Basic Information

Insect: Zeugodacus cucurbitae
Gene Symbol: -
Assembly: GCA_028554725.2
Location: CM053021.1:39086351-39092063[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.4 5.7e+02 2.4 0.0 3 23 260 281 259 281 0.93

2 9 9.7 1.3e+03 1.3 2.1 2 21 1102 1123 1101 1125 0.92

3 9 0.013 1.8 10.3 0.4 3 20 1136 1153 1134 1157 0.93

4 9 8.7e-06 0.0011 20.3 2.7 1 23 1193 1215 1193 1215 0.98

5 9 0.00059 0.078 14.5 3.1 1 21 1269 1289 1269 1290 0.95

6 9 0.0012 0.16 13.5 0.3 2 23 1297 1318 1296 1318 0.97

7 9 0.00082 0.11 14.1 2.9 1 23 1324 1346 1324 1346 0.99

8 9 0.068 9 8.0 1.2 1 23 1353 1376 1353 1376 0.95

9 9 0.0053 0.7 11.5 0.5 1 23 1385 1407 1385 1407 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.4	5.7e+02	2.4	0.0	3	23	260	281	259	281	0.93
2	9	9.7	1.3e+03	1.3	2.1	2	21	1102	1123	1101	1125	0.92
3	9	0.013	1.8	10.3	0.4	3	20	1136	1153	1134	1157	0.93
4	9	8.7e-06	0.0011	20.3	2.7	1	23	1193	1215	1193	1215	0.98
5	9	0.00059	0.078	14.5	3.1	1	21	1269	1289	1269	1290	0.95
6	9	0.0012	0.16	13.5	0.3	2	23	1297	1318	1296	1318	0.97
7	9	0.00082	0.11	14.1	2.9	1	23	1324	1346	1324	1346	0.99
8	9	0.068	9	8.0	1.2	1	23	1353	1376	1353	1376	0.95
9	9	0.0053	0.7	11.5	0.5	1	23	1385	1407	1385	1407	0.98

Sequence Information

Coding Sequence: ATGAACGAAGGAGTTATCTCCAGTTACGAGCAATTATTTGGTGGTTCTGGTTTGCCGTCTGACCTCGGTATAGAAATGGCGGCCACTTCGATTCACGTTGCCCTCGGAACAGACTACCATAAAGAAATAGCTCCACAGCAGCCACAGAATCAACAATCACGGTCTTTTCACCATCCGCCGACGTACAACAATTTTATTGGTACTACAGGTGACGGCACGACTCAAAATATCGGCTCCAAACAGATGGGGTTTGCTTGTAATAACAGTAGTGCATCCTTTATTGGTAACGGTGGGAGTAATACAGTGTTTACACAAATTCCATTTGTTCAAATTCACACGACGAATGTGCAGCCACAAAGTGCATTTAATAGTACACGATTCAGAAGAAATGTCACCAACAATCAAGAAGAAATTAAAGCTGAACCAATAAAGTCAGAAAATTCTGAAGGTGCCAAAGAGCGTACAAATGGAACACCCACACCACCAGTACCTGTGCAACAGCGTAGTGATAACCaaacttctaaaaattttactcaaaatGAGAAGGAAGTTTTTACTGATTTAGAAACTATTCGCGGAATTGCGGATGAGGTAATTGAACAAAACACCAAAACATGTACAAAAGAGGGAGCAGGATTTACATCTCCAGATATCTATAAATGTCAACATTGTGCTTTTATAAGTTTGACCGAAAGGGGTTTGCAACTCCATCTCGATTCCAGATTTCAAGAAAATTCTGTAGTATGTAAAGATGCCCATAGTCGAAGAAAACTACTTTGTCCAGGTTGTGAAAATGTTTTCTACGCTTACTCGGTTGTAGAAATTCATTTACGGGAAGACCATTTAATGTCCGAACAGGATgtaatagtatttatgcaaactaTTAAGAAAAATAGTCAACCCTCTGAACATTCCGAATCAACTAACAACGAAAAAGGTTCTGATATAGAAGTTTCGAACGACACTCCAATTAAGAGCACGCAACCACGAAGTCGTATATATTTGAAGAATGTCGAATGCTTGCGGGAACCGAATAGAGATCCGATTGAACAGCaagataatataattaatgatagtatttttcattttgaaaatgaTGAGTGTAATACACTTGAAAACATTGGTAGCATTAGCATGGAGGAGCAGGACCTTATAGGTATGCTCACCAGCGGTGAAGGAACATTTCATAATAAAGGTGACAATAATGTTGACTCTATTCTTAATGATACTTTTACGCCAGCTGTGGAATCAAATAAGTCAGTAAATCCacctaaacaaaaaatttcgattaaGAGTGTTGATGTGCTACGAGAACCAGCGCTGTTGCGACGTGATTATGAGATGCAATCATTTGGAGATTTCATTAACGTCTGTAATGATTTAAATTTGCATACGcctaacaccaacaacaacgaaataagTAACTGTGATGACAACCACAATAGAATAAATGACACGGATGGCCAATATAGTTACACCGTAACTCCGATTAGAGAACCGCTCGTGGGTAACAATGACGATGCCGCCATCGTTGATTTCACGAATGATTTCGAGAAACCAAGAAGAcctaaaatttacataaaaaacgtTGATATACTGAAAGAACCAATGACATTTTCGAGCAATATCAATGCGCCGGCTATAACGGAGTCTACAAATAAcgtaatgaattttaattttatgcaacCGACAATACCGCAAACTGTGAACTCTTACCTAGATTCCGTTGATAGCCTGAACGCCACAGTACCGCCTTTTAATAGTGGCATGTCACAGCTACCGCTTGGTACCATATCGGATCAATATCTCTTCGAAAGCGGAGGTGGGAACTTTCTAGTAAACAGTTCCACCACTGTCTCAGACAATTACACTTATGGCAATGAGCAAACTTCAGAACACTTCTTAATGGATTCTAATCGGTTTACAGATGCGATAACACCAATGACAACTGAACCTACACCGCCACCTCCTACGATGAGTACAGTAGTAAGTAACACTAACAGTTGTACCATTGATGCGCAGCCTACACAAAACGCCTCTGCCATTCCAAATGAGCCAAAgcagaaaatttttataaaaaatgtggataTTCTGAAAGAACCGCAGTTCCAAGAGCCTCGCGGCTTACTGCATTTGCGCACTGTCGacgaattaaatttaatgaacaGAAAAGATGTTGAAAATCTGATAGCACCTAATTTGGAGGGCAACCAAACCAATCTAACTGAAGAGGAACTGGGTGATAACTTTACGCGATTGAACAATGCGAATAGAGAGACATTGTCGTCTGTTGAAAACTGCAATGCCAGCAATCTAATTGAGGCGATATCTTACGGATGTGAAGGATTTAAATTGAATGAGTTTTCAACACAAAACGGTTGGCATGATGACTATGATTTGGGAGACGATATTAGGGAGATCATAACCAGTACTATTGCGCCAACTTTACCAACAGCACAGAAGACAATACATGAGTTGGATACACCACAAATATCACTGATCTCCATACCAGATATGGAAGAGCTCACCGGTACAAATGCTGCAGTTAATGCCAATGCAGAGTCAGTAGCAAGCGGGAACACTACAGTAACCTCGGatgtagcacaacaacaacaatcaagtgCAAATTTCACTTTTGAATGTGAAATACCCACTGCTGATATAAATGGCGCCGAAGAACCTGTTTGTAGTTCTGAAAATTTGATCAATTCCACTGCAATCTGTAATGAGGTTATGTCGGATCCTCAAACAGAACCTGAGTCGATAGATACAGTTCTATTAGAAAACGAAGAATTACTGAAACAAGAGCGCTTGAATCAAACCACACCTGTAGAACATACCGAATCCACGTCttcacaaaaaacaaataaggcaAGCGACTTTAATGACATTCCACCGCTCACACCAATGACTTCAACTACATATTCGATATGTACTAACTTAATTACCTCAACATCAATGGCTGCACCCACTGGTTTGCCGGTGCCGCCACTTGTACCTATGCTACCACCGAAAGCTATCAGTTTATCTAATGTTAGCACCCCTGCGAATTCAACGGAACGTGGACGTATTTATGTGGCTAATAACCTAATGCAAGCGCCTAACGCTTCGCCAATTTCGCAAACACCAACGTCTAAAACTAATAATACGAAGAGCTTAGGCAAACAGCATCCCAAAACTCCGATTGCCGTTTCGGTAATGGGTGGAACTTCGGTACGTGGGCGACCGTTTGGTTCGAATCGTACTGGCATAACCAAGCTTCGCAAGCAACCGCTTAACGAAAACGGCGCAGGTGTTTACCTGAAGTGCACAGTCGCGGGTTGCGCCTTCCGATTTAAAAAGTCTAACACACTTGATTACCACATAAAATGTCATATCAACGAGTCTCAACCTCAATCAATGGCATGCCCTGAGTGTAGAGCGCCGTTCACGAACTGGAATTCGCTGCATACACACCTCTGGCGTACGCATAAAATCGACATGGAGCTGTACAGCTGTGAATTGTGTAGCTTCAAAACACCCATATATTCACGCTTATTAAACACGCATTCCAAAATTCATTATGACGAACGAAACTACAAGTGTGATCAGTGCGAGAAGGCTTTCAAGAATACAAAGCAGTTGAAAAATCATCGTCGTTGGCACCGCAACCATAATAAATCCACAACATCTCCATCAACGAAGCCAGAGATCTCAATGAAGGCAGATTTGCCACCTTCTGAAAGCAGCGCTGCTGTGCAGCATTCGCTTTCAGCAACTACCACATCCGATGCGACACAAGTACCTGTAACCGTGCGTAATTTTTATCGCTGCAAGGACTGCGAAGCTGTTTTTTCACATCAGAAAACATTACGAGAGCATCTGTGCAAGAACGCTGCTGCAGCAGTACAGTGCGAGCTGTGCGATCGCGTGCTGACTTCTCGCTCCTCCATCAAGTTGCACATGCAATTACACGAGCCATCGCGTCGCTTCAAATGCAACATCTGCGATTATTCCGCCAGTGATCATAACGCTTTTCGGCGGCACAAAATGACACACGACAATAATGCGAAAATGTATGCTTGCGTTCACTGTGATTACAAGTCCATACAAAGTGTGGCCTATCAGAAACATGTTCAACAAAAACACCCACAATTGGCCGATTCCATCGTCTATAAGTGTAAGATCTGCCCATTTGCCACCATAAACAAGAGCTTATTCGATATACACCAAGTTAAGCATGAAAATAAGAATGACAACACTGAAGGCGCTGATGTGGCGGAAAATGTAGatgcacaaaaaacaacaacggcaaAAACAAAGATTAAAGTCAAGAGTCACTTATTATTGACCACTACGGCCGATTCAACAACGGAATTAAACGAGTTATGCGTTGATGCAGTAGCCAATATGGTATCTTAG
Protein Sequence: MNEGVISSYEQLFGGSGLPSDLGIEMAATSIHVALGTDYHKEIAPQQPQNQQSRSFHHPPTYNNFIGTTGDGTTQNIGSKQMGFACNNSSASFIGNGGSNTVFTQIPFVQIHTTNVQPQSAFNSTRFRRNVTNNQEEIKAEPIKSENSEGAKERTNGTPTPPVPVQQRSDNQTSKNFTQNEKEVFTDLETIRGIADEVIEQNTKTCTKEGAGFTSPDIYKCQHCAFISLTERGLQLHLDSRFQENSVVCKDAHSRRKLLCPGCENVFYAYSVVEIHLREDHLMSEQDVIVFMQTIKKNSQPSEHSESTNNEKGSDIEVSNDTPIKSTQPRSRIYLKNVECLREPNRDPIEQQDNIINDSIFHFENDECNTLENIGSISMEEQDLIGMLTSGEGTFHNKGDNNVDSILNDTFTPAVESNKSVNPPKQKISIKSVDVLREPALLRRDYEMQSFGDFINVCNDLNLHTPNTNNNEISNCDDNHNRINDTDGQYSYTVTPIREPLVGNNDDAAIVDFTNDFEKPRRPKIYIKNVDILKEPMTFSSNINAPAITESTNNVMNFNFMQPTIPQTVNSYLDSVDSLNATVPPFNSGMSQLPLGTISDQYLFESGGGNFLVNSSTTVSDNYTYGNEQTSEHFLMDSNRFTDAITPMTTEPTPPPPTMSTVVSNTNSCTIDAQPTQNASAIPNEPKQKIFIKNVDILKEPQFQEPRGLLHLRTVDELNLMNRKDVENLIAPNLEGNQTNLTEEELGDNFTRLNNANRETLSSVENCNASNLIEAISYGCEGFKLNEFSTQNGWHDDYDLGDDIREIITSTIAPTLPTAQKTIHELDTPQISLISIPDMEELTGTNAAVNANAESVASGNTTVTSDVAQQQQSSANFTFECEIPTADINGAEEPVCSSENLINSTAICNEVMSDPQTEPESIDTVLLENEELLKQERLNQTTPVEHTESTSSQKTNKASDFNDIPPLTPMTSTTYSICTNLITSTSMAAPTGLPVPPLVPMLPPKAISLSNVSTPANSTERGRIYVANNLMQAPNASPISQTPTSKTNNTKSLGKQHPKTPIAVSVMGGTSVRGRPFGSNRTGITKLRKQPLNENGAGVYLKCTVAGCAFRFKKSNTLDYHIKCHINESQPQSMACPECRAPFTNWNSLHTHLWRTHKIDMELYSCELCSFKTPIYSRLLNTHSKIHYDERNYKCDQCEKAFKNTKQLKNHRRWHRNHNKSTTSPSTKPEISMKADLPPSESSAAVQHSLSATTTSDATQVPVTVRNFYRCKDCEAVFSHQKTLREHLCKNAAAAVQCELCDRVLTSRSSIKLHMQLHEPSRRFKCNICDYSASDHNAFRRHKMTHDNNAKMYACVHCDYKSIQSVAYQKHVQQKHPQLADSIVYKCKICPFATINKSLFDIHQVKHENKNDNTEGADVAENVDAQKTTTAKTKIKVKSHLLLTTTADSTTELNELCVDAVANMVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192401;
90% Identity: iTF_01564125;
80% Identity: -