Btry007427.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bactrocera tryoni
Gene Symbol
-
Assembly
GCA_016617805.2
Location
NC:40857394-40865746[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 3 1.8e+02 2.5 0.0 2 23 237 259 236 259 0.87
2 9 2.5 1.5e+02 2.8 2.7 2 21 1086 1107 1085 1109 0.92
3 9 0.0047 0.28 11.4 0.4 3 20 1120 1137 1118 1141 0.93
4 9 6.9e-06 0.00041 20.3 2.7 1 23 1177 1199 1177 1199 0.98
5 9 0.00046 0.028 14.5 3.1 1 21 1256 1276 1256 1277 0.95
6 9 0.00011 0.0067 16.5 0.3 2 23 1284 1305 1283 1305 0.97
7 9 0.0012 0.073 13.2 3.0 1 23 1311 1333 1311 1333 0.99
8 9 0.041 2.4 8.4 1.1 1 23 1340 1363 1340 1363 0.95
9 9 0.0064 0.38 11.0 0.6 1 23 1372 1394 1372 1394 0.97

Sequence Information

Coding Sequence
ATGGCAGCGGCCACTTCGATCCACGCAACTATTGGAACGGATTACCATAAAGAGATAATACCACAGGAATCACAAAATCAACATGCACGGTCTTTCCACCATCCGTCgacatataataatttaattggtGCTGTGTGTGACGGTACTACGCAAAATATAGGTGCCGCACAAATGagttttaattgtaataataataacagtgcAACGTATATAGGTAACGGCTCGAGTAATACTGCTTTTACACAAATACCATTCGTTCAAATTCACACGACGGATGTGCAGCCACAGAGTGTATTTAATAGTACAAGATTTAGAAGAAATCTCACTAATAATAAccaagaagaaataaaagctGAACCAATAAAGTCGGAAAATTCTGAAAGTGCCAAAGAACGAATAAATGGAACTCCCACACCACCAGTACCTGTGCAGCAGAGAAATGAAAGCCAAACTTCTAAAAATTTAACTCAAATTGAGAAAGTAGTTTATGCGGATTTAGAAACTACCCGTGAACCTTCGGATGAAGTCaatgaaaaaaacacaaaaacatgcACAAAAAGGGGAACATCGTTTacatttccaaatatttataaatgccAGCATTGTGCTTTTATAAGTTTGACCGAAAGAAGTTTACAACTCCACCTCAATTCCAGCTTTCAAGGGACCTCCCGCATATGTGAAAATGCCATTAGTCGAACGAAACTACCATGTCCAGGTTGTGACAATATTTTCTACGCTTACACGGTTGTAGAGACTCATTTACGAGAAGACCATTTAATGTCCGAAGAAGATATAACAGAACTAATGCAGACTATTAAAAGGAATAACCAACCTTCTGAGCAATCGAACACAGTTAGCAACGTAAAAACATCTGATTTAGAGGGTTCCAATGACGCTTTAATTAAGGGAACGCAACGCCGAAGTCGGATATATTTGAAGAATGTTGAATGTTTGCGGGAACCGAATAGAGATCCGATTGAGCAACAAGATAATCTAATTAATGATAGCCtctttcattttgaaaatgatGAATGCAATGCACTCGAAAACATTGGCAGCATTAGCATGGAGGAGCAGGATCTTATAGGCATGCTCACTAATGGTGAACCATTATTTCACAACAAAAGCGACAATAATATTGATAATATCGTTAATGAAACTATAGCGGCAACTATAGAAACAAATAAGTCAGTAAatccacaaaaacaaaaaatttccattaaGAGTGTTGATGTACTACGTGAGCCAGCTTTGGCGCGTCGTGGTTATGAGTTGCAACCATTCGGAGATTTCATTAGCGTCTGCAATGATTTAAATTTGCACGTAccaaacaatagcaacaacagcaataacaacgaAAGTAACTGTGATAACAGCCACAGTAGAATAAATGACACGGATGCGCAATATAGTTATTCCGTGCCTTCCAATAGAGAACCACTCGTTGGTAACAATGGCGATGCTGGCATAGCTGAATTTACGAATGAATTCGAAAAACCAAGAAGAcctaaaatttacataaaaaacgtTGATATACTTAAAGAACCAATGACATTTTCGAACAATGTCAATGCTCCATCTATAACAGAGTCCACTAACAACGtaatgaatttcaattttatgcaACCAACAATACCACAAACGGTGAATTCCTATCTAGATACCGTTGATAACCTAAACGCAACAGTGCCACCTTTTAATGGTGGCATGTCACAGCTCCCGCTTGGCACCATATCAGATCAATATCTCTTCGATAGTGGAAGTGGGAACTTTTTAGTAAACAGTACCACCACCGTCTCAGATAACTACACTTATGGCAATGAGCAAACTACAGAAAACTTCCTAATGGATTCTAATCGGTTTGCTGATGCGATAACACCAATGACCACTGAACCTACACCGTCACCTCCTACCATGAGTACAACAGTAAGTCATAATAACAACTGTACGACAGATGCTCAACTTACACAAAACGCCAATGCCATTGCAAATGTACAAAAgcagaaaattttcataaaaaatgtagaTATTCTGAAGGAACCACAGTTCCAAGAGCCACGTGGCCTACTACATTTGCGTACCGTCGacgaattaaatttaatgaaccgaaaAGACGTTGAAAACTTAATAGCACCGAATTTGGATGGGAATCAAGCAAATCTAGTTGAAGAGGAACTGAGTGATAACTTTGCGCGATCGAATAATGCAAATGGAGAGTCTTTGTCGGCCATTGATAACTGCAATACCAGTAATTTAATTGACGCGATATCCTATGGCTGTGAAGGATTTAAATTGAATGAGTTTTCAACACAAAATGGTTGGCACGATGACTATGATTTGGGTGACGATATTAGGGAGATAATAACGAGTACCATGGCGCCAACTTTATCCTCAGCTCAGAAGACTATACACGATTTGGATACACCACAAATATCGCTGATATCGATACCAGATATGGAAGAGCTCACCGGTACAAGTGCTGAACTTAATGTCAGTTCAGAGTCTGTAACAAGCGCGGACCCTACAATGACATCGACTGTAACACAACAGCAAATAAgtacaaatttcacttttgaaTGTGAAATCCCCTCTGCAGAAAATATTAGTCTTGAAGAGCCGGTTTGTAACTCTGAAAATTTAGTCAATACCTCTGCGATCTGTAATGAGGTTATGACGGAACCTCAAACAGAACCTGAGTCGATTGATACAGCTCGATTAGAAAACGCAGAAGTACTAAAACAGGAGCGCTTGAATCAAGCCACTCCTGGAGAACATACCGATCAGGCGTCTACTCAAAAAAATAAGGCAAACAATTTTGATGACATTCCACCGCTCACACCAATGACTTCAGCTACATATGCTGTGAGCAGTAACTTAAATACCTCAACAACTATTGTTGCTCCGACTGGTTTACCGGTGCCGCCACTTGTACCTATGTTACCACCAaaagctataacaacaacaaacgttaACACGCCTGCGAATTCAACGGAACGTGGACGCATTTATGTAGCGAATAATCTAATGCAAGCACCCAACGCTGCGACAATGGCGCAAACACCAAAGGCACAAACACCAACGACCAAATCTCTTAGTACGAAGAGCTTAGACAAACAGCAGACCAAAACACCAATTGCTGTCTCAGTAACGGGCGGCACTTCGGTACGTGGCCGCCCGTTTGGTTCGAATCGTACTGGCGTAACGAAGCTTCGTAAGCAACCGCTTAATGAAAACGGAGCTGGCGTATACCTGAAGTGCACCGTAACAGGTTGTGCCTTTCGATTTAAAAAGTCTAGCACGCTAGATTaccatataaagtgccatagcAGTGAATCTCCACCACAGTCCATGGCATGTCCTGAATGCAAAGCACCGTTCACCAACTGGAATTCGTTGCATACACACCTCTGGCGTACGCACAAAATCGACATGGAGCTATATAGCTGTGAACTGTGCAGCTTCAAAACACCCATATACTCACGGTTACTAAACACACATTCCAAAATTCATTATGACGAACGCAACTATAAGTGTGACCAGTGCGAAAAAGCTTTCAAGAATACAAAGCAATTGAAAAATCATCGTCGTTGGCACCGCAACCATAACAAATCCACAACACCTCCATCAGCGAAGCGTGAAGTTTCCAAAAAATCAGATGTATCAGCTTCCGAAAGCGGCAGTCCAGCGCTATTGCCGCCAACAACAACTAGGGCAAGCACATCTGATGCCACTCAAGTACCTGTAAACGCAGCGCGTAATTTTTACAGATGCAAGGACTGCGAAGCTGTTTTTTCACATCAGAAAACTTTACGAGAACATCTGTGCAAGAACGCCGCCGCAGCAATACAGTGCGAGGTGTGCGATCGGGTGCTGACGTCACGCTCCTCTATCAAGTTGCACATGCAAACGCACGAGTCTTCGCGGCGTTTTAAATGTAACGTCTGTGACTATTCTGGCAGTGATCACAACGCCTTTCGACGCCACAAGATGACACACGACAATAATGCGAAGATGTATGCTTGTGCTCACTGTGATTACAAGTCAATACAAAGCGTAGCCTATCAGAAACATGTTCAACAAAAACATCCACAAGTGGCTGATTCCATCGTTTATAAGTGcaaaatatgcacatatgtcACCATAAATAAGGGTTTATTCGACGTGCATCAAGTGAAACATGAAAAAAAGAATGGCAACATTGAAGCAACCGCTGCACTTCCTGGTGAAAATGCAGGCGCGGAAAAGACAACAACTGTAAAAACGAAGATAAAAGTAAAGAGCCACTTATTACTGACCACTTCGACAGATTCAACAATGGAATCTAATGAATTATGCTTCGATGCAGTAACTATGCCGTCATAG
Protein Sequence
MAAATSIHATIGTDYHKEIIPQESQNQHARSFHHPSTYNNLIGAVCDGTTQNIGAAQMSFNCNNNNSATYIGNGSSNTAFTQIPFVQIHTTDVQPQSVFNSTRFRRNLTNNNQEEIKAEPIKSENSESAKERINGTPTPPVPVQQRNESQTSKNLTQIEKVVYADLETTREPSDEVNEKNTKTCTKRGTSFTFPNIYKCQHCAFISLTERSLQLHLNSSFQGTSRICENAISRTKLPCPGCDNIFYAYTVVETHLREDHLMSEEDITELMQTIKRNNQPSEQSNTVSNVKTSDLEGSNDALIKGTQRRSRIYLKNVECLREPNRDPIEQQDNLINDSLFHFENDECNALENIGSISMEEQDLIGMLTNGEPLFHNKSDNNIDNIVNETIAATIETNKSVNPQKQKISIKSVDVLREPALARRGYELQPFGDFISVCNDLNLHVPNNSNNSNNNESNCDNSHSRINDTDAQYSYSVPSNREPLVGNNGDAGIAEFTNEFEKPRRPKIYIKNVDILKEPMTFSNNVNAPSITESTNNVMNFNFMQPTIPQTVNSYLDTVDNLNATVPPFNGGMSQLPLGTISDQYLFDSGSGNFLVNSTTTVSDNYTYGNEQTTENFLMDSNRFADAITPMTTEPTPSPPTMSTTVSHNNNCTTDAQLTQNANAIANVQKQKIFIKNVDILKEPQFQEPRGLLHLRTVDELNLMNRKDVENLIAPNLDGNQANLVEEELSDNFARSNNANGESLSAIDNCNTSNLIDAISYGCEGFKLNEFSTQNGWHDDYDLGDDIREIITSTMAPTLSSAQKTIHDLDTPQISLISIPDMEELTGTSAELNVSSESVTSADPTMTSTVTQQQISTNFTFECEIPSAENISLEEPVCNSENLVNTSAICNEVMTEPQTEPESIDTARLENAEVLKQERLNQATPGEHTDQASTQKNKANNFDDIPPLTPMTSATYAVSSNLNTSTTIVAPTGLPVPPLVPMLPPKAITTTNVNTPANSTERGRIYVANNLMQAPNAATMAQTPKAQTPTTKSLSTKSLDKQQTKTPIAVSVTGGTSVRGRPFGSNRTGVTKLRKQPLNENGAGVYLKCTVTGCAFRFKKSSTLDYHIKCHSSESPPQSMACPECKAPFTNWNSLHTHLWRTHKIDMELYSCELCSFKTPIYSRLLNTHSKIHYDERNYKCDQCEKAFKNTKQLKNHRRWHRNHNKSTTPPSAKREVSKKSDVSASESGSPALLPPTTTRASTSDATQVPVNAARNFYRCKDCEAVFSHQKTLREHLCKNAAAAIQCEVCDRVLTSRSSIKLHMQTHESSRRFKCNVCDYSGSDHNAFRRHKMTHDNNAKMYACAHCDYKSIQSVAYQKHVQQKHPQVADSIVYKCKICTYVTINKGLFDVHQVKHEKKNGNIEATAALPGENAGAEKTTTVKTKIKVKSHLLLTTSTDSTMESNELCFDAVTMPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00192401;
90% Identity
iTF_00190283;
80% Identity
-