Aorb000441.1
Basic Information
- Insect
- Acrocera orbiculus
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_947359355.1
- Location
- OX375757.1:6459171-6463585[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-111 2.2e-107 358.7 33.9 1 299 65 349 65 350 0.91 2 2 0.084 1.4e+03 -1.8 4.3 225 243 383 401 356 424 0.42
Sequence Information
- Coding Sequence
- ATGGAAATCGATTTAAATGAACAGTTTATGAATAATAATAATATTAACAAAGAAATATCTTTTAAAAGTCAAACTTCTTTAAATGAGGACTCAATTGATATTATCAGAGATTGTAGTGAAATTGAAAATAATGATTTTGATAGTGACCAAGATGAATTTGTTATTGAATTTTTGGATAAAGTCAATAGTTTTGCTGAAGCTAGGCTCGCAGCTCGCCGTCAAGCACGTGCAGAAGCTCGAGAAATACGAATGCGTGAGCTGGAACGCCAACAAAAAGAATTAGAACAAAATGCTGATCGAGTTTTTGATATGCAAACAGCTGCTGGAATTGATTCTTTATCTAGATCAAGACTTCCAATATCAACTAGTTCAATACGTGGTAATTCAATGTCTTCAAGAAGAAGTAGTGAAGATTCTCTGGAGGAAGAAGGAAGAAGTTTACGTGATATTCGACATGAACTTAAGGATGTCGAAGAACGATTTAGGAAAGCAATGATAGCTAATGCACAATTAGATAATGAAAGGGCGTCTCAGTCTTATCAAATTCAATTACTTAAAGATAAATTAGAAGAAATGGAAGAATCATATGCTCAACTTCAACGTGAATATAAAGAAAAAAGTCGTGATTATAACGCTTTAAGAAGAAATTTAGATAAATTAGAAGATGAACTTAAATTAGTTCGAGGACAATTAGAAGAAAGAGATACATTAATAACTGAGCAAGGCTTAGTTATAGTTGTTGTAGAAAATGATGATGGCTCTGATGCCAGACGTGCTCTAGTCAGTATGGAAAATGCACAAATGTTAGGTTCAGTACAAGGATCTTTGGATGTACGGCTTAAAAAATTTACAGAAGAAAAACATCAACTTCAAAAAGAAGTTCAAACCCTTCAACAACAATTATCTGATATTAAAATGCAAGGAAGAAAAGGTGGTTCCATGAATGGCCCAATGTCATATGATGATGATTATGATGCACAGAGGGAAGCAAATAAAGCTTTATCAGATTATAAGTATAAATTACAAAAGGCAGAACAAGAAATTGCAAGCCTTCAAGCATGTTTAGCACGATCAGAAACACAAGTAATTCGTTATAAAAGTACTGCAGAAGCTGCTGAAAAAGCTGAAGCAGAACTGAAAATTGAACGAAGGAAATTACAACGTGAGaatcgagaggcaacagaaagacttgaagagttggaaactgctaataatcatttattgaaacgtttagataagcttaaaaatgctaaaagTGCTTTACTCAAAGATCTTTGA
- Protein Sequence
- MEIDLNEQFMNNNNINKEISFKSQTSLNEDSIDIIRDCSEIENNDFDSDQDEFVIEFLDKVNSFAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDMQTAAGIDSLSRSRLPISTSSIRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESYAQLQREYKEKSRDYNALRRNLDKLEDELKLVRGQLEERDTLITEQGLVIVVVENDDGSDARRALVSMENAQMLGSVQGSLDVRLKKFTEEKHQLQKEVQTLQQQLSDIKMQGRKGGSMNGPMSYDDDYDAQREANKALSDYKYKLQKAEQEIASLQACLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREATERLEELETANNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00203545;
- 90% Identity
- -
- 80% Identity
- -