGCGGACTTAAAAGGAGCTTTGCACGCGCTGCGAGCCGGTGCCATATCCGCCAATAAAGCTAGTAAGGCCTACgGCATCCCGTCCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCCGCGCCCTTCAACGCCGCGCCGACCGCCTGGCGCCGCGCCGACCTCGAGCGCGCGCTCGCCGCCATCCGCGCCGGCGCCGCCTCCGTGCAGCGCGCCGCGCGCCTCTACGGGATACCCACCGGCACGTTATACGGGAGGTGCAAGCGAGAGGGCATAGAGCTGTCCCGCTCCAACCCCACGCCGTGGTCGGAGGACGCCATGGAGGAGGCGCTGGAGGCCGTCAGGATCGGTCAGATGTCAATAAACCAGGCGGCCATCCACTTCAACCTGCCGTACTCCTCGCTGTACGGACGGTTCAAGAGGTGTAAATTTCAACCTGTTCAGTGCGTTCAGCAAGCAGAGGTGCGGGGCGGGGACGAGGAAACGGAAGCTAGCGTACAGAGCCAGCCCCGCAGTGACACTCTTACATTACGCTCCGATTAG
- Protein Sequence
- MTGTEAFRVKCEPLSDDEDISSQFAKTYFNKLSTEYVPIKLEHISHADENVSTNLLHHLQHGLEELAPAPAGPAATPVREQLPAPYEASLATLEPALDHDVGTSLISRHLEMMNEVADSSEFVPLMIKDEPSSEGEQPHLSGDDTDSNGPTQETFSRSSPKSWTQQDMEKALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALAAIRAGAASVQRAARLYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMEEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKFQPVQCVQQAEVRGGDEETEASVQSQPRSDTLTLRSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00159746;
- 90% Identity
- iTF_00213344;
- 80% Identity
- -