Bmor007014.1
Basic Information
- Insect
- Beris morrisii
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951812415.1
- Location
- OX638310.1:151270478-151286616[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-112 5.9e-108 361.6 34.6 1 299 30 313 30 314 0.92 2 2 0.051 1.8e+03 -1.1 4.0 220 244 342 366 317 388 0.47
Sequence Information
- Coding Sequence
- ATGGAGAGCCCCGGCGCTGTTGGAAGGCGTCGAGGAAACTCTCGCGTCAACGCCGAAGATCAGGCACTTGATCAAATTGCGAAGGAGgCGGAAGCAAGATTAGCAGCACGTCGTCAAGCACGTGCGGAAGCACGTGAAATCCGAATGCGTGAACTGGAACGGCAACAAAAGGAACAAGAGCAAAATGCTGACAGAGTATTCGATATGCAAACAGCAGCTGGAATCGATCCTCTGGCTAGGTCACGTCATACAATATCTGCAAGTTCTGCACGAGCTAGCTCGATGTCGTCAAGGCGAAGCAGTGAAGATTCCCTGGAAGAGGAAGGCCGAAGTTTACGAGATATAAGACATGAGCTTAAAgATGTAGAAGAAAGGTTTAGGAAAGCAATGATAGCTAATGCACAGTTAGACAATGAACGTGCCTCACAATCTTATCAAATTCAATTACTTAAGGACAAATTGGAAGAGATGGAAGAAAACTTTGCACAGCTACAACGTGAATACAAGGAGAAATGTCGCGATCATAACGCCTTAAAAcgaaatttcgacaaaattgaAGAAGAACTGAAATTAGTTCGAGGACAATTGGACGAACGAGATACTCTTATAGCTGAACAAGGTTTAGTTATAGTCCTGGTGGAAAATGAAGATGGCTCAGATGCCAAACGCGCTCTAGTCACTATAGATAACGCACAACTTTTAGGTTCAGTTCAAGGTTCATTAGATGTCCGACTCAAGAAATTCACAGAAGAAAAACAAGAGCTTCAGAAGGAAGTGAAAAATCTTCTACAGCAACTGTCGGATATAAAATCGCAACGAAAAGGCGGTTCTATGAACGGACCTGTGGGAAATGATGACGATTACGACGCGCAAAgagAAGCAAACAAAGTCATTTCCGAATATAAATACAAGTTACAAAAAGCAGAACAAGAAATCGCTAGTCTTCAAGCCAGCTTGGCACGATCTGAAACACAAGTTATTCGATATAAGAGTACGGCAGAAGCTGCAGAAAAAGCCGAAGCTGAATTGAAAATCGAGCGAAGAAAACTACAACGCgagaaTCGTGAAGCTATGGAACGTTTAGAAGAGCTGGAGACATCTAACAACCATCTACTGAAGCGTTTAGATAAACTAAAGAATGCTAAAAGTGCATTACTGAAAGACCTCTGA
- Protein Sequence
- MESPGAVGRRRGNSRVNAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLARSRHTISASSARASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEENFAQLQREYKEKCRDHNALKRNFDKIEEELKLVRGQLDERDTLIAEQGLVIVLVENEDGSDAKRALVTIDNAQLLGSVQGSLDVRLKKFTEEKQELQKEVKNLLQQLSDIKSQRKGGSMNGPVGNDDDYDAQREANKVISEYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00999586; iTF_01088355; iTF_00424654; iTF_00717804; iTF_00014014;
- 90% Identity
- iTF_01088355;
- 80% Identity
- -