Basic Information

Insect: Bactrocera minax
Gene Symbol: RREB1
Assembly: None
Location: JAPVRH010005587.1:31185-38049[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.017 1.3 9.9 2.1 1 21 301 321 301 323 0.95

2 13 0.00035 0.027 15.2 0.1 1 23 333 355 333 355 0.98

3 13 2.8e-05 0.0021 18.7 7.5 1 23 361 383 361 383 0.98

4 13 1.3 1e+02 3.9 5.0 2 21 672 691 672 692 0.92

5 13 0.0099 0.76 10.6 0.1 1 23 893 915 893 915 0.97

6 13 2.3e-05 0.0018 18.9 1.2 1 23 925 947 925 947 0.99

7 13 0.00073 0.056 14.2 2.2 1 23 953 976 953 976 0.97

8 13 0.0035 0.27 12.1 2.0 1 23 1287 1310 1287 1310 0.95

9 13 0.0001 0.0079 16.9 0.3 2 23 1671 1692 1670 1692 0.97

10 13 0.17 13 6.7 6.3 1 23 1698 1721 1698 1721 0.97

11 13 2.5 1.9e+02 3.1 5.1 1 23 1838 1861 1838 1861 0.97

12 13 0.01 0.77 10.6 0.5 3 23 1916 1936 1914 1936 0.96

13 13 0.0016 0.12 13.1 4.8 1 23 1942 1964 1942 1964 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.017	1.3	9.9	2.1	1	21	301	321	301	323	0.95
2	13	0.00035	0.027	15.2	0.1	1	23	333	355	333	355	0.98
3	13	2.8e-05	0.0021	18.7	7.5	1	23	361	383	361	383	0.98
4	13	1.3	1e+02	3.9	5.0	2	21	672	691	672	692	0.92
5	13	0.0099	0.76	10.6	0.1	1	23	893	915	893	915	0.97
6	13	2.3e-05	0.0018	18.9	1.2	1	23	925	947	925	947	0.99
7	13	0.00073	0.056	14.2	2.2	1	23	953	976	953	976	0.97
8	13	0.0035	0.27	12.1	2.0	1	23	1287	1310	1287	1310	0.95
9	13	0.0001	0.0079	16.9	0.3	2	23	1671	1692	1670	1692	0.97
10	13	0.17	13	6.7	6.3	1	23	1698	1721	1698	1721	0.97
11	13	2.5	1.9e+02	3.1	5.1	1	23	1838	1861	1838	1861	0.97
12	13	0.01	0.77	10.6	0.5	3	23	1916	1936	1914	1936	0.96
13	13	0.0016	0.12	13.1	4.8	1	23	1942	1964	1942	1964	0.99

Sequence Information

Coding Sequence: ATGCTCGCCACAGCAGCCGCCAGCACACAACAAGCATTGGATGCCATTCAAACGAACGTCACAAAGATGGAGCGACGTGGCTCAACGACGTCGGAATCATCGTTGGAACATTTGGATTTGGGACGTACACCGAAGAAGCTAAGCTCACACTCATCGGCCACATCTACGCCGCTTATAATCACTAACAGcagcaacacaaacaacaacagagcTAACAACAAGGATGTGCATACAAAAGATGTCACCAACACAAATGCCACAACTGCAACTGGTGTTGGTGGTGCCACCAACGCATTACTACCTCATCAGCAAGGTCATATCCACGACTCCGATGAGGCGAATGATTACGACTATGACGATGAGGAGTCTCCCGACGAACAGTGCGGTGGCAAACAGAACGCGCTGAATTCGAGGTCACAGCGTCATCATAAGCGACGCAGCATAGCGCCACGTCTAGACAAACGCACCAGCGTACATTTGGAATTAAATGCGGACGATCCCAATTCGCTGCGCAAGAAGTTTCGCTTTAATCGCAGCAACTCTGCCTCCGAACAAATGTCCAGCAATAATGAGTCTGGCTTCGTGGACGCCAGTTGTAGTAGTCATTACCTGAATGCATCGGCCGTGTCATTGGCTGCGGCAGCAGCGGTGGCAGCTGCGGCGGCGACGGCGACGACATCATGCACTGCAACGCCAATTAGCATGACGCCTGCACTGCATAGCTCAATCTCTACATCGGCGTCTGCATCTGCCTCGGCTTCGGTCTCGGCGACAGGCTCACACAGTTCGTCGTCGGCCGCCTCTTCGCCGCGTGGCTGTGGCGTCGGTTTGGCTGCCTCATCCGCCTCAGTTTCCAGTCCCGAATCGGGTATTGGCGATAGGGAACGCGAGGACATGAAGTTCGTGTGTACCATCTGCGATGTGGTGTCGGCAACTCGACACGAATTCACAAATCATATACGCTGTCACAATTACGCCTCTGGGGACACGGAGAACTACACATGTGCTATTTGCTCCAAGGTGCTCTCCTCGGCCTCCTCACTGGATCGGCATGTGTTGGTGCACACAGGCGAACGACCAttcaattgcaaatattgtCACCTCACCTTCACCACCAACGGCAACATGCACCGgcacatgcgcacacacaagCAGCATCAGCATAATCATCATCATCGCCGCAACTCGAATGGAACAAAGCAAAGCACTCATAGTCACATCAACAACAATGTCGGCGGTATGCCTGTAAGCAGTAGCGGAACCGACGCTTTCGCCTCAGCCACCAACACTTATGCGCAATTAAGTAATGGCTTGATCGGTGAAGGTGTCAAAACATCAACAGCATCAGCCGAGGCTTTAACGACGACCGATGCTAGTACTGTCGCCACTGCGCAAATTGGCGGTGACGCTGCCATCGGTGCAGGTGTTAATGCTAAACGCTTACACAGTAGCGGCGTAGAAAGTTGCGAAAGTGACGGCGGTTGCTCAACAGACTCCTCATCAAGTGCCATCAGCCATAGCTCAAATAATAAccatagcaacaaaaacaataccagcgataatatcaacaacaatgccacaaatcattacaataacaattttaacgTGAAGCGTAATCGTTTAGGTAATTTTAAGCGCAAGAGTAGTGAACAACATGACGAAGGCAACGCGGACGCCGACGTTGACGGCGACCTGACAACGATGACAACGGCGAAGCGACGCGTGAAGAccacaataaacaacaatataatCGGCGAGGATGTAGATGAAGTTGATGCGCGCATGGTCGCTCATAATAATGACAGCACGATGGCAACCGCAAAAACAAGCGCATCCTCTTCTGCATCGGCCACGTCGGCGGAGGAACGTGAAGTCGGCCACGATGACGATGAAGATGCCGTGCAGAAGCCGTACTTCGCCTGCCCCGTCTGTCCGGTGTGCAATGCGGGTGACTTTGCCGATACGCGCGCCTTGGATAATCATTTGGACAGCGAGCACTCGGATATACCGGCCAAGTGCCGTCACTGCGAGGTGGTCTTTCGCACACACCGCCAGCTGAGCTTGCATTCGTGCACGCAGCGTTTGCTCGGCAGCCGTCAGATGCCGCTGGTGGAGTGTGTAAGATGTTGTCGGAGCTTTGAGAATGGCAACGCTTTGGAATTGCATGCGCGCGACTGCGACACCCACAATGTGAGGCATGCGCGGCGTAGTCGCAGCCTGAGCGATAGTTTTGCAGTAGCGCCTTTGACGGAAGCCGAAATTGAGGATAAGACCAACCAAATACGCAATAACTTCTTGCGACAGTTGTATCTGCAAAGTCAGAAGCCTTTCTGCGCGCAGAGTTTAATCTCGCTGCCCTCGCCGCAGCACTCCGCACCCGATGAGGTAGATTCGATGAACGTAAGCAACACCGATATCAAAGTCGAAACAGCCGACACGGAGCCGGCAGATCAATTAACAAGCAATTTACTGTCACAACAGTCGCATGACTCAAAAGATTTGGCAGATATACAGTCGATACTCAATATGACTTCGTCGTCGTCAACATCCAATTTTCTGAAGAACTTCGAACAATCGGTGAACACACCATCCAGCAATTACAGCTTGGACAAAGACGAAGAGGAGGCGCAAGATGCCTTCACATCTGAGTttcgtaaaatgaaattgcgcGGGGAGTTTCCATGCAAGCTCTGCACGGCCGTCTTTCCGAACTTGCGTGCGCTGAAGGGTCATAATCGTGTGCATTTGAGCGCCGTTGGGCCGGCTGGCCCGTTCCGTTGCAACATGTGCCCTTACTCGATATGCGATAAGGCTGCGCTGGTGCGTCACATGCGTACACACAATGGCGATCGGCCATATGAATGTGCCGAGTGCAATTATGCCTTCACTACGAAGGCCAATTGCGAACGCCACTTGCGTAATAGACACGCGAAGACTACACGCGACGAGGTCAAACGTGCCATTATATATCATCCATCCGAAGACTCGACTTGCGATGATCCCGTCAAGAAGTTGCATATGTTCTCTTCGCCCGATTTCGATGACGATATGGAGTTGCAATACCAGCAACATCACCCGAAAGATCGCTCGACGCCCGTGTCGCACCTTAAGGAAATCTTAACCGCAGAGAGTCCCGCTGCCAAACCGATAAAGATACAGGTTAAGAGCTTAGAACAATTGTTGGACAAGTCAACGGGGTCGGTTGGTAGCTTCAACGACTCATTTGAGGATCGTACACCAGCGCCGTCCAGTTTGCAACATGGCGATACGGCACCCATCGATTTGAGTATGGATGTTTTGGATCTTAGCAAAAAAACCACAACTAAGCCAATAGAGGAGACCATTGTTACGCCTACGCCGCTGGTACCGGAAAATGGAATTGATCCGGAGAAGAAGCtggatttattttcttatgtgAAGGAGAATTTAAACATGCCAAAAATGCTGGAGCTCTGGAGTTTGTCTACACAATTCCCGTTCATGCCCGACTTCGCGCCACTAATGAACCAAATGTTTGGCGGCAACGCTGCCGCTAATCCATTTCTACCACCCGGCCTAGATCTAAATAAAAGCATGCAAGCACCGACAAATATGACACCACCAATGTTACCGAATTTGAACTCTCTAATGGCCGACAAGCTaagcacacacccacataatACACCAGATcccaatataataaatcaaatgttgCCCACGTCCATGATGACGCCACCTCCTCCGAATACCGGCATGAATATGCCGCGTCACTCGCACATTCCGCCAACGGTATTGCCAGGTGGACCCGTCAAAATGGTGATAAAGAACGGCGTACTGATGCCCAAGCAGAAGCAGCGTCGTTATCGCACCGAGCGACCCTTTGCATGCGAGCACTGCTCCGCGCGTTTCACACTTCGCTCAAATATGGAGCGACACGTGAAACAACAACATCCACAGTATTACGCACAACGTCACCGCAGCGGCCACCACAGCATACGCGGTCGTGGCGCCAGCAGCGCAACGACAATTCACAGCATTTCCCATTTACAAGCGGCAATAGCTCAAGCGCACAATAACGCCACTCAAGCACAAGGCAACGGCCTGACCTCTTCACCTATATCGGAGCAGGTGAAGTACGCCATACTGGCGCAGCAGCTGAAGGCGCGCAAGGACACTGACCTGCTGCAACAGGCACTAGCGCACGGCTCAAGTAGCATAGCAAAGAGCCATCATATGCTACTGAATGCTGCCGGAGCTGCACTCGGACCGCTGGGCCCCCCAAACGGTCTCCAATTCCCATTCAACCATTTGGGTCACCCCACAAACATTAACGGCACCGCTGAAGATGATGAACCCAAATTGATTATCGACGAGGATGAAGATGATGACGTCGAAGAAATACTGGACGACAACGAAGAAGACGAGGAGCTGCAGTTGTCAAATGAACACTTCGGGAACACGCGCCAATTTCAAACGCCAGCACCCGTCGTGGAGGAAGTAAAAACTGCACCCTCAATAAATAGTGAGTCAACCAATGAGACAGCTAAGAAGGTTGCAGAAACCATACTGGAACAGGCGAAGAAAACaggtcaaaaacaaaatctacTAGCAACTAGCAAACCCAATTCAACCTTTGTCGCCAAGCCCACACCGACTAAAACCGTTGCACCAGTGTCAACACCGGCAGCACCTGCGGCCCCTGTCACCCCCGCCAACACAATGAAAGCCATGATCGCACAAGCTGAGTCGGTGGGCAAGTTTCTGAAAGAGGTAGCCAGTTCCCCCTTCAAAGATGAATCACAAGATCTGGTGCCGGTTGCCAAACTGGTAGACAATGCAACCAGCAACGCCGTTTCGttcaacaattattttcgTCCCAGCGATGTAGCCAATCATATGGAACAAAGTGACGAAGAAGGTCTGGTGGCCTCGGGCAGCGCCAGCGAAAGCAATCACTCCGGCACCGAAGACGTAGCCGCACCAGCCGAGCCGAAAAAGAAATCAGCCTATAGTCTGGCGCCAAACCGTGTCTCTTGCCCCTACTGCCAACGCATGTTCCCCTGGTCCAGCTCACTGCGACGCcatatactcacacacaccGGCCAAAAACCATTCAAATGTTCGCACTGTCCACTGCTCTTCACCACCAAAAGCAATTGCGATCGACATTTGCTGCGCAAACATGGCGACATAGAGTCAGCAGTGTCGGTTTATGTGCCAACCGAAGATGTCAACGAGCCAATACCAGTGCCAAAATCCGTTGAGGAGATCGAACAACAGCAGCGACAGCGCGAAGAGGAAGAGCGCAAGCGCAAAGCTGAAGAGGCGAAATTGGAGCGCGAGCGCCGGGAGAAGGAACAGCGCTTACAGCAGGAAAAggagcaacaaaataaactattCAAACAATTGGCTGTCgcacaactgcaacaacagctCAATGCCTCAATGAGCGCTGCAGCCAATGCGACCAGCAGCGCCGAGGCTGATGCACGAGCCAAAGAGAATCTCTCACAGCTCAACGCCGATTTGCCATATAAGTGTCATTTGTGTGAAAACTCTTTTGCCGAGCGCTTCAATTGTCTGGAGCATATCAAGAAGCAGCATGCCCCCGAGTTCACATTGCTACTAAGCAAGGGTGCAATTGTCAGCGATGCCGAAGCCAACCAGACACAACTGCTCGAGGAGGAGGAACGACGTGCAGGCGAAGAGGTCAACAACTTTGCACTGCTACCGAAACTACCGGCCTACACCAACCGCAAAGTCATTTGCGCCTTCTGCGTGCGTCGCTTCTGGTCCACCGAGGACTTGCGCCgacacatgcgcacacattCGGGTGAACGTCCCTTTCAATGCGAGATCTGTTTGCGCAAATTCACGCTGAAGCACAGCATGTTGCGACACATGAAAAAGCACACAAGTCGCGGCCAAAATGGCGCAGCTAGCGGCGATGGCGCCTCTGCAATGGGCAATAGTGGCTCGGACTTCTCGGACGATGAACAAATGCCGACACCAACATCTACGTccgctacaacaacgacagtgACAACAGCGATATCTGCAACGCAGCGTTCACCCAAAATACAGGAGCTGCTGAGCAAAACCAACGAATGGCGCAGCACTCACTTGGGCGGTGAACAAAAGGAGAATATAGCCGAAGAACAACCGAATGGACTACACAGCGATCTGATCGGTAATCTCTTGGGCATCAGTGATCAAGGTATTCTCAATAAATTACTCTCGTCTCCCGACGAAGCGGCTAAACTGTTGGGCGTAGAGAAGTAA
Protein Sequence: MLATAAASTQQALDAIQTNVTKMERRGSTTSESSLEHLDLGRTPKKLSSHSSATSTPLIITNSSNTNNNRANNKDVHTKDVTNTNATTATGVGGATNALLPHQQGHIHDSDEANDYDYDDEESPDEQCGGKQNALNSRSQRHHKRRSIAPRLDKRTSVHLELNADDPNSLRKKFRFNRSNSASEQMSSNNESGFVDASCSSHYLNASAVSLAAAAAVAAAAATATTSCTATPISMTPALHSSISTSASASASASVSATGSHSSSSAASSPRGCGVGLAASSASVSSPESGIGDREREDMKFVCTICDVVSATRHEFTNHIRCHNYASGDTENYTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKQSTHSHINNNVGGMPVSSSGTDAFASATNTYAQLSNGLIGEGVKTSTASAEALTTTDASTVATAQIGGDAAIGAGVNAKRLHSSGVESCESDGGCSTDSSSSAISHSSNNNHSNKNNTSDNINNNATNHYNNNFNVKRNRLGNFKRKSSEQHDEGNADADVDGDLTTMTTAKRRVKTTINNNIIGEDVDEVDARMVAHNNDSTMATAKTSASSSASATSAEEREVGHDDDEDAVQKPYFACPVCPVCNAGDFADTRALDNHLDSEHSDIPAKCRHCEVVFRTHRQLSLHSCTQRLLGSRQMPLVECVRCCRSFENGNALELHARDCDTHNVRHARRSRSLSDSFAVAPLTEAEIEDKTNQIRNNFLRQLYLQSQKPFCAQSLISLPSPQHSAPDEVDSMNVSNTDIKVETADTEPADQLTSNLLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSTCDDPVKKLHMFSSPDFDDDMELQYQQHHPKDRSTPVSHLKEILTAESPAAKPIKIQVKSLEQLLDKSTGSVGSFNDSFEDRTPAPSSLQHGDTAPIDLSMDVLDLSKKTTTKPIEETIVTPTPLVPENGIDPEKKLDLFSYVKENLNMPKMLELWSLSTQFPFMPDFAPLMNQMFGGNAAANPFLPPGLDLNKSMQAPTNMTPPMLPNLNSLMADKLSTHPHNTPDPNIINQMLPTSMMTPPPPNTGMNMPRHSHIPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRSGHHSIRGRGASSATTIHSISHLQAAIAQAHNNATQAQGNGLTSSPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIAKSHHMLLNAAGAALGPLGPPNGLQFPFNHLGHPTNINGTAEDDEPKLIIDEDEDDDVEEILDDNEEDEELQLSNEHFGNTRQFQTPAPVVEEVKTAPSINSESTNETAKKVAETILEQAKKTGQKQNLLATSKPNSTFVAKPTPTKTVAPVSTPAAPAAPVTPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVAKLVDNATSNAVSFNNYFRPSDVANHMEQSDEEGLVASGSASESNHSGTEDVAAPAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDIESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEEERKRKAEEAKLERERREKEQRLQQEKEQQNKLFKQLAVAQLQQQLNASMSAAANATSSAEADARAKENLSQLNADLPYKCHLCENSFAERFNCLEHIKKQHAPEFTLLLSKGAIVSDAEANQTQLLEEEERRAGEEVNNFALLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHTSRGQNGAASGDGASAMGNSGSDFSDDEQMPTPTSTSATTTTVTTAISATQRSPKIQELLSKTNEWRSTHLGGEQKENIAEEQPNGLHSDLIGNLLGISDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191533;
90% Identity: iTF_00193771;
80% Identity: -