Basic Information

Insect: Bactrocera dorsalis
Gene Symbol: RREB1
Assembly: GCA_000789215.2
Location: NW:2842220-2858031[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.013 0.75 9.9 2.1 1 21 301 321 301 323 0.95

2 14 0.00027 0.016 15.2 0.1 1 23 333 355 333 355 0.98

3 14 2.1e-05 0.0012 18.7 7.5 1 23 361 383 361 383 0.98

4 14 0.39 22 5.3 2.3 2 19 673 690 673 690 0.96

5 14 0.0012 0.07 13.1 0.2 2 23 706 728 705 728 0.93

6 14 0.0077 0.43 10.6 0.1 1 23 894 916 894 916 0.97

7 14 1.8e-05 0.001 18.9 1.2 1 23 926 948 926 948 0.99

8 14 0.00056 0.032 14.2 2.2 1 23 954 977 954 977 0.97

9 14 0.0027 0.15 12.0 2.0 1 23 1289 1312 1289 1312 0.95

10 14 7.9e-05 0.0045 16.9 0.3 2 23 1672 1693 1671 1693 0.97

11 14 0.13 7.5 6.7 6.3 1 23 1699 1722 1699 1722 0.97

12 14 1.9 1.1e+02 3.1 5.1 1 23 1839 1862 1839 1862 0.97

13 14 0.0077 0.44 10.6 0.5 3 23 1917 1937 1915 1937 0.96

14 14 0.0012 0.069 13.1 4.8 1 23 1943 1965 1943 1965 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.013	0.75	9.9	2.1	1	21	301	321	301	323	0.95
2	14	0.00027	0.016	15.2	0.1	1	23	333	355	333	355	0.98
3	14	2.1e-05	0.0012	18.7	7.5	1	23	361	383	361	383	0.98
4	14	0.39	22	5.3	2.3	2	19	673	690	673	690	0.96
5	14	0.0012	0.07	13.1	0.2	2	23	706	728	705	728	0.93
6	14	0.0077	0.43	10.6	0.1	1	23	894	916	894	916	0.97
7	14	1.8e-05	0.001	18.9	1.2	1	23	926	948	926	948	0.99
8	14	0.00056	0.032	14.2	2.2	1	23	954	977	954	977	0.97
9	14	0.0027	0.15	12.0	2.0	1	23	1289	1312	1289	1312	0.95
10	14	7.9e-05	0.0045	16.9	0.3	2	23	1672	1693	1671	1693	0.97
11	14	0.13	7.5	6.7	6.3	1	23	1699	1722	1699	1722	0.97
12	14	1.9	1.1e+02	3.1	5.1	1	23	1839	1862	1839	1862	0.97
13	14	0.0077	0.44	10.6	0.5	3	23	1917	1937	1915	1937	0.96
14	14	0.0012	0.069	13.1	4.8	1	23	1943	1965	1943	1965	0.99

Sequence Information

Coding Sequence: ATGCTCGCCACAGCAGCCGCCAGCACACAAGCAGCATTGGATGCCATACAAACGAGCGTCACCAAAATGGAGCGACGTGACTCAACGACTTCGGAATCATCGTTGGAGCACTTGGATCTGGGACGCACGCCAAAGAAGCTCAGCGCACACTCATCGGCCACATCGACGCCGCATACAAATACCaacagcaccagcagcagcaacaacagagcAAACGGCAACGATGTCCTTGCAAAAGATGCCAACAACACAAATGCCACACCAGTAACTGTTGGCTGTGGTGCCACCACCAAGCCCGTGCTACCCCATCAGCAGCGACATATCAACGACTCCGATGAGGCGAATGAttatgacgatgacgatgaggaGTCGCCCGACGAACAGTGCCTTGGCAAGTCGAATGCACACAATTCACGATCACAGCGTCATCACAAGCGTCGCAGCACAGCGCCACGTCTAGACAAACGCACCAGCGTACATTTGGAATTCAATGCGGACGATCCGAATTCGCTGCGCAAGAAGTTTCGCTTTAATCGTAGCAATTCTGTGTCCGAACAAATGTCGAGCAATAATGAGTCTGGCTTTGTGGACGCCAGCTGTAGTAGTCATTACCTGAATGCCTCGGCAGTGTCTttggcggcggcagcagcggtggcagcgGCAGCCGCGACGACGACGTCGACAACAGGCACCACAGCTGCAATTAACATGACGCCAACAGTGCATAGCTCAATCTCTGCGTCGGCATCGGCATCGGGTTCGGTCTCGGCGACAGGCTCGCACAGTTCGTCGTCGGCCGCTTCTTCGCCGCGTGGCTGTGGCGCCGGTTTGGCTACATCCTCCGCCTCGGTGTCGAGCCCCGAATCGGGTATTGGCGATAGGGAACGCGAGGACATGAAGTTCGTGTGCACCATTTGCGATGTGGTTTCGGCGACGCGTCACGAGTTCACAAATCACATACGCTGTCACAATTACGCCTCCGGGGATACGGAGAACTACACATGTGCTATTTGCTCCAAGGTGCTCTCGTCGGCCTCCTCACTGGATCGGCATGTGCTGGTGCACACGGGCGAACGACCATTCAATTGCAAATATTGTCACCTCACCTTCACCACCAACGGCAACATGCACCggcacatgcgcacacacaagCAGCATCAGCACAATCATCATCATCGCCGCAACTCGAATGGAACAAAGCAAAGCAGTCATagtcacaacaataacaacaacagtgccgCCGGTATGCCCGCCAGCAGTGGCGGAACCGACGCTTTCGCCTCAGCCACCAACAATTATGCGCAATTAGGTAATGGCTTGATTGGTGAAGGCGtcaaaacagcaacagcatcagcCGAAGTCTTAGCGTTGACGAACGACGGCAGTACGGCCGCCACAGCGCAAGCTGGTGGTGACGCCGTCGCGACCATTGGTGCAGGTGTTAATGGTAAACGCTTACACAGTAGTGGCGTAGAAAGTTGCGAAAGTGACGGCGGTTGCTCAACAGACTCCTCATCAAGTGCCATCAGCCATAGCTCAAATAATAAccatagcaacaaaaacaataacagcgacaatattaacaacaatgccacaaataattacaataacaatatgaacGCGAAGCGTAATCGTTTAGGTAACTTTAAGCGTAAAAGTAGTGAACAACATGACGAAGACAACGCGGACGCCGAAGCTGACGGCCTGACAATGATGACAGCGACGAAACGACGCGTGAAGACCAccataaacaacaacataatcgGTGAGGATGTGGATGAGCTTGATGCGCGCATGGTCGCGCATAATAATGACAGCGCCATGGTAAACACAAAAGCCAGCGCATCCTCTTCCGCATCGGCCATGTCGGCGGATGAACGtgatgacgatgatgaggaCGTCGAGCAGAAGCCATACTTCGCCTGCCCAATCTGTCCGGTGTGCAATGCGGCTGACTTTGCCGATACACGCGCCTTGGACAACCACTTGGACAGCGAACACGCGGACATACCCGCCAAGTGTCGACACTGCGAGGTGGTCTTTCGCACACACCGGCAACTGAGCTTGCATCCGTGCACGCAGCGCTTGCTGGGCAGTCGTCCGATGCCGCTGGTGGAGTGCGTGAAATGTGGTCAGAGCTTTGAGACTGCCGACGCTTTGGAGCTGCATGCGCGCGATTGCCATACCCACGAGTTGAGGCATGCGCGTCGTAGTCGCAGCCTGAGCGATAGTTTCGTAGCAGCGCCTCTGACGGAAGCCGAAATTGAGGATAAGACAAACCAAATACGCAACAATTTCTTACGTCAGCTGTATCTGCAAAGTCAGAAGCCTTTCTGCGCGCAGAGTTTGATCTCGCTGCCGTCGCCGCAGCACTCCGCACACGACGAAGTGGATTCGGCGAACATGAGCAATACCGATATCAAAGTTGAAGCAGCCGACACTGAGCCAACAGACCAATTGACAAGTAATTTACTTTCACAACAGTCGCACGACTCGAAGGATCTTGCCGATATACAATCGATACTCAATATGACTTCATCGTCCTCAACATCCAATTTTCTGAAGAACTTCGAGCAATCGGTGAACACACCATCCAGCAATTATAGCATGGACAAGGACGAGGAGGAAGCGCAAGATGCCTTCACGTCGGAGTTTCGTAAAATGAAATTGCGTGGTGAGTTTCCATGCAAGCTCTGTACTGCCGTCTTCCCGAACTTACGTGCGCTAAAGGGACACAATCGTGTGCATTTGAGCGCCGTGGGGCCGGCAGGACCGTTCCGTTGTAACATGTGCCCTTACTCGATATGCGATAAGGCTGCGCTGGTGCGTCACATGCGTACACATAATGGCGATCGGCCTTATGAATGTGCCGAGTGCAATTATGCCTTCACTACGAAGGCTAACTGCGAACGCCATTTGCGCAATAGGCATGCGAAGACTACACGCGACGAGGTCAAACGTGCCATTATTTACCATCCATCCGAAGACTCGACCTGCGATGATCCCGCCAAAAAACTGCATATGTTCTCGTCGCCCGACTTCGATGACGATATGGAGTTGCAATATCAGCAACATCATCCCAAAGATCGCTCGACGCCCGTATCGCACCTTAAGGAAATCTTAACCGCCGAAAGTCCACTTGCCAAACCGATCAAGATACAGGTTAAGAGTTTGGAGCAATTGTTGGACAAGTCAACCGGTTCAGTTGGCAGCtacaatgactcgttcgaagaACGTACACCAGCGCCGTCCAGCCTTCAACACAACGAGACAGCACCCATCGACTTGAGTATGGATGTTTTGGACCTTAGCAAGAAACCCACAGCTAAGCCCGTCGAAAAGGAGACCATTGCAGCGCCAGCCCTACCAGTAACGGAAAATGGCATTGATCCGGAAAAGAAGCTGGATCTCTTTTCGTatgtgaaagaaaatttaaacatgCCAAAAATGCTGGAACTCTGGAGTTTGTCCGCACAATTCCCATTCATGCCCGACTTCGCGCCACTAATGAATCAGATGTTTGGCGGCAACGCTGCCGCTAATCCATTTCTACCACCCGGTCTGGACCTGAATAAAAGCATGCAAGCTTCGGCGAACATGACACCACCAATGTTACCGAATTTGAACTCTCTAATGGCCGACAAACTAAACACACATCCGCATACCACACCAGATCCCAATATAATGAATCAAATGTTGCCCACATCCATGATGACGCCACCTCCACCAAATACCGGAATGAGTATGCCGCGTCACTCGCACATTCCACCCACGGTATTGCCAGGTGGCCCCGTCAAAATGGTGATAAAGAACGGCGTACTGATGCCCAAGCAGAAGCAACGTCGTTACCGCACCGAACGGCCCTTCGCCTGTGAGCATTGCTCCGCGCGTTTTACGCTCCGCTCAAATATGGAGCGACACGTGAAGCAACAACACCCACAGTACTACGCACAACGTCACCGCACCGGCCACCACAGCATGCGTGGACGTGGCGCCACCAGTGCAACGACAATAAACAGCATTTCCCATTTACAAGCGGCAATTGCTCAAGCGCACAATAACGCCACTCAAGCACAAGGCAATGGACTGGGCGCCGCGCCGATATCGGAACAAGTGAAATACGCCATACTGGCGCAGCAGCTGAAGGCGCGCAAGGACACCGACTTGCTGCAACAGGCGCTGGCGCACGGCTCCAGTAGCATTGCAAATAGTCATCATATGTTGCTGAATGCTGCCGGCGCTGCTATCGGACCGCTAGGTCCACCAAACGGTCTCCAGTTCCCATTCAACCATTTGGGACAGCCCGTAAACATTAACGGCAACGCAGAAGACGATGAGCCCAAATTGATTATTGATGAGGATGAAGATGACGACGTCGAGGAGATACTGGACGACAATGAAGAGGACGAAGAGTTCCAAGAGTCGAACGAACACTTCGAACATGTGCGCAAATTTCAAGCGCCAGCACCTGTCGTGGAGGAAGTAAAGACTGCACCTCCAGCTACCAATGAGTCAAACAATGAGACAGCCAAGAAAGTTGCAGAAACCATACTGGAACAGGCGAAGAAAACTgttcaaaaaacaaatcaaacgACCAGCAAATCCAACGCAAACTTTACCGCCAAACCCACACCTACTAAGTCCGTTGCACCAGCGACCACACCGGCAGCACCTGCGGCGCCTGTCACACCAGCCAACACAATGAAAGCCATGATCGCACAAGCCGAGTCGGTGGGCAAATTTCTGAAAGAGGTCGCCAGTTCACCGTTCAAAGATGAATCGCAAGATCTGGTGCCGGTTGCCAAACTGGTGGACAATGCCACCAGCAACGCCGTGTCATTCAACAACTATTTCCGTCCCAGCGATGTAGCCAATCACATGGAACAAAGTGACGAAGAGGGGCTGGTGGCCTCAGGTAGCGCCAGCGAAAGCAACCACTCCGGCACCGAAGACGTAGCCGCACCAGCCGAGCCGAAAAAGAAATCAGCCTATAGTCTGGCGCCAAATCGTGTCTCATGCCCCTACTGCCAACGCATGTTCCCCTGGTCCAGCTCACTGCGACGCCACATACTCACGCATACCGGCCAAAAACCCTTCAAATGTTCACACTGTCCACTGCTCTTCACCACCAAAAGCAATTGTGATCGACATTTGTTGCGCAAACATGGCGACGTTGAGTCAGCGGTGTCGGTCTATGTGCCAACCGAAGATGTCAACGAGCCGATACCAGTGCCAAAATCCGTCGAGGAGATcgaacagcagcagcgacaacgCGAAGAGGAGCAACGCAAACGCAAAGCTGAAGAGGTGAAATTGGAGCGCGAACGTCGTGAGAAGGAGCAACGCTTACAGCAGGAGAAGGAACAGCAAAACAAACTCTTCAAACAATTGGCTGTCGcccaactgcaacaacagctcAATGTCTCAATGAGCGCGGCCGCTAACGCGAGCAGCAACGCCGAAGCTGATGCACGCGCCAAAGAGAATCTCTCACAGCTCAACGCCGACTTGCCATACAAATGTCATTTGTGTGAGAACTCTTTCGCCGAACGTTTTAATTGTCTGGAGCACATCAAGAAGCAACATGCGCCCGAATTCACATTGCTACTCAGCAAAGGCGCAATTGTCAGCGATGCCGAAGCCAACCAGACGCAACTGCTCGAGGACGAGGAACGACGTGTGGGCGAAGAGGCGAACAACTTCGCTCTCCTACCGAAACTACCGGCCTACACCAATCGCAAAGTGATTTGCGCCTTCTGTGTGCGTCGCTTCTGGTCCACCGAGGACTTGCGCCGTCACATGCGCACACACTCGGGCGAACGTCCCTTTCAATGCGAAATCTGTTTGCGCAAATTCACGCTCAAACACAGCATGCTGCGACACATGAAAAAGCACACTAGTCGTGGCCAAAATGGCGCCGCCGGCAGCGATGGTGCCTCGCCAATGGGTAACAGTGGCTCCGACTTTTCGGACGACGAACAAATGCCGACACCAACGTCTACAACGACAACTGCATCCGCCTGCACCAACATCGCtacggcaacaacaacgtcgCCGGCGACCacagcaacagcggcaacaCTGCGTTCACCCAAAATACAGGAGCTGCTGAGCAAGACCAACGAATGGCGCAACGCACACTTGGCTGGCGAACAAAAGGAGAATATTGCCGAAGAACAACCGAATGGACTGCACAGCGATCTGATCGGCAATCTGTTGGGCATCAGCGATCAAGGTATACTCAATAAATTGCTCTCGTCGCCCGACGAAGCGGCCAAACTGTTGGGTGTGGAGAAGTAA
Protein Sequence: MLATAAASTQAALDAIQTSVTKMERRDSTTSESSLEHLDLGRTPKKLSAHSSATSTPHTNTNSTSSSNNRANGNDVLAKDANNTNATPVTVGCGATTKPVLPHQQRHINDSDEANDYDDDDEESPDEQCLGKSNAHNSRSQRHHKRRSTAPRLDKRTSVHLEFNADDPNSLRKKFRFNRSNSVSEQMSSNNESGFVDASCSSHYLNASAVSLAAAAAVAAAAATTTSTTGTTAAINMTPTVHSSISASASASGSVSATGSHSSSSAASSPRGCGAGLATSSASVSSPESGIGDREREDMKFVCTICDVVSATRHEFTNHIRCHNYASGDTENYTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKQSSHSHNNNNNSAAGMPASSGGTDAFASATNNYAQLGNGLIGEGVKTATASAEVLALTNDGSTAATAQAGGDAVATIGAGVNGKRLHSSGVESCESDGGCSTDSSSSAISHSSNNNHSNKNNNSDNINNNATNNYNNNMNAKRNRLGNFKRKSSEQHDEDNADAEADGLTMMTATKRRVKTTINNNIIGEDVDELDARMVAHNNDSAMVNTKASASSSASAMSADERDDDDEDVEQKPYFACPICPVCNAADFADTRALDNHLDSEHADIPAKCRHCEVVFRTHRQLSLHPCTQRLLGSRPMPLVECVKCGQSFETADALELHARDCHTHELRHARRSRSLSDSFVAAPLTEAEIEDKTNQIRNNFLRQLYLQSQKPFCAQSLISLPSPQHSAHDEVDSANMSNTDIKVEAADTEPTDQLTSNLLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSMDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSTCDDPAKKLHMFSSPDFDDDMELQYQQHHPKDRSTPVSHLKEILTAESPLAKPIKIQVKSLEQLLDKSTGSVGSYNDSFEERTPAPSSLQHNETAPIDLSMDVLDLSKKPTAKPVEKETIAAPALPVTENGIDPEKKLDLFSYVKENLNMPKMLELWSLSAQFPFMPDFAPLMNQMFGGNAAANPFLPPGLDLNKSMQASANMTPPMLPNLNSLMADKLNTHPHTTPDPNIMNQMLPTSMMTPPPPNTGMSMPRHSHIPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRTGHHSMRGRGATSATTINSISHLQAAIAQAHNNATQAQGNGLGAAPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIANSHHMLLNAAGAAIGPLGPPNGLQFPFNHLGQPVNINGNAEDDEPKLIIDEDEDDDVEEILDDNEEDEEFQESNEHFEHVRKFQAPAPVVEEVKTAPPATNESNNETAKKVAETILEQAKKTVQKTNQTTSKSNANFTAKPTPTKSVAPATTPAAPAAPVTPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVAKLVDNATSNAVSFNNYFRPSDVANHMEQSDEEGLVASGSASESNHSGTEDVAAPAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEEQRKRKAEEVKLERERREKEQRLQQEKEQQNKLFKQLAVAQLQQQLNVSMSAAANASSNAEADARAKENLSQLNADLPYKCHLCENSFAERFNCLEHIKKQHAPEFTLLLSKGAIVSDAEANQTQLLEDEERRVGEEANNFALLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHTSRGQNGAAGSDGASPMGNSGSDFSDDEQMPTPTSTTTTASACTNIATATTTSPATTATAATLRSPKIQELLSKTNEWRNAHLAGEQKENIAEEQPNGLHSDLIGNLLGISDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191533;
90% Identity: iTF_00193771;
80% Identity: -