Bbay016843.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bellardia bayeri
Gene Symbol
lrrfip2
Assembly
GCA_950370525.1
Location
OX493266.1:49767897-49778200[-]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2 3.3e+04 -16.5 26.7 44 164 42 181 23 188 0.57
2 5 0.6 9.8e+03 -3.6 6.1 20 97 175 258 170 260 0.41
3 5 1.1 1.7e+04 -4.5 5.2 29 86 252 321 238 335 0.45
4 5 9.3e-117 1.5e-112 376.6 26.1 1 299 357 653 357 654 0.94
5 5 0.11 1.9e+03 -1.3 3.5 135 158 688 711 657 728 0.47

Sequence Information

Coding Sequence
ATGTCAGTGGAACAAAAATTAACTGATAAAAATGCTGTGACTACAGCAACAACCACAAATTCgagtttaacaaaaactaataaaaagaacaataacaacaacaaaagcagcAATAGTAGtaagaaattcattaaaaaagcaTTGAAAAcatctaaaactaaaaaaactactaatgtcaacaacaacagcaaaaatacgtataacaaaaacagcaacaacagcaaaagcaCTAGTAAcagtagcagcaacaacaatgttgAAGTGGCAGATGATGAAATCATCGAGGAGTTGTTTGATTTTAGCGATACTGATTTAAAAGAACTTGACGATACAGAGAACAACGAAGAAattagcaaaaacaacaacactaacTCTACTACTACTAACGAgcagttaaataaaattactaaaactgAAGAATTACAAGAAAAGGATGAAGTTGACAAAGAGTCAGAGGTGCAATTGCAAAGTATaataaatgataataataatattaaccaTAATCATAATAACGAAGTGAAAGTCGAAGAAAGACAACAACAGGTGGGAGAATTATTATCGTCGCCCATTGATAAGATTGATAAACAAAACGAAGAAGAACAACAAGAAGACAATGATTTAGTCACGACAATGACACTATCAACAGCGGCGATGTACGCGGCTGCGGCGACTGCAAATATTACTAGTGAAGAAGGAAATAAAGATAATAACGAAATTGATAAAAAGCAACAACTACCCGAGTCTCccaaagaagaagaagaagagaACGAAGAAAAAGAACCCAATGAAAATACTAAATTGTTGAATAAAGACATTAGTATTACCGTGCAAATCACCAATAGTTCTATTGTTGACAAACAGCCTGACAACATAATGTCAACATCTTCAGATACAAAGTCTAAGCAAACAACTGATGATACTCCAGACTCGTCTGTGGGTGCAAATAAAGAAAGTAGTTACAATGAACATGATGATAGCAATGATTTAAATGATGATGCCGCTGATGATGAGTATGCCGAACCGTATGATGAACTGCTAGTTCAATTCCTTGGTGAAGCCAATCAGATTGCTGAGGCTAGACTAGCTGCCAGAAGGCATGCCCGAGCGGAAGCTCGAGAGATACGTATGCGAGAATTGGAACGGCAACAAAAAGAACAAGAATCTAATGCAGATCGTGTATTCGATATGCATTCAACCGTTACAGGCATAACACCACTGTCTCACATGCGTCTGGGTTTGGGTAATTCGCCAGTCACTGGCTTACTAAACTCTACGCGAGGCAATTCAATGTCATCGAGACGCAGTAGTGAAGATTCACTGGAAGATGAAGGCCGCAGTTTAAGGGATATACGTCATGAGTTAAAGGATGTTGAAGAACGATTTCGTAAGGCTATGATAGCAAACGCTCAGTTGGATAATGATCGTGCCTCACAAACCTATCAAATTCAGTTGCTTAAAGACAAACTGGAAGATATGGAAGAATCGTTTTCACAATTACAGCGTGAGTGTAAGGAAAAGACACGGGATTGTAATGCCTTGAAGCGATCGTTGGATAAACTGAGTGAAGAGCTTAAACTGGTACAGGGTCAGCTAAATGAGCGTGATACACTGATAGCAGAACAAGGCTTAGTTATTGTGGCAATTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCAGCGTTGAAAATGCACAATTATTGGGTTCGGTACAAGGATCATTAGATGTTCGACTTAAGAAATTTAGCGAGGAGAAACAACAACTACAGGCCGAAGTCCAGCAGTTGCAGGAACAATTAGAAACCTATAAAAGTCAGGGCAAAGGACGAGGTAAAGGCAATTCTTCTAATGGTCCCTTAGGTTCAGACGATGATGATTATGAAGCTCAAAGAGAAGCTAATAAAATCATCTCggattacaaatataaattacaaaaagctGAACAGGAAATTGCTAGTCTACAATCGAGTTTAGCACGTTCCGAGACACAAGTTATACGATATAAAAGTACAGCTGAGGCTGCAGAAAAAGCTGAGACAGAACTTAAAATCGAAAGGAGGAAACTACAAAGAgagAATCGCGAAACAATGGAAAAACTCGAAGAGTTAGAAACATCAAATAATCATCTTCTTAAACGTCTGGATAAATTAAAGAATGCCAAAAGTGCTTTGCTTAAAGATCTCTGA
Protein Sequence
MSVEQKLTDKNAVTTATTTNSSLTKTNKKNNNNNKSSNSSKKFIKKALKTSKTKKTTNVNNNSKNTYNKNSNNSKSTSNSSSNNNVEVADDEIIEELFDFSDTDLKELDDTENNEEISKNNNTNSTTTNEQLNKITKTEELQEKDEVDKESEVQLQSIINDNNNINHNHNNEVKVEERQQQVGELLSSPIDKIDKQNEEEQQEDNDLVTTMTLSTAAMYAAAATANITSEEGNKDNNEIDKKQQLPESPKEEEEENEEKEPNENTKLLNKDISITVQITNSSIVDKQPDNIMSTSSDTKSKQTTDDTPDSSVGANKESSYNEHDDSNDLNDDAADDEYAEPYDELLVQFLGEANQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLGNSPVTGLLNSTRGNSMSSRRSSEDSLEDEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESFSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLQAEVQQLQEQLETYKSQGKGRGKGNSSNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAETELKIERRKLQRENRETMEKLEELETSNNHLLKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00258875; iTF_00045344; iTF_00259764;
90% Identity
-
80% Identity
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