Dpha009952.2
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000035.1:539400-553588[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.6e-11 2.1e-08 34.2 0.0 4 39 168 204 165 208 0.89 2 4 3.7e-11 2.2e-08 34.1 0.2 2 39 220 257 219 260 0.92 3 4 2.9e-16 1.7e-13 50.5 0.2 2 45 275 319 274 319 0.96 4 4 5.9e-17 3.5e-14 52.7 0.0 1 38 326 364 326 368 0.94
Sequence Information
- Coding Sequence
- ATGACTGGGACGGAAACATTCCGAGTGAAATGCGAACCGCTATCCGATGAAGAAGAAACAAGTTCTCAATTTACaaacacttattttaataagCTCTCATCAAGCGATTACGTCCCGATCAAGTTGGAGCACATCTCGCAGCCGGACGAAAATATTTCCACAAACCTTCTGACCCACTTGcagcATGGCTTGGAGGAGCtggcgcccgcgcccgccggcCCCGCCGCCACGCCCGTGCGGGAGCAACTACCCGCGCCTTACGAAGCATCACTCGCCACACTCGAACCGGCTATTGATCATGACGTGGGAACATCTCTCATTAGCAGACACATGGAAATGATCAACGAAATGGCGGACTCATCAGAATTTGTTCCGTTGATGATCAAAGACGAGCCGAGTTCTGAAGGCGAACAACACCAGCTAAGCGGTGACGACACCGACTCCAATGGACCCTCACAGGAAACCTTCAGTCGGTCCAGCCCTAAGAGCTGGACTCAGCAGGACATGGAGAAAGCTCTGGAAGCTCTCAGGAAACACCATATGAGCTTAACTAAGGCATCAGCTACCTACGGTATCCCCTCCACTACCCTATGGCAGAGAGCTCACAGACTCGGCATAGACACGCCTAAGAAGGAGGGGGCTTCAAAGTCGTGGAGTGAAGCGGATTTGAAGGGAGCACTGCACGCTCTGCGAGCCGGCGCCATATCCGCGAATAAGGCGAGCAAGGCTTATGGCATCCCGTCCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCCGCGCCCACGGCCTGGCGCCGCGCCGACCTGCAGCGCGCGCTCGCCGCCATCCGCGCCGGCGCCGCGTCCGTGCAGCGCGCCGCGCAGCTGTACGGCATCCCCACCGGTACTCTATACGGCAGGTGTAAGCGAGAGGGCATCGAGCTGTCCCGCTCCAACCCCACGCCGTGGTCCGAGGACGCCATGGAGGAGGCGCTCGAGGCCGTCCGCATCGGTCAAATGTCAATAAACCAAGCGGCCATCCACTTCAATTTGCCGTACTCGTCTTTGTACGGGCGATTCAAAAGATGTAAATTCCAACCGCTTCAgAATCAACAACCGATGACAGCAGACGCGGAGCCCCGCGACCCCATGGACCCCGCGGCCCCGTACCAGTACGACGCGGCGGCCCCCCCGCCCCCGCAGGCGCCGCACTCgtacgcacacgcacacgcacacgcacacgcacacgcacacgcacacgtcCCATACGAGGGCTACCAATACGCGCAAATGTACTACACGCAGTGTGACGTCACCAGCTGA
- Protein Sequence
- MTGTETFRVKCEPLSDEEETSSQFTNTYFNKLSSSDYVPIKLEHISQPDENISTNLLTHLQHGLEELAPAPAGPAATPVREQLPAPYEASLATLEPAIDHDVGTSLISRHMEMINEMADSSEFVPLMIKDEPSSEGEQHQLSGDDTDSNGPSQETFSRSSPKSWTQQDMEKALEALRKHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALAAIRAGAASVQRAAQLYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMEEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKFQPLQNQQPMTADAEPRDPMDPAAPYQYDAAAPPPPQAPHSYAHAHAHAHAHAHAHVPYEGYQYAQMYYTQCDVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00159746;
- 90% Identity
- iTF_00213344;
- 80% Identity
- -