Bdor000973.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bactrocera dorsalis
Gene Symbol
-
Assembly
GCA_000789215.2
Location
NW:1974742-1982154[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 7.2 4.1e+02 1.3 0.6 1 21 199 219 199 220 0.85
2 10 0.81 46 4.3 0.0 2 23 239 261 238 261 0.92
3 10 2.4 1.3e+02 2.8 2.7 2 21 1087 1108 1086 1110 0.92
4 10 0.0045 0.25 11.4 0.4 3 20 1121 1138 1119 1142 0.93
5 10 6.5e-06 0.00037 20.3 2.7 1 23 1178 1200 1178 1200 0.98
6 10 0.00044 0.025 14.5 3.1 1 21 1257 1277 1257 1278 0.95
7 10 0.00011 0.006 16.5 0.3 2 23 1285 1306 1284 1306 0.97
8 10 0.0012 0.066 13.2 3.0 1 23 1312 1334 1312 1334 0.99
9 10 0.038 2.2 8.4 1.1 1 23 1341 1364 1341 1364 0.95
10 10 0.039 2.2 8.4 0.9 1 23 1373 1395 1373 1395 0.97

Sequence Information

Coding Sequence
ATGGCAGCGGCCACTTCGATTCACGCACCTATCGGAACGGATTACCATAAAGAGATAATACCGCAgccaacacaacagcaacattcACGGTCTTTTCACCATCCGTCgacatataataatttaattggtGCTGTGTGTGACGGTACTACGCAAAATATAGTTCCCGCACAAATGAGTTTtacttgtaataataataataataacagtgcAACATATATTGGTAATGGCGCGAGTAATACTGCCTTTACACAAATACCATTCGTTCAAATCCACACGACGGATGTGCAGCCACAGAGTGCATTTAATAGTACAAGATTTAGAAGAAATCTCACTAATAAtaatcaagaagaaataaaagctGAACCAATAAAGTCGGAAAATTCTGAAAGTGCCAAAGAACGAATAAATGGAACTCCCACACCACCAGTACCTGTGCAGCAGAGAAGTGAAAGCCAAGcttctaaaaattttactcaaaatgaaaaagtagtttATTCGGATTTAGAAACTACCCGTGGATCTTCGGATGAAGtcaatgaaaaaacaacaaaaacatgcacaAAAAGGGGAACATCGTTTACATTTccagatatttttaaatgccaGCATTGTGCTTTTGTAAGTTTGACCGAAAGAAGTTTGCAACTGCACCTCAATTCCAACTTTCAAGGAACCTCCACAATATGTGAAAATGCCATTAGTCGAACGAAGCTACCATGTCCAGGTTGTGACAATATTTTCTACGCTTACTCGGTTGTAGAGACTCATTTACGAGAAGACCATTTAATGTCCGAAGAAGATATATCAGAACTAATGCAGACTATTAAAAGGAATAACCAACCTTCTGAGCAATCGAACACAGTTAGCAACGTAAAAACATCTGATATAGAGGTTTCCAATGACGCTTCAATTAAGGGAACGCAGCGCAGAAGTCGGATATATTTGAAGAATGTTGAATGTTTGCGGGAACCGAATAGAGATCCGATTGAGCAACAAGATAATCTAATCAATGATAgcctttttcattttgaaaatgatgAATGCAATGCACTAGAAAACATTGGTAGCATTAGCATGGAGGAGCAGGATCTTATAGGCATGCTAACTAACGGCGAACCGTTATTTCACAATAAAAGCGACAACAATATTGATAATATCGTTAATGAAACTATTGCGGCAACTGTAGAAACAAATAAGACAGTAAAtccaccaaaacaaaaaatttccattaagaGTGTTGATGTACTACGTGAACCAGCTTTAGCGCGTCGCGATTATGAGTTGCAATCATTCGGAGATTTCATTAGCGTTTGCAATGATTTAAATTTGCATGTaccaaacaacagcaacaacaacaacaacgaaagtaACTGTGATAACAGTCACAGTAGAATAAATGACACGGATGGGCAATACAGTTATTCCGTGCCTCCGAATAGTAGAGAACCACTCGTTGGTAACAATGGCGATGCTGGCATAGCTGAATTCACAAATGAATTCGAAAAACCAAGAAGAcctaaaatttacataaaaaacgtTGATATACTTAAAGAACCAATGACATTTTCGAACAATGTCAATGCTCCATCTATAACAGACTCCACTAACAACgtaatgaatttcaattttatgcaaCCAACAATACCACAAACAGTGAATTCCTACCTAGATACCGTTGATAGCCTGAACGCAACAGTGCCGCCTTTTAATGGTGGCATGTCACAGCTTCCGCTTGGCACCATATCAGATCAATATCTCTTCGATAGTGGAGGTGGGAACTTTTTAGTAAACAATACCACCACCGTCTCAGATAACTACACGTATGGTAATGAGCAAACTGCAGAAAATTTCCTAATGGATTCTAATCGGTTTGCGGATGCGATAACACCAATGACAACTGAACCTGCACCGTCACCTCCTACCATGAGTACAACAGTAAGTCATAATAACAACTGTATGACAGACGCTCAGCTAACACAAAATGCTACTGCCATTACAAATGtgcaaaagcagaaaatttttataaaaaatgtagatattCTGAAAGAACCGCAATTCCAAGAGCCACGCGGCCTACTACATTTGCGTACCGTCGACGAATTGAACTTAATGAATCGAAAAGACGTTGAAAACTTAATAGCACCGAATTTGGAGGGGAATCAAGCAAATCTGGTTGAAGAGGAACTGAGTGATAACTTTGCGCGATCGAACAATGCAAATGGAGAGTCATTGTCGGCCATTGATAATTGCAATGCCAGTAATCTAATTGAAGCGATATCGTATGGTTGTGAAGGATTTAAATTGAATGAGTTTTCAACACAGAACGGTTGGCACGATGACTATGATTTGGGTGACGATATTAGAGAGATCATAACGGGTACGATGGCGCCAACTTTACCCTCAGCTCAAAAGACAATACACGATTTGGATACACCACAAATATCGCTGATATCGATACCAGATATGGAAGAGCTCACCGGTACTAGTGCTGAACTCAATGTCAGTTCAGAGTCTGTAACAAACGTTGACCATACAATGACTTCGACtgtaacacaacaacaaacaagtacaaatttcacttttgaatGTGAAATCCCCTCCACAGAAAATATTAGTCTTGAAGAACCGGTTTGTAGCTCTGAAAATTTAGTTAATACCACTGCGATCTGTAATGAGGTAATGCCGGAACCTCAAACAGAACCTGAGTCGATTGATACAACTCTATTAGAAAGCACAGAACTACTAAAACAGGAGCGCTTAAATCAAGCCACTCCTGGAGAACACACCGATCCGGTGcctacacaaaaaaataaggCTAACAACTTTGATGACATTCCACCACTCACACCAATGACTTCAGCTACATATGCTGTGAGTACGAACTTAAATACCTCAACAACTATTGTTGCTCCGACTGGTTTACCGGTGCCGCCACTTGTACCTATGTTACCACCAAAAGCTATTGCACTTACTAATGTTAACACGCCTGCGAATTCAACGGAACGTGGTCGCATTTATGTAGCGAATAACCTAATGCAAGCACCTAACGCAGCGTCAATGGCGCAAACACCAAAGGCACAAGCACCAACCAAATCTCATAGTACGAAAAACTTAGACAAACAGCAGACCAAAACACCAATTGCTGTCTCAGTAACGGGCGGCACTTCGGTACGTGGTCGTCCGTTTGGTTCGAATCGTACTGGCGTAACGAAGCTTCGCAAGCAACCGCTTAATGAAAACGGGGCTGGCGTATACCTGAAGTGCACCGTAACAGGTTGTGCCTTTCGATTTAAAAAGTCTAGCACGCTAGACTaccatataaagtgccatagcAGtgAATCTCCTCCACAGTCCATGGCATGTCCTGAATGCAAAGCACCGTTCACCAATTGGAATTCGTTGCATACACACCTCTGGCGTACGCACAAAATCGACATGGAGCTATATAGCTGTGAACTGTGCAGCTTCAAAACACCCATATACTCACGCTTATTAAACACACATTCCAAAATTCATTATGACGAACGCAACTATAAGTGCGACCAGTGCGAGAAAGCTTTCAAGAATacaaagcaattgaaaaatCATCGTCGTTGGCACCGCAACCATAACAAAACTACAACATCTCCATCAGCGAAGCGGGAAGTTTCAAAAAAGGCAGATGCATCAGCTTCCGAAAGCAATGGTCCAACGCTGTtaccgccaacaacaactagcGCAAGCACATCTGATGCCACTCAAGTACCTGTAACCGCAGCGCGTCATTTCTATAGATGCAAGGACTGCGAAGCTGTTTTTTCACATCAGAAAACATTACGAGAACATCTGTGCAAGAACGCCGCCGCAGCGATACAGTGCGAGGTGTGCGATCGGGTGCTGACGTCACGCTCCTCTATCAAGTTGCACATGCAAACGCACGAGTCATCGCGGCGTTTTAAATGTAACGTCTGCGACTATTCTGGCAGTGATCACAACGCCTTTCGACGCCACAAAATGACACACGACAATAATGCGAAGATGTATGCTTGTGCGCACTGTGATTACAAGTCAATACAGAGCGTAGCCTACCAGAAACATGTTCAACAAAAACATCCACAAGTGGCCGATTCCATCGTTTACAAGTGCAAAATGTGCACATATGCCACCATAAATAAGGGTTTATTCGATTTGCATCAAGTGAAACATGAAAAAAAGAATGGCAACATTGAAGCAACCGCTGCACTTCCTGGTGAAAATGCAGGTTGCGCGGAAAAGACAACAACTGTAAAAACGAAGATAAAAGTAAAGAGCCACTTATTACTGACCACTTCGACAGATTCAACAATGGAATCTAATGAGCTATGCTTCGATGCAGTAACTATGACGTCATAG
Protein Sequence
MAAATSIHAPIGTDYHKEIIPQPTQQQHSRSFHHPSTYNNLIGAVCDGTTQNIVPAQMSFTCNNNNNNSATYIGNGASNTAFTQIPFVQIHTTDVQPQSAFNSTRFRRNLTNNNQEEIKAEPIKSENSESAKERINGTPTPPVPVQQRSESQASKNFTQNEKVVYSDLETTRGSSDEVNEKTTKTCTKRGTSFTFPDIFKCQHCAFVSLTERSLQLHLNSNFQGTSTICENAISRTKLPCPGCDNIFYAYSVVETHLREDHLMSEEDISELMQTIKRNNQPSEQSNTVSNVKTSDIEVSNDASIKGTQRRSRIYLKNVECLREPNRDPIEQQDNLINDSLFHFENDECNALENIGSISMEEQDLIGMLTNGEPLFHNKSDNNIDNIVNETIAATVETNKTVNPPKQKISIKSVDVLREPALARRDYELQSFGDFISVCNDLNLHVPNNSNNNNNESNCDNSHSRINDTDGQYSYSVPPNSREPLVGNNGDAGIAEFTNEFEKPRRPKIYIKNVDILKEPMTFSNNVNAPSITDSTNNVMNFNFMQPTIPQTVNSYLDTVDSLNATVPPFNGGMSQLPLGTISDQYLFDSGGGNFLVNNTTTVSDNYTYGNEQTAENFLMDSNRFADAITPMTTEPAPSPPTMSTTVSHNNNCMTDAQLTQNATAITNVQKQKIFIKNVDILKEPQFQEPRGLLHLRTVDELNLMNRKDVENLIAPNLEGNQANLVEEELSDNFARSNNANGESLSAIDNCNASNLIEAISYGCEGFKLNEFSTQNGWHDDYDLGDDIREIITGTMAPTLPSAQKTIHDLDTPQISLISIPDMEELTGTSAELNVSSESVTNVDHTMTSTVTQQQTSTNFTFECEIPSTENISLEEPVCSSENLVNTTAICNEVMPEPQTEPESIDTTLLESTELLKQERLNQATPGEHTDPVPTQKNKANNFDDIPPLTPMTSATYAVSTNLNTSTTIVAPTGLPVPPLVPMLPPKAIALTNVNTPANSTERGRIYVANNLMQAPNAASMAQTPKAQAPTKSHSTKNLDKQQTKTPIAVSVTGGTSVRGRPFGSNRTGVTKLRKQPLNENGAGVYLKCTVTGCAFRFKKSSTLDYHIKCHSSESPPQSMACPECKAPFTNWNSLHTHLWRTHKIDMELYSCELCSFKTPIYSRLLNTHSKIHYDERNYKCDQCEKAFKNTKQLKNHRRWHRNHNKTTTSPSAKREVSKKADASASESNGPTLLPPTTTSASTSDATQVPVTAARHFYRCKDCEAVFSHQKTLREHLCKNAAAAIQCEVCDRVLTSRSSIKLHMQTHESSRRFKCNVCDYSGSDHNAFRRHKMTHDNNAKMYACAHCDYKSIQSVAYQKHVQQKHPQVADSIVYKCKMCTYATINKGLFDLHQVKHEKKNGNIEATAALPGENAGCAEKTTTVKTKIKVKSHLLLTTSTDSTMESNELCFDAVTMTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00192401;
90% Identity
iTF_00190283;
80% Identity
-