Bmin011760.1
Basic Information
- Insect
- Bactrocera minax
- Gene Symbol
- -
- Assembly
- None
- Location
- JAPVRH010006949.1:20309-29877[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 4.3 3.3e+02 2.3 0.0 3 23 264 285 263 285 0.93 2 8 0.0054 0.42 11.5 0.2 3 20 1144 1161 1142 1165 0.93 3 8 8.6e-06 0.00066 20.3 2.7 1 23 1201 1223 1201 1223 0.98 4 8 0.003 0.23 12.3 4.3 1 21 1280 1300 1280 1301 0.94 5 8 0.00037 0.028 15.1 0.3 2 23 1308 1329 1307 1329 0.97 6 8 0.00081 0.062 14.1 2.6 1 23 1335 1357 1335 1357 0.99 7 8 0.067 5.2 8.0 1.2 1 23 1364 1387 1364 1387 0.95 8 8 0.0033 0.25 12.1 0.6 1 23 1396 1418 1396 1418 0.98
Sequence Information
- Coding Sequence
- ATGAACGAAGGAGTTATCTCCAGCTACGAGCATTTATTTGGTGGTTCTGGTTTGCCGTCTGATCTAGCTACAGAAATGGCAGCGGTCACTTCGATTCACGCAGCCATCGGAACGGATTACCACAAAGAAATACTTCCACAGCAATCACATCATCAACATTCACGGTCTTTTCATCATCCGTCGacgtacaatattttaattggtacTACAGGTGACGGCACAACACAAAATGTAGTTCCCGCACAAATGGGTTTtacttgtaataataataataataataataatagtacaACATATATTGGTAGTAACACTGCTTTTACACAAATTCCATTCGTTCAAATTCATACAACGGATGTACAGCCACAGAGTGCGTTTAATAGTACCCGATTTAGAAGAAATGTTACCAATAATAAtcaagaagaaataaaagctGAACCAATAAAGTCGGAAAATTCTGAAAGTGCCAAAGAACGAATAAATGGAACCCCCACACCACCAGTACCTGTGCAACAGAGAAGTGAAAGCCAAACTTCTAAAAACTTTAATCAAAATGAGAAAGCAGTTTATTCGGATTTAGAAACCACCAGTGGAATTTCGGAAGAAGCAAGTGAACAAAACACAGAACCATGCACGAAAGGGGGAACATCTTTTACTTTTccagatatttataaatgtcaGCATTGTGCTTTTATAAGCTTGACCGAAAGGTGTTTGCAACTTCACCTCGATTCCAGATTTCAACGACACTCCCGCGTATGTGAAAATGCCATTAGTCGAACGAAAATACTATGTCCAGgttgtgaaaatgttttctacGCTTACTCGGTTGTAGAGATTCATTTACGAGAAGATCATTTAATGTCCGAACAAGATATAATAGAACTTATGCAGACTATTAAGAAGAATAACCAACCCTCTGAACAATCCGACACGGCTAGCAACGTAAAAGGCTCTGATATAGAAGTTTCGAGTGACACTTCAATTAAGGGAACACAAAGAAGAAGTCGgatatatttgaagaatgtTGAATGTTTGCGGGAACCGAATAGAGATCCGATCGAACAACAAGATAATCTAATTAATGATAgtctttttcattttgaaaatgatgAGTGCAATACATTAGAAAACATTGGCAGCATTAGCATGGAGGAGCAGGATATTATAGGCATGCTCACTAACAGTGAATcattatttcacaacaaaagcgacaataatattgataatattgTTAATGAAACTATTGCGCCAaacttagaaataaataagttagcAAATCCacctaaacaaaaaatttccattaagaGTGTTGATGTCCTACGAGAACCAGCTCTGGTGCGACGTGATTATGAGATGCAATCTTTTGGTGATTTCATTAACGTCTgtaatgatttaaatttacatactcctaacaacagcaacaacaacgaaaataacTGTGATAACAACCATAATGGAATAAATGACACGGATGGGCAATACAGTTATTCCGTGGCTGCGAATAGAGAACCACTCGATGGTAACAATGACGATGCTGGTATAACAGAATTcacaaatgaatttgaaaaaccaAGAAGacctaaaatttatataaaaaacgtTGATATACTTAAAGAACCAATGACATTTTCGAATAATGTCAATGCGCCATCTATAACAGAGTCTACAAACAATgtaatgaatttcaattttatgcaaCCAACAATACCGCAAACTGTGAGTTCTTACCTAGATACTGTTGATAGCTTGAACGCAACAGTACCGCCTTTTAATAGTGGAATGTCACAGCTCCCGCTTGGTACCATATCAGATCAATATCTCTTCGATAGTGGAGGTGGGAACTTTTTAGTAAACGGTTCCACTGCTATGTCAGATAACTACACTACTTACGGCAATGAGCAAACTACAGAAAACTTATTAATGGATTCTAATCGGTTTACTGATACGATAACACCAATGACAACTGGACCTACACCACCACCTCCTACTATGAGTACAGCGGTAAGTAATACTAGCAATTGCACGATAGAAGCTCCGCCTACACAAAACGCTTTTGCcattacaaatgtacaaaagcagaaaatttttataaaaaatgtcgaTATTCTGAAAGAACCACAGTTTCAAGAGCCTCGTGGTTTGTTACATTTGCGCACCGTCGACGAATTAAATCTAATGAACAGAAAAGAAGTTGAAAACTTAATCGCACCGAATTTGGAGGGGAACCAAAGTAATCTAGTTGAAGAGGAACTGAGTGATAACTTTGAGCGATTAAGCAATGCAAATGGAGAGACATTATCGACCATTGAAAACTGCAATGCCAACAATCTAATTGAAGCGATATCATATGGTTGTGAAGGATTTAAATTGAATgagttttcaacacaaaatGGTTGGCATGACGACTATGATTTGGGTGACGATATTAGGGAAATCATAACTAGTACTATGGCGCCAAATTTGCCCTCAGCTCAGAATACAATACATGATTTGGATACACCACAAATATCATTGATATCGATACCAGATATGGAAGAGCTCAACGGTGCAAGTACTGAAGTTAATGCCAATTCAGAGTCAGTAACAAACGGGGACTCTACAATGACTTCGGGTgtagcacaacaacaattaagtaCAAATTTCACGTTTGAATGTGAGATCCCCACCgcagataataataatgctgAAGAACCAGCTTGTTGCACTGAGGATTTAGTCAACTCCACTGCTAACTGTAATGAGGTTATGTCGGAAACTCAAACAGAACCTGTGTCGATTGATACAGTTGTATTAGAAAGCGCAGAAGTACTAAAACAAGAGCTCTTGAATCAAACCATCCCTGGAGAACACATCGATCCGGCGccttcacaaaaaaataagacaAACAACTTTGATGACATTCCACCGCTCACACCAATGACTTCAGctacatatacaataaatactaACTTAAATACCTCAACATCAATTGCAGCTCCAACTGGTTTACCAGTGCCGCCACTTGTACCAATGTTACCACCAAAAACTATAACACTAACTAACGTTACCACGCCTGCAAATTCAACGGAACGTGGACGTATTTATGTAGCGAATAATCTAATGCAAGCACCTAACGCAGCGCCAATTTCGCAAACACCAAAAACGCTAACACCAACGGCTAATTCTAACAACACGAAGAGCTTAGATAAACAGCAGCACAAAACACCAATTGCTGTCTCTGTAATGGGTGGCACTTCGGTGCGTGGCCGACCGTTTGGTTCGAATCGTACTTGCATAACAAAGTTTCGCAAGCAGCTCCTTAACGAAAACGGAGCAGGCGTTTACCTCAAGTGCACAGTCTCGGGTTGTGCATTCCGATTTAAGAAGTCTGTCACACTAGATTACCACATAAAGTGCCATAATAGtgAGTCTCCGCTTCAGTCAATGGCATGTCCAGAATGTAAAGCACCGTTCACCAACTGGAATTCGTTGCATACACACCTCTGGCGAGCGCATAAAATCGACATGGAGCTATATAGCTGTGAATTGTGCAGCTTCAAGACACCCATATACTCACGTTTACTTAACACACATTCCAAAATTCATTATGACGAACGAAACTACAAGTGCGATCAGTGCGagaaagctttcaaaaatacaaagcaaTTGAAAAATCATCGTCGTTGGCACCGCAACCGTACCACATCCACAAAATCTTCACCAGTGAGGCGAAAAATCTCAAATAAGGCATTTGTaacaatttctgaaaataGCGAATCAGCGCTGCTACCGCCAACAGCATCTAGCATAAGCACAACTGATGCGACACAAGTACCTGTAACCGGAGTGCGTAATTTTCATCGATGCAAGGACTGCGAAGCCGTTTTTTCACATCAGAAAACATTACGTGAGCATCTGTGCAAGAACGCCGACGCAGCAGTACAGTGCGATGTGTGCGATCGGGTACTGACTTCACGCTCCTCCATCAAGTTGCATATGCAATCGCACGAGCCATCGCGACGTTTTAAATGTGACGACTGCGATTATTCTGCCAGTGATCACAATGCTTTTCGGCGACATAAAATGACACACGACAACAATGCGAAGATGTATGCTTGTGTTCACTGCGATTACAAGTCAATACAAAGCGTAGCCTATCAGAAACATGTTCAACAAAAACACCCACAAGTGGCCGATTCTATAGTTTATAAGTGCAAAATATGCCCATTTGTCACCATCAATAAGAGTTTATTCGACATACATCAAGTTAAACATGAAAACAAGAATGGCAACAATGAAGCAACTGCTGCAATTCCTATGGAAAATGTAGGCTGcatagaaaaagcaaaaacggtaaaaacaaagataaaaGTGAAGAGTCACTTATTACTGACCACTTCGACCGATTCAACAATGGAATTAAATGAGTTATGTTTTGAAACGGTAACTATGCCGTTATAG
- Protein Sequence
- MNEGVISSYEHLFGGSGLPSDLATEMAAVTSIHAAIGTDYHKEILPQQSHHQHSRSFHHPSTYNILIGTTGDGTTQNVVPAQMGFTCNNNNNNNNSTTYIGSNTAFTQIPFVQIHTTDVQPQSAFNSTRFRRNVTNNNQEEIKAEPIKSENSESAKERINGTPTPPVPVQQRSESQTSKNFNQNEKAVYSDLETTSGISEEASEQNTEPCTKGGTSFTFPDIYKCQHCAFISLTERCLQLHLDSRFQRHSRVCENAISRTKILCPGCENVFYAYSVVEIHLREDHLMSEQDIIELMQTIKKNNQPSEQSDTASNVKGSDIEVSSDTSIKGTQRRSRIYLKNVECLREPNRDPIEQQDNLINDSLFHFENDECNTLENIGSISMEEQDIIGMLTNSESLFHNKSDNNIDNIVNETIAPNLEINKLANPPKQKISIKSVDVLREPALVRRDYEMQSFGDFINVCNDLNLHTPNNSNNNENNCDNNHNGINDTDGQYSYSVAANREPLDGNNDDAGITEFTNEFEKPRRPKIYIKNVDILKEPMTFSNNVNAPSITESTNNVMNFNFMQPTIPQTVSSYLDTVDSLNATVPPFNSGMSQLPLGTISDQYLFDSGGGNFLVNGSTAMSDNYTTYGNEQTTENLLMDSNRFTDTITPMTTGPTPPPPTMSTAVSNTSNCTIEAPPTQNAFAITNVQKQKIFIKNVDILKEPQFQEPRGLLHLRTVDELNLMNRKEVENLIAPNLEGNQSNLVEEELSDNFERLSNANGETLSTIENCNANNLIEAISYGCEGFKLNEFSTQNGWHDDYDLGDDIREIITSTMAPNLPSAQNTIHDLDTPQISLISIPDMEELNGASTEVNANSESVTNGDSTMTSGVAQQQLSTNFTFECEIPTADNNNAEEPACCTEDLVNSTANCNEVMSETQTEPVSIDTVVLESAEVLKQELLNQTIPGEHIDPAPSQKNKTNNFDDIPPLTPMTSATYTINTNLNTSTSIAAPTGLPVPPLVPMLPPKTITLTNVTTPANSTERGRIYVANNLMQAPNAAPISQTPKTLTPTANSNNTKSLDKQQHKTPIAVSVMGGTSVRGRPFGSNRTCITKFRKQLLNENGAGVYLKCTVSGCAFRFKKSVTLDYHIKCHNSESPLQSMACPECKAPFTNWNSLHTHLWRAHKIDMELYSCELCSFKTPIYSRLLNTHSKIHYDERNYKCDQCEKAFKNTKQLKNHRRWHRNRTTSTKSSPVRRKISNKAFVTISENSESALLPPTASSISTTDATQVPVTGVRNFHRCKDCEAVFSHQKTLREHLCKNADAAVQCDVCDRVLTSRSSIKLHMQSHEPSRRFKCDDCDYSASDHNAFRRHKMTHDNNAKMYACVHCDYKSIQSVAYQKHVQQKHPQVADSIVYKCKICPFVTINKSLFDIHQVKHENKNGNNEATAAIPMENVGCIEKAKTVKTKIKVKSHLLLTTSTDSTMELNELCFETVTMPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00193895; iTF_00190283; iTF_00190960; iTF_00193138; iTF_00191669; iTF_01564125; iTF_01563263;
- 90% Identity
- -
- 80% Identity
- -