Basic Information

Insect: Bactrocera latifrons
Gene Symbol: RREB1
Assembly: GCA_001853355.1
Location: NW:1986619-2001200[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.014 0.76 9.9 2.1 1 21 300 320 300 322 0.95

2 14 0.00028 0.016 15.2 0.1 1 23 332 354 332 354 0.98

3 14 2.2e-05 0.0012 18.7 7.5 1 23 360 382 360 382 0.98

4 14 0.4 22 5.3 2.3 2 19 678 695 678 695 0.96

5 14 0.0013 0.074 13.0 0.2 2 23 711 733 710 733 0.93

6 14 0.0079 0.44 10.6 0.1 1 23 899 921 899 921 0.97

7 14 1.8e-05 0.001 18.9 1.2 1 23 931 953 931 953 0.99

8 14 0.00058 0.032 14.2 2.2 1 23 959 982 959 982 0.97

9 14 0.0028 0.16 12.0 2.0 1 23 1294 1317 1294 1317 0.95

10 14 8.1e-05 0.0045 16.9 0.3 2 23 1677 1698 1676 1698 0.97

11 14 0.14 7.6 6.7 6.3 1 23 1704 1727 1704 1727 0.97

12 14 2 1.1e+02 3.1 5.1 1 23 1844 1867 1844 1867 0.97

13 14 0.0079 0.44 10.6 0.5 3 23 1922 1942 1920 1942 0.96

14 14 0.0013 0.07 13.1 4.8 1 23 1948 1970 1948 1970 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.014	0.76	9.9	2.1	1	21	300	320	300	322	0.95
2	14	0.00028	0.016	15.2	0.1	1	23	332	354	332	354	0.98
3	14	2.2e-05	0.0012	18.7	7.5	1	23	360	382	360	382	0.98
4	14	0.4	22	5.3	2.3	2	19	678	695	678	695	0.96
5	14	0.0013	0.074	13.0	0.2	2	23	711	733	710	733	0.93
6	14	0.0079	0.44	10.6	0.1	1	23	899	921	899	921	0.97
7	14	1.8e-05	0.001	18.9	1.2	1	23	931	953	931	953	0.99
8	14	0.00058	0.032	14.2	2.2	1	23	959	982	959	982	0.97
9	14	0.0028	0.16	12.0	2.0	1	23	1294	1317	1294	1317	0.95
10	14	8.1e-05	0.0045	16.9	0.3	2	23	1677	1698	1676	1698	0.97
11	14	0.14	7.6	6.7	6.3	1	23	1704	1727	1704	1727	0.97
12	14	2	1.1e+02	3.1	5.1	1	23	1844	1867	1844	1867	0.97
13	14	0.0079	0.44	10.6	0.5	3	23	1922	1942	1920	1942	0.96
14	14	0.0013	0.07	13.1	4.8	1	23	1948	1970	1948	1970	0.99

Sequence Information

Coding Sequence: ATGCTCGCCACAGCAGCCGCCAGCACACAAGCAGCATTGGATGCCATACAAACGAGCGTCACCAAAATGGAGCGACGTGACTCAACGACTTCGGAATCATCGTTGGAGCACTTGGATTTGGGACGCACGCCAAAGAAGCTCAGCGCACACTCATCGGCCACATCGACACCGCATGCAAGCAtcaacagcaccagcagcaacaacagagCCAACGGCAATGATGTGCTTGCAAAAGATGCCAACAACACAAATGCCACAACAGCAACTGCTAGCTGTGGTGCCACCACCAAGACAGTGCTAGCCCATCAGCAGCGACATATCAACGACTCCGATGAGGCGAATGATTATGACGATGACGATGAGGAGTCGCCAGATGAACAGTGCCTTGGCAAGTCGAATACACACAATTCGCGATCACAGCGTCATCACAAGCGTCGCAGCACAGCGCCACGTCTAGACAAACGCACCAGCGTACATTTGGAATTCAATGCGGACGATCCGAATTCGCTGCGCAAGAAGTTTCGCTTTAATCGCAGCAACTCTGCGTCCGAACAAATGTCCAGCAATAATGAGTCTGGCTTCGTGGACGCCAGCTGTAGTAGTCATTACCTGAATGCCTCGGCAGTGTCATTGGCGgcggcagcagcggtggcagcgGCAGCCGCGACGACGACGTCAACATCAGGCACCACAGCTGCAATTAACATGACGCCAACACTGCATAGCTCAATCTCTGCGTCGGCATCGGCATCGGGTTCGGTCTCGGCGACAGGCTCGCACAGTTCGTCGTCGGCCGCTTCTTCGCCGCGTGGCTGTGGTGCCGGTTTGGCTGCTTCCTCCGCCTCGATGTCCAGTCCTGAATCGGGTATTGGTGATAGGGAACGTGAGGACATGAAGTTCGTATGCACCATTTGCGATGTGGTGTCGGCGACGCGACACGAATTCACAAATCACATACGCTGTCACAATTACGCCTCCGGGGATACGGAGAACTACACATGTGCTATTTGCTCCAAGGTGCTCTCGTCGGCCTCCTCACTGGATCGGCATGTGCTGGTGCACACAGGCGAACGACCATTCAATTGCAAATATTGTCACCTCACCTTCACCACCAACGGCAACATGCACCggcacatgcgcacacacaagCAGCATCAGCACAATCATCATCATCGGCGCAACTCGAATGGAACAAAGCAAAGCAGTCAtagttacaacaataacaacaataacaacaacaacaacaacaacaacgccggTATGCCCGCCAGCAGTGGCGGAATCGACGCTTTCGCCTCAGCCACCAACAATTATGAGCAATTAGGTAATGGCTTGATGGGTGAAGGCGTCAAACCAGCAACAGCATCAGCCGAGGCCTTAGCGTTGACGAACGACAGCAGCATGGCCGCCACTGCGCACGCTGGCGGTGACGCCGCCGCGACTATCGTTGCAGGTGTTAATGGTAAACGCTTACACAGTAGTGGCGTAGAAAGTTGCGAAAGTGACGGCGGTTGCTCAACAGACTCCTCATCAAGTGCCATCAGCCATAGCTCAAATAATaaccacagcaacaaaaacaataacagcgacaatattaacaacaatgccacaaataattacaataacaatatgcaTGCGAAGCGTATTCGTTTAGGTAACTTTAAGCGTAAAAGTAGTGAACAACATGACGAAGACAACGCGGACGCCGAAGCTGACGGCCTGACAATGATGACAGCGACGAAGCGACGCGTGAAGACCACCATAAACAACAATATAATCGGCGAGGATGTGGATGAGCTTGATGCGCGCATGGTCGCGCATAATAATGACAGCGTCATGATAACCAAAAAAGCCAGCGCATCCTCTTCCGCATCAGCCATATCGGCAGAAGAACGTGATGACGAAGATGAGGACGTCGAGCAGAAACCGTACTTCGCCTGTCCCGTCTGTCCGGTGTGCAATGCGGCTGACTTTGCCGATACACGCGCCTTGGACAACCACTTGGACAGCGAACACGCGGACATACCCGCCAAATGCCGACACTGCGAGGTGGTCTTTCGCACACACCGCCAATTAAGCTTGCATCCGTGTACGCAGCGCTTGCTGGGCAATCGTCCGATGCCGCTTGTGGAGTGCGTAAAATGTGGACAGAGCTTTGAGAATGCCGACGCTTTGGAGTTGCATGCGCGCGATTGTCATAGCCACGAGTTGGGGCATGCGCGGCGTAGTCGCAGCCTAAGCGATAGTTTCGTAGCAGCGCCTATGACGGATGCCGAAATTGAGGATAAGACAAACCAAATACGCAATAATTTCTTACGTCAACTGTATCTGCAAAGTCAGAAGCCTTTCTGCGCGCAAAGTTTGATCTCGCTGCCCTCGCCGCAGCACTCCGCACACGACGAAGTGGATTCGGCGAACGTAAGCAATACCGATATCAAAGTTGAAGCAGCCGACACTGAACCAACAGACCAATTGACAAGTAATTTACTTTCACAACAGTCGCACGACTCGAAGGATCTTGCCGATATACAATCGATACTCAATATGACTTCGTCGTCCTCAACATCCAATTTTCTGAAGAACTTCGAGCAATCGGTAAACACACCATCCAGCAATTATAGCATGGACAAGGACGAGGAGGAGGCGCAAGATGCCTTCACGTCGGAGTTTCGTAAAATGAAATTGCGTGGTGAGTTTCCATGCAAACTCTGTACGGCCGTCTTTCCGAACTTACGTGCGCTAAAGGGACACAATCGTGTGCATTTGAGCGCCGTTGGGCCGGCAGGTCCGTTCCGTTGCAACATGTGCCCTTACTCGATATGCGATAAGGCTGCGCTGGTGCGTCACATGCGTACACATAATGGCGATCGACCTTACGAATGTGCCGAGTGCAATTATGCCTTCACTACGAAGGCTAACTGTGAACGCCATTTGCGTAATAGGCATGCGAAGACTACACGCGACGAGGTCAAACGTGCTATTATATATCATCCATCTGAAGACTCGACCTGCGATGATCCCACCAAAAAGCTGCATATGTTCTCTTCGCCCGACTTCGATGACGATATGGAGTTGCAATATCAGCAACATCATCCCAAAGATCGCTCGACGCCAGTGTCGCACCTAAAGGAAATCTTAACCGCTGAAAGTCCACTTGCCAAACCGATTAAGATACAGGTTAAGAGTTTGGAGCAATTGTTGGACAAGTCAACCGGTTCGGTTGCAAGCTACAATGACTCCTTTGAAGAACGTACACCAGCACTGTCCAACTTGCAACACGGCGAGACAGCACCCATCGACTTGAGTATGGATGTTTTGGATCTTAGCAAGAAACCCACAGCAAAGCCCGTCGAAAAGGAGACCATTGCTGCGCCAGCGCCACCAGTAATAGAAAATGGCATTGATCCGGAAAAGAAGCTGGATCTATTTTCTTATGtgaaggaaaatttaaatatgccaaAGATGCTGGAACTCTGGAGTTTGTCCGCCCAATTCCCATTCATGCCCGATTTCGCGCCACTAATGAATCAGATGTTTGGCGGCAACGCTGCTGCTAATCCATTTCTACCACCCGGTTTGGACCTGAATAAAAGCATGCAAGCTTCGGCAAACATGACACCACCAATGTTACCGAATTTGAACTCCCTAATGGCCGACAAACTAAACACACATCCGCATACCACACCAGATCCCAATATAATGAATCAAATGTTGCCCACATCCATGATGACGCCACCTCCCCCGAATACCGGAATGAATATGCCGCATCACTCGCACATTCCACCCACGGTATTGCCGGGTGGTCCCGTCAAAATGGTGATAAAGAACGGCGTACTGATGCCCAAACAGAAGCAGCGTCGTTACCGCACCGAACGGCCCTTCGCCTGCGAGCATTGTTCCGCACGTTTTACGCTCCGCTCAAATATGGAGCGACACGTGAAGCAACAACATCCACAGTACTACGCACAACGTCACCGCACCGGCCACCACAGCATACGTGGACGTGGCGCCAGCAGCGCAACGACAATGAACAGTATTTCCCATTTACAAGCGGCAATTGCTCAAGCGCACAATAACGCCACTCAAGCACAAGGCAATGGACTGGGCGCCGCGCCGATATCGGAGCAAGTGAAATACGCCATACTGGCGCAGCAGCTGAAGGCGCGCAAGGACACCGACTTACTGCAACAGGCTCTGGCGCACGGCTCCAGCAGCATTGCAAATAGTCATCATATGTTGTTGAATGCTGCCGGCGCTGCCATCGGACCGCTGGGCCCTCCAAACGGTCTTCAGTTTCCATTCAACCATTTGGGTCAGCCTGTGAACATTAACGGCAACGCGGAAGATGATGAACCCAAATTGATTATTGATgaggatgatgatgatgacgtcGAAGAGATACTGGACGACAATGAAGATGACGAAGAGTTCCAAGTGTCGAACGAACACTTCGAACATATGCGCAAATTTCAAGTGCCAGCACCCGTCGTGGAGGAAGTAAAGACTGCACCTCCTGCTACCAATGAGTCAAACAATGAGACAGCCAAGAAAGTTGCAGAAACCATACTGGAACAGGCGAAGAAAACTGTTCAAAAACCAAATCAAAAGACCAGCAAACCCAACACAAACTTTGCCGCCAAACCCACACCTACTAAGTCGGCTGCACCAGCGGCCACACCGGCAGCACCTGCAGCGCCTGTTACACCAGCCAACACAATGAAGGCCATGATCGCACAAGCCGAGTCTGTGGGCAAGTTTCTGAAAGAGGTCGCCAGTTCACCCTTCAAAGATGAATCGCAAGATCTGGTACCGGTTGCTAAACTGGTGGACAATGCCACTAGCAATGCTGTTTCATTCAACAACTATTTCCGTCCCAGCGACGTAGCCAATCATATGGAACAAAGTGACGAAGAGGGGCTGGTGGCCTCGGGTAGCGCCAGCGAAAGCAATCACTCCGGCACTGAAGACGTAGCCGCACCAGCGGAGCCGAAAAAGAAATCAGCCTATAGTCTGGCGCCAAATCGTGTCTCATGCCCCTACTGCCAACGCATGTTCCCCTGGTCCAGCTCACTGCGTCGCCACATACTCACGCATACCGGCCAAAAACCATTCAAATGTTCGCACTGTCCACTGCTCTTCACCACCAAAAGCAATTGTGATCGACATTTGTTGCGCAAACATGGCGACGTTGAGTCAGCGGTGTCGGTCTATGTGCCAACCGAAGATGTCAACGAGCCAATACCAGTGCCAAAATCCGTCGAGGAGATCGAACAGCAACAGCGACAACGCGAAGAGGAGCAACGCAAACGCAAAGCTGAAGAGGTGAAATTGGAGCGCGAGCGTCGTGAGAAGAAACAACGCTTACAACAAGAGAaggaacaacaaaacaaactcTTCAAACAATTGGCTGTcgcacaactacaacaacagctcAATGTCTCAATGAGCGCGGCCGCCAATACGACCAGCAACGCCGAAGCTGATGCACGCGCCAAAGAGAATCTCTCACAGCTAAACGCCGACTTGCCATACAAATGTCATTTGTGTGAGAATTCTTTCGCCGAGCGCTTCAATTGTCTGGAGCACATCAAGAAGCAACATGCACCCGAGTTCACATTGCTACTCAGCAAAGGTGCAATCGTCAGCGATGCCGAAGCCAACCAGACGCAACTGCTCGAGGACGAGGAACGACGTGTGGGCGAAGAGGCGAACAACTTTGCATTGCTGCCGAAACTACCGGCCTACACCAATCGCAAAGTGATTTGCGCCTTCTGCGTGCGTCGCTTCTGGTCCACCGAGGACTTGCGCCGACATATGCGCACACACTCAGGCGAACGTCCCTTTCAATGCGAAATCTGTTTGCGCAAATTCACGCTGAAGCACAGCATGCTGCGACACATGAAAAAACACACAAGTCGCGGTCAAAATGGCGCCGCCGGCAGCGATGGTGCCTCGCCAATGGGTAACAGTGGCTCGGATTTTTCGGACGACGAACAAATACCGACACCAACGTCTACAACTAGAACTTCATCAGCCTGCACCAGCGCTGCTACGGCAACGACAACGTCACCGGTGACCACAGCAACAGCGGCAACACTGCGTTCACCAAAAATACAGGAGCTGCTGAGCAAAACCAACGAATGGCGCAGCGCTCACTTGGCTGGCGAACAAAAGGAGAATATTGCCGAAGAACAACCGAACGGTCTGCACAGCGATCTGATCGGCAATCTGTTGGGCATTAGCGATCAAGGTATACTCAATAAATTGCTGTCGTCGCCCGACGAAGCGGCCAAACTGTTGGGTGTGGAGAAGTAA
Protein Sequence: MLATAAASTQAALDAIQTSVTKMERRDSTTSESSLEHLDLGRTPKKLSAHSSATSTPHASINSTSSNNRANGNDVLAKDANNTNATTATASCGATTKTVLAHQQRHINDSDEANDYDDDDEESPDEQCLGKSNTHNSRSQRHHKRRSTAPRLDKRTSVHLEFNADDPNSLRKKFRFNRSNSASEQMSSNNESGFVDASCSSHYLNASAVSLAAAAAVAAAAATTTSTSGTTAAINMTPTLHSSISASASASGSVSATGSHSSSSAASSPRGCGAGLAASSASMSSPESGIGDREREDMKFVCTICDVVSATRHEFTNHIRCHNYASGDTENYTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKQSSHSYNNNNNNNNNNNNNAGMPASSGGIDAFASATNNYEQLGNGLMGEGVKPATASAEALALTNDSSMAATAHAGGDAAATIVAGVNGKRLHSSGVESCESDGGCSTDSSSSAISHSSNNNHSNKNNNSDNINNNATNNYNNNMHAKRIRLGNFKRKSSEQHDEDNADAEADGLTMMTATKRRVKTTINNNIIGEDVDELDARMVAHNNDSVMITKKASASSSASAISAEERDDEDEDVEQKPYFACPVCPVCNAADFADTRALDNHLDSEHADIPAKCRHCEVVFRTHRQLSLHPCTQRLLGNRPMPLVECVKCGQSFENADALELHARDCHSHELGHARRSRSLSDSFVAAPMTDAEIEDKTNQIRNNFLRQLYLQSQKPFCAQSLISLPSPQHSAHDEVDSANVSNTDIKVEAADTEPTDQLTSNLLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSMDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSTCDDPTKKLHMFSSPDFDDDMELQYQQHHPKDRSTPVSHLKEILTAESPLAKPIKIQVKSLEQLLDKSTGSVASYNDSFEERTPALSNLQHGETAPIDLSMDVLDLSKKPTAKPVEKETIAAPAPPVIENGIDPEKKLDLFSYVKENLNMPKMLELWSLSAQFPFMPDFAPLMNQMFGGNAAANPFLPPGLDLNKSMQASANMTPPMLPNLNSLMADKLNTHPHTTPDPNIMNQMLPTSMMTPPPPNTGMNMPHHSHIPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRTGHHSIRGRGASSATTMNSISHLQAAIAQAHNNATQAQGNGLGAAPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIANSHHMLLNAAGAAIGPLGPPNGLQFPFNHLGQPVNINGNAEDDEPKLIIDEDDDDDVEEILDDNEDDEEFQVSNEHFEHMRKFQVPAPVVEEVKTAPPATNESNNETAKKVAETILEQAKKTVQKPNQKTSKPNTNFAAKPTPTKSAAPAATPAAPAAPVTPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVAKLVDNATSNAVSFNNYFRPSDVANHMEQSDEEGLVASGSASESNHSGTEDVAAPAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEEQRKRKAEEVKLERERREKKQRLQQEKEQQNKLFKQLAVAQLQQQLNVSMSAAANTTSNAEADARAKENLSQLNADLPYKCHLCENSFAERFNCLEHIKKQHAPEFTLLLSKGAIVSDAEANQTQLLEDEERRVGEEANNFALLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHTSRGQNGAAGSDGASPMGNSGSDFSDDEQIPTPTSTTRTSSACTSAATATTTSPVTTATAATLRSPKIQELLSKTNEWRSAHLAGEQKENIAEEQPNGLHSDLIGNLLGISDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00190849; iTF_00193771; iTF_00192301; iTF_00193008; iTF_01563128; iTF_01563987;
90% Identity: iTF_00193771;
80% Identity: -