Blat005687.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bactrocera latifrons
Gene Symbol
-
Assembly
GCA_001853355.1
Location
NW:300915-307946[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 5.4 3e+02 1.7 0.5 1 21 197 217 197 218 0.85
2 10 3.4 1.9e+02 2.3 0.1 2 23 237 259 236 259 0.92
3 10 1.2 67 3.7 2.6 2 21 1085 1106 1084 1108 0.93
4 10 0.0046 0.26 11.4 0.4 3 20 1119 1136 1117 1140 0.93
5 10 6.6e-06 0.00037 20.3 2.7 1 23 1176 1198 1176 1198 0.98
6 10 0.00045 0.025 14.5 3.1 1 21 1255 1275 1255 1276 0.95
7 10 0.00011 0.0061 16.5 0.3 2 23 1283 1304 1282 1304 0.97
8 10 0.0012 0.066 13.2 3.0 1 23 1310 1332 1310 1332 0.99
9 10 0.052 2.9 8.0 1.2 1 23 1339 1362 1339 1362 0.95
10 10 0.04 2.2 8.4 0.9 1 23 1371 1393 1371 1393 0.97

Sequence Information

Coding Sequence
ATGGCAGCGGCCACTTCGATTCACGCAACTATCGGAACGGATTACCATAAAGAGATAACACCACAGCAATCACAAAATCAACATTCACGGTCTTTCCATCATCCGTCgacatataataatttaattggtGCTATGTGTGACGGTACTACGCAAAGTATAGTTCCCGCACAAATGAGCTTtacttgtaataataataacagtgcAACATATATTGGTAATGGTGCGAGTAATACTGCCTTTACACAAATACCATTCGTTCAAATTCACACGACGGATGTGCAACCACAGAGTGCATTTAATAGTACAAGATTTAGAAGAAATCTCACTAATAAtaatcaagaagaaataaaagctGAACCAATTAAATCTGAAAATTCTGAAAGTGCCAAAGAACGAATAAATGGAACTCCCACACCACCAGTACCTGTGCAGCAAAGAAGTGACAGCCaaacttctaaaaattttactcaaaatgaGAAAGTAATTTATTCGCATTTAGAAACTACTCGTGGACATTCGGATGAAGTcaatgaaaaaaacacaaaaacatgcaaaaaaagGGGAGCATCGTTTACTTTTCCAGATATTTATAAATGCCAGCATTGCGCTTTTGTAAGTTTGACCGAAAGAAGTTTGCAACTGCACCTCAATTCCAATTTTCAAGGAACCTCCCGTATATGTGAAAATGCCATTAGTCGAACGAAACTACAATGTCTAGGTTGTGACAATATTTTCTACGCTTACTCGGTTGTAGAGACTCATTTACGAGAAGACCATTTAATGTCCGAAGAAGATATAACAGAACTAATGCAGACTATTAAAAGGAATAACCAACCTTCTGAGCCATCGAACACGGTTAGCAACGTAAAAACATCTGATATAGAGGTTTCCAATGACGCCTCTATTAAAGGAATGCAGCGCAGAAGTCGGATATATTTGAAGAATGTTGAATGTTTGCGCGAACCGAATAGAGATCCGATTGAGCAACAAGATAATCTAATCAATGATAGcctttttcattttgaaaatgatGAATGCAATGCACTAGAAAACATTGGCAGCATTAGCATGGAGGAGCAGGATCTTATAGGCATGCTCACTAACGGCGAACCATTATTTCACAACAAAAACGAcaataatattgataatatCGTTAATGAAACTTTAGCGGCAACTGTAGAAACAACCAAGTCAGTAAAtccaccaaaacaaaaaatttccattaagaGTGTTGATGTACTACGTGAACCAGCTTTGGCGCGTCGTGATTATGAGTTGCAATCATTCGGCGATTTCATTAGCGTCTGCAATGATTTAAATTTGCACGTACCAAACAatagcaacaccaacaacaacaacgaaagtaACTGTGATAACAGCCACAGTAGAATAAATGACACGGATGGGCAATACAGTTATTCCGTGCCTCCGAATAGAGAACCACTCGTTGGTAATAATGGCGATGCTGGCATAGCTGAATTCACAAATGAATTCGAAAAACCAAGAAGacctaaaatttatataaaaaacgttGATATACTTAAAGAACCAATGACATTTTCGAACAATATCAATGCTCCATCTATAACAGAGTCCACCAACAACgtaatgaatttcaattttatgcaaCCAACAATACCACAAACGGTGAATTCCTACCTAGATACCGTTGATAGCCTGAACGCAACAGTGCCGCCTTTTAATGGTGGCATGTCACAGCTGCCGCTTGGCACCATATCAGATCAATATCTCTTCGATAGTGGGGGTGGGAACTTTTTAGTAAACAGTACCACCACCGTCTCAGATAACTACACGTATGGCAATGAACAAACTGCAGAAAATTTCCTAATGGATTCTAATCGGTTTGCGGATGCGATAACACCAATGACAACTGAACCTACACCGTCACCTCCTACCATGAGTACAACAGTAAGTCATAATAACAACTGTACGACAGATGCTCAACTAACACAAGCTACTGCCATTACAAATGtgcaaaagcagaaaatttttataaaaaatgtagacATTCTGAAAGAACCGCAGTTCCAAGAACCACGTGGCCTATTACATTTGCGTACTGTGGACGAActaaatttaatgaaccgaaaAGACGTTGAAAACTTAATAGCACCGAATTTGGAGGGCAATCAAGCCAATCTAGTTGAAGAGGAATTGAGTGAAAACTTTGTGCGCTCGAACAATGCAAATGGAGAGTCCCTGTCGGCAATTGATAACTGCAATGCCAGTAATCTAATTGAAGCGATATCCTACGGCTGTGAATCATTTAAATTGAATGAGTTTTCAACACAAAACGGTTGGCATGATGACTATGATTTAGGTGACGATATTAGGGAGATCATAACGAGTACTATGGCGCCAACTTTACCCTCAGCTCAAAAGACAATACACGATTTAGATACACCACAAATATCGCTGATATCGATACCAGATATGGAAGAGCTCACCGGTACTAGTGCTGAACTAAATGTCAGTTCAGAGTCTATAACAAACGTTCACCCTACAATGACTTCGACtgtaacacaacaacaaaaaagtacaaatttcagttttgaatgCGAAATCCCTTCCGCTGAAAACATAAGCCTTGAAGAACCGGTTTGTAGCTCTGAAAATTTAGTTAATGCGACTGCGATCTGTAATGAGGTTATGTCGGAACCTCAAACAGAACCTGAGTCGATTGATACAGCTCTATTAGAAAGCGCAGAAGTACTAAAACAGGAGCGCTTGCATCAAGCCACCCCTGGAGAACATACCGATGCGGCACCTCCACAAAAAAATAAGGCGAACAACTTTGACGACATTCCACCGCTCACACCAATGACTTCAGCTACATATGCTGTGAGCAGTAACTTAAATACCTCAACAACTATTGTTGCTCCGACTGGTTTACCGGTGCCGCCACTTGTACCTATGTTACCACCAAAagctataacaataacaaacgtTAACACGCCTGCGAATTCAACGGAACGTGGACGCATTTATGTAGCGAATAATCTAATGCAAGCACCTAACGCTACGACAATGTCGCAAACACCAAAGGCACAAACACCAACGATCAAATCTCATAGTACGAAGAGCTTAGACAAACAGCAGACCAAAACACCAATTGCTGTCTCTGTAACGGGTGGCACTTCGGTACGTGGCCGTCCGTTTGGTTCGAATCGTACTGGCATAACGAAGCTTCGCAAGCAACCGCTTAATGAAAATGGAGCTGGCGTATACCTGAAGTGCACCGTAACAGGTTGTGCCTTTCGATTTAAAAAGTCCAGCACGCTAGATTATCACATAAGGTGCCATAGCAGTGAATCTCCTCCACAGTCCATGGCATGTCCTGAATGCAAAGCGCCGTTTACCAACTGGAATTCGTTGCATACACACCTCTGGCGTTCGCACAAAATCGACATGGAGCTGTATAGCTGTGAACTGTGCAGCTTCAAAACACCGATATACTCCCGCTTACTAAACACACATTCCAAAATTCATTATGACGAACGCAACTACAAGTGCGACCAGTGCGAGAAAGCTTTCAAGAatacaaaacaattgaaaaatcatcGTCGTTGGCACCGCAACCATAACAAATCCACAACATCTCCATCAGCGAAGCGCGAAATTTCTAAAAAGGCAGATATATCAGCTTCCGAAAGCAACGGTCCAATGGTGTtagcgccaacaacaactaacGCCAGCACATCTGATGCCACACAAGTACCTGTAACCGCAGCGCGTCATTTTTACAGATGCAAGGACTGCGAAGCTGTTTTTTCACATCAGAAAACATTACGAGAGCATCTGTGCAAGAACGCCGCCGCAGCGATACAGTGCGAGGTGTGTGATCGGGTGCTGACGTCACGCTCCTCTATCAAATTGCACATGCAAACGCACGAGTCATCGCGGCGTTTTAAATGTAACGTCTGCGACTATTCTGGCAGTGATCACAACGCCTTTCGACGCCATAAAATGACACACGACAATAATGCGAAGATGTATGCTTGTGTTCACTGTGATTACAAGTCAATACAGAGCGTGGCATATCAGAAACATGTTCAACAAAAACATCCACATGTGGCCGATTCCATCATTTATAAGTGCAAAATGTGCACATATGCCACCATAAATAAGGGTTTATTCGATTTGCATCAAGTGAAACATGAAAAAAAGAATGGCAACATTGAAGCAACTGCTGCAATTCCTGGTGAAAATGCATTTTGCGCAGAAAATGcaacaacagtaaaaacaaAGATCAAAGTAAAGAGCCACTTATTACTGACCACTTCAACAGATTCAACAATGGATTCTAATGAGCTGTGCTTCGATGCAGTAACTATGCCGTCATAG
Protein Sequence
MAAATSIHATIGTDYHKEITPQQSQNQHSRSFHHPSTYNNLIGAMCDGTTQSIVPAQMSFTCNNNNSATYIGNGASNTAFTQIPFVQIHTTDVQPQSAFNSTRFRRNLTNNNQEEIKAEPIKSENSESAKERINGTPTPPVPVQQRSDSQTSKNFTQNEKVIYSHLETTRGHSDEVNEKNTKTCKKRGASFTFPDIYKCQHCAFVSLTERSLQLHLNSNFQGTSRICENAISRTKLQCLGCDNIFYAYSVVETHLREDHLMSEEDITELMQTIKRNNQPSEPSNTVSNVKTSDIEVSNDASIKGMQRRSRIYLKNVECLREPNRDPIEQQDNLINDSLFHFENDECNALENIGSISMEEQDLIGMLTNGEPLFHNKNDNNIDNIVNETLAATVETTKSVNPPKQKISIKSVDVLREPALARRDYELQSFGDFISVCNDLNLHVPNNSNTNNNNESNCDNSHSRINDTDGQYSYSVPPNREPLVGNNGDAGIAEFTNEFEKPRRPKIYIKNVDILKEPMTFSNNINAPSITESTNNVMNFNFMQPTIPQTVNSYLDTVDSLNATVPPFNGGMSQLPLGTISDQYLFDSGGGNFLVNSTTTVSDNYTYGNEQTAENFLMDSNRFADAITPMTTEPTPSPPTMSTTVSHNNNCTTDAQLTQATAITNVQKQKIFIKNVDILKEPQFQEPRGLLHLRTVDELNLMNRKDVENLIAPNLEGNQANLVEEELSENFVRSNNANGESLSAIDNCNASNLIEAISYGCESFKLNEFSTQNGWHDDYDLGDDIREIITSTMAPTLPSAQKTIHDLDTPQISLISIPDMEELTGTSAELNVSSESITNVHPTMTSTVTQQQKSTNFSFECEIPSAENISLEEPVCSSENLVNATAICNEVMSEPQTEPESIDTALLESAEVLKQERLHQATPGEHTDAAPPQKNKANNFDDIPPLTPMTSATYAVSSNLNTSTTIVAPTGLPVPPLVPMLPPKAITITNVNTPANSTERGRIYVANNLMQAPNATTMSQTPKAQTPTIKSHSTKSLDKQQTKTPIAVSVTGGTSVRGRPFGSNRTGITKLRKQPLNENGAGVYLKCTVTGCAFRFKKSSTLDYHIRCHSSESPPQSMACPECKAPFTNWNSLHTHLWRSHKIDMELYSCELCSFKTPIYSRLLNTHSKIHYDERNYKCDQCEKAFKNTKQLKNHRRWHRNHNKSTTSPSAKREISKKADISASESNGPMVLAPTTTNASTSDATQVPVTAARHFYRCKDCEAVFSHQKTLREHLCKNAAAAIQCEVCDRVLTSRSSIKLHMQTHESSRRFKCNVCDYSGSDHNAFRRHKMTHDNNAKMYACVHCDYKSIQSVAYQKHVQQKHPHVADSIIYKCKMCTYATINKGLFDLHQVKHEKKNGNIEATAAIPGENAFCAENATTVKTKIKVKSHLLLTTSTDSTMDSNELCFDAVTMPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00192401;
90% Identity
iTF_00190283;
80% Identity
-