Ddia012521.1
Basic Information
- Insect
- Dasypogon diadema
- Gene Symbol
- lrrfip2
- Assembly
- GCA_006980735.1
- Location
- jcf7180002946344:28433-36960[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-98 2.8e-94 315.5 27.3 20 299 1 266 1 267 0.91 2 2 0.042 6.4e+02 -0.8 4.0 220 244 295 319 270 341 0.46
Sequence Information
- Coding Sequence
- ATGCGTGAACTGGAACGACAACAAAAAGAGCAGGAGCAAAATGCCGATAGGGTATTTGATATGCAAACAGCGGCTGGAATCGACCCTTTATCTAGATCTCGGCTTACAATGTCAGGAAATTCCGGTCGAGGTACGTCAATGTCTTCAAGAAGAAGTAGTGAAGATTCCCTCGAAGAAGAAGGCAGAAGCTTACGTGATATTAGACATGAACTCAAGGATGTTGAAGAGCGGTTTAGGAAGGCAATGGTAGCAAATGCACAATTAGATAATGAAAGAGCTTCACAATCGTACCAAATTCAACTACTTAAGGATAAACTGGAAGAGATGGAAGAATCTCATGCTCAGCTGCAGAGGGAATACAAAGAAAAATGTCGTGATCATAATGCTTTAAAACGAAATTATGATAAACTAGAAGAAGAATTAAAATTAGTTCGAGGACAATTAGATGAAAGGGATACTCTAATATCTGAACAGGGTTTAGTTATAGTATTGGTAGAAAATGAAGATGGCTCTGATGCCAGACGCGCTCTAGTCAGTATGGAGAACGCACAACTATTAGGTTCTGTTCAAGGTTCATTAGATGTACGACTTAAGAAATTCACTGAGGAAAAACAGCAACTGCAAAAAGAAGTCCAAAGTCTTCAACAGCAAATAAGTGAAATCAAGTCGCAAGGACGACGTGGAGGATGTCTTAATGGTCCTTTAGGAGCTGAAGATGATTATGAAGCCCAAAGAGAAGCAAATAAACTTATAGCGGATTATAAGTATAAGCTTCAAAAAGCAGAGCAAGAAATAGCTAGTCTGCAAGCCAGCTTAGCGAGATCTGAAACGCAAGTTATACGATATAAAAGTACTGCAGAAGCTGCAGAGAAGGCTGAGGCTGAATTAAAAATAGAAAGAAGAAAACTTCAGCGTGAGAATCGTGAAGCTATGGAACGTTTAGAAGAGCTAGAGACAACCAATAATCATCTATTAAAACGCTTAGATAAACTAAAGAACGCGAAAAGTGCATTACTTAAGGACCTCTGA
- Protein Sequence
- MRELERQQKEQEQNADRVFDMQTAAGIDPLSRSRLTMSGNSGRGTSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMVANAQLDNERASQSYQIQLLKDKLEEMEESHAQLQREYKEKCRDHNALKRNYDKLEEELKLVRGQLDERDTLISEQGLVIVLVENEDGSDARRALVSMENAQLLGSVQGSLDVRLKKFTEEKQQLQKEVQSLQQQISEIKSQGRRGGCLNGPLGAEDDYEAQREANKLIADYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETTNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00203545;
- 90% Identity
- iTF_00717804;
- 80% Identity
- -