Bhec010577.2
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951806755.1
- Location
- OX638257.1:10813636-10829633[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-75 4.7e-71 240.0 23.6 1 264 143 399 143 421 0.92 2 2 2 2.5e+04 -7.6 19.2 1 48 422 468 422 498 0.72
Sequence Information
- Coding Sequence
- atgacgTTAAATATGAGCGATCGATCTGTGTTGGCCACTCCTGAAAACAGCGACGAGGAGAGTGGAGATGCTTTTACAGATGGTGATTTTGGTGACTCTGAGGAAGAAACTGTGGTAGAgcgtaatttattaaaaacagcaCATATGCCTATCAATGAAAGCATCAATTCCGAAATTAAAGTGAATAGTGATATCGATAGTGATATCAATGAAAGTGCTAATTCTGAAATTAAAGTGAACAGTGATATTGATCGTACCGATGACAGTTTAGACCAAACTAATGGTGTTCAGGAGAAATTTACTGACGAGAAGGAAGAAAATATGCATTTTAGTGACTTTACTAACGGTGACAGCCCATCGGACTTACGAAGAGATTCGCAAAGTGACGGCTCCATCGTTGGAATTCTCGGCGATCAGCATAGTCACgCAGAACAACGACTAGCGGCGCGTCGTGCTGCGCGGGCGGAGGCGCGCGAGATCCGCATGCGCGAGTTGGAACGACAGCAGCGCGAGCAAGAGGACCATGCTGATAAGGCGTATGATATGTACGAGACGGTGGGAAGGCGGACAGGCAGTCGGTTAGCCGTGTTGAGCCCCAGCGCGCTACACTCGCCGCGTCGCAGTTCAGAGGATTCTGATGATGTGCTCAGCATCAAGGATCTTAGGCATGAACTAAAAGAAGTGGAGGAGAAGTTCCGCAAAGCCATGATCCTCAACGCCCAGCTGGACAACGACAAAGCGGCGCTCGGCTACCAGCTCGAGTTGCTCAAGGACAGGATAGAAGAGCTGCAAGAGGAGTATGCGCAGTTACAGCGCGAGCACAAAGAAAAGTGTTCAACGCACGAGCGGCTGAAGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGGGCGTGGCGCGCGACGCGGTGCGCGCGCGcgacgcggcggcggcggcggccggCCGCGCCTTCGTGGAGGCCgcggccgcgcccgccgcgcccgccggcgCCGCCTGCGGCCGCGTGCCGCCGCTCGCGCTCGTCACGCACGAGAGCGAGCGCCTGCTCGACGACGCCGGCGAGGGCACGCTGGACGTGCGGCTGGAGCGGCTGGCGGGCGCGAAGGCGGCGCTGGAGGGGGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCGCGGCACAACGGCGTGGCGCACCTGCACCAGGACGTCGAGGCCGAGCTGGAGACGCTCCGCAAGTCGGCGTCGGAGGCGaaggcgcgggcggcgcgcgcggagGCGGAGGCGGCGCTgcaggcggcggcggcggcgcgcctgGAGGCGCAGGTGGCGCGGCTGCGCGCGCGGCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCAGGAGCGCCGCCGGCTGCAGCGGGAGGCGAGAGAAGCGCTAAATCGAGTGGAAGAATTAGAAACCGAAAATAGCCATCTTACAAAACGTCTAGACAAATTGAAAAATGCCAAGTCCGCGCTATTAAAGGACCTGTGA
- Protein Sequence
- MTLNMSDRSVLATPENSDEESGDAFTDGDFGDSEEETVVERNLLKTAHMPINESINSEIKVNSDIDSDINESANSEIKVNSDIDRTDDSLDQTNGVQEKFTDEKEENMHFSDFTNGDSPSDLRRDSQSDGSIVGILGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYETVGRRTGSRLAVLSPSALHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSTHERLKREHASLEREVGVARDAVRARDAAAAAAGRAFVEAAAAPAAPAGAACGRVPPLALVTHESERLLDDAGEGTLDVRLERLAGAKAALEGEVRKLKLQLNEERAARHNGVAHLHQDVEAELETLRKSASEAKARAARAEAEAALQAAAAARLEAQVARLRARQDHQDEHEEALKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723083;
- 90% Identity
- iTF_00212485;
- 80% Identity
- -