Agra010663.1
Basic Information
- Insect
- Aldrichina grahami
- Gene Symbol
- lrrfip2
- Assembly
- None
- Location
- Contig99:346480-361060[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1 1.3e+04 -16.7 32.6 31 173 33 178 21 227 0.65 2 4 1 1.3e+04 -5.6 6.8 28 65 240 278 221 328 0.45 3 4 4.4e-117 5.6e-113 376.7 26.6 1 299 353 649 353 650 0.93 4 4 0.058 7.4e+02 -1.3 3.7 220 245 678 703 653 724 0.47
Sequence Information
- Coding Sequence
- ATGTCAGTGGAACAAAAATTAACTGATAAAAATGTTGTGACTACAGCAACAACCGCAAATTCGAGTTTAACAAAAACTAATAAAAAGAACAATAACAACAACAATAGTAGTAAGAAATTCATTAAAAAAGCATTGAAAACATCAAAAACTAAAAAAAATACAAACACTTCTAATGTCAACAACAACAGCAGCAGCAAAAAAACGAATAACAAAAACAGCACTAGTAGCAGCAACAACAACAATGTTGAAGTGGCAAACGATGAAATCATCGAGGAGTTGTTTGATTTTAGCGATACAGATTTAAAAGAACTCGACGATTCGGAAACTAAAGAAGAAATTAGCGAAAATAACAACAACGAAAACTCTGCTACCAGTATCGAGCTGATAAATAAAGATATTGATGAATTAAAGGAAGAAGATGAAGTTGACAAAAAGACAGAGGTGCAATTGCAAGATATAGAAAATGATAATAACAACAATAATAATCATAATAACGAAGTGAAAGACGAAGAAAGACAACTACAACAACAACAGGTGGGAGAATCATTATCGTCGTCTATTGATAACATTGATAAACAAAACGAAGAAGAACAACAGCAAGACAATGAATTAGGCACGATAATGGCACTACCAACAGCGGCGACTGCAAATATTATTAGCGAAGAAGGAAATAAAGATAATAACAAAATTGATAAAAAACAACCAGAGTCTTCCCAAGAAGAAGAACATGAGAACGAAGAAAAAGAATCCAATGAGAATGCCTTGTTAAATAAAGACACTAGCAGCATTCCCGTGCAAATCACCAATAGTTCTATTGTTGACGAACTGCCACTGACTTCGACTGACAACAATGACAACAAAATGTCAACATCTTCAGACACAAAGTCTAAGCAAACAACTGACGATACTCCAGTATCGTCTTTGGTTGCAAATAAAGAAAGTAGTTACAATGAGCATGATGATAACAATGATTTAAATGACGATGGCGTTGATGATGAGTATGCCGAACCGTATGATGAACTACTAGTGCAATTCCTTGATGAAGCCAATCAGATTGCTGAGGCTAGATTAGCTGCCAGAAGGCATGCCCGAGCGGAAGCTCGTGAGATACGTATGCGGGAATTGGAACGGCAGCAAAAAGAACAAGAATCTAATGCAGATCGTGTATTTGATATGCATTCAACCGTTACAGGCATAACACCACTGTCACACATGCGTCTGGGTTTGGGTAGTTCGCCAGTTACTGGCTTACTAAACTCTACGCGAGGCAATTCAATGTCGTCGAGACGTAGTAGTGAAGATTCACTGGAAGAGGAAGGCCGCAGTTTAAGAGATATACGTCATGAGTTAAAGGATGTCGAAGAACGATTTCGTAAGGCTATGATAGCGAACGCTCAGTTGGATAATGATCGCGCCTCACAAACCTATCAGATACAGTTGCTTAAAGACAAACTGGAAGATATGGAAGAATCGTATTCACAATTACAGCGTGAGTGTAAGGAGAAAACACGCGATTGTAATGCCTTGAAGCGATCGTTGGACAAACTGAGTGAAGAGCTTAAACTGGTACAGGGTCAGCTGAATGAGCGTGACACACTGATAGCAGAACAAGGCTTAGTTATTGTGGCAATTGAAAATGAGGATGGCACTGATGCCAAGCGTGCTCTAGTCAGCGTTGAAAATGCACAATTATTGGGTTCGGTACAAGGATCATTAGATGTTCGACTTAAGAAATTTAGCGAGGAGAAACAACAACTGCAGGCCGAAGTTCAGCAGTTGCAGGAACAATTAGAAACCTATAAAAGTCAGGGCAAAGGTCGAGGTAAAGGCAATTCTTCAAATGGTCCCTTAGGTTCAGACGATGATGATTATGAAGCTCAAAGGGAAGCTAATAAAATCATATCGGATTACAAATATAAATTACAAAAAGCTGAACAGGAAATTGCTAGTCTACAATCGAGTTTGGCACGTTCCGAGACACAAGTTATACGCTATAAAAGTACAGCAGAGGCGGCTGAAAAAGCAGAGGCAGAACTTAAAATCGAAAGGAGGAAACTACAAAGAGAGAATCGCGAAACAATGGAAAAACTCGAAGAGTTAGAAACATCAAATAATCATCTTCTTAAACGTCTGGACAAATTAAAGAATGCCAAAAGTGCTTTGCTCAAAGATCTCTGA
- Protein Sequence
- MSVEQKLTDKNVVTTATTANSSLTKTNKKNNNNNNSSKKFIKKALKTSKTKKNTNTSNVNNNSSSKKTNNKNSTSSSNNNNVEVANDEIIEELFDFSDTDLKELDDSETKEEISENNNNENSATSIELINKDIDELKEEDEVDKKTEVQLQDIENDNNNNNNHNNEVKDEERQLQQQQVGESLSSSIDNIDKQNEEEQQQDNELGTIMALPTAATANIISEEGNKDNNKIDKKQPESSQEEEHENEEKESNENALLNKDTSSIPVQITNSSIVDELPLTSTDNNDNKMSTSSDTKSKQTTDDTPVSSLVANKESSYNEHDDNNDLNDDGVDDEYAEPYDELLVQFLDEANQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLGSSPVTGLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLQAEVQQLQEQLETYKSQGKGRGKGNSSNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENRETMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199874;
- 90% Identity
- iTF_00258875;
- 80% Identity
- -