Basic Information

Insect: Bactrocera tryoni
Gene Symbol: RREB1
Assembly: GCA_016617805.2
Location: NC:14188866-14204423[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.014 0.84 9.9 2.1 1 21 300 320 300 322 0.95

2 14 0.00029 0.017 15.2 0.1 1 23 332 354 332 354 0.98

3 14 2.3e-05 0.0014 18.7 7.5 1 23 360 382 360 382 0.98

4 14 0.41 24 5.3 2.3 2 19 672 689 672 689 0.96

5 14 0.00079 0.047 13.8 0.2 2 23 705 727 704 727 0.94

6 14 0.0081 0.48 10.6 0.1 1 23 893 915 893 915 0.97

7 14 1.9e-05 0.0011 18.9 1.2 1 23 925 947 925 947 0.99

8 14 0.0006 0.036 14.2 2.2 1 23 953 976 953 976 0.97

9 14 0.0029 0.17 12.0 2.0 1 23 1288 1311 1288 1311 0.95

10 14 8.4e-05 0.005 16.9 0.3 2 23 1672 1693 1671 1693 0.97

11 14 0.14 8.4 6.7 6.3 1 23 1699 1722 1699 1722 0.97

12 14 2 1.2e+02 3.1 5.1 1 23 1839 1862 1839 1862 0.97

13 14 0.0082 0.49 10.6 0.5 3 23 1917 1937 1915 1937 0.96

14 14 0.0013 0.077 13.1 4.8 1 23 1943 1965 1943 1965 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.014	0.84	9.9	2.1	1	21	300	320	300	322	0.95
2	14	0.00029	0.017	15.2	0.1	1	23	332	354	332	354	0.98
3	14	2.3e-05	0.0014	18.7	7.5	1	23	360	382	360	382	0.98
4	14	0.41	24	5.3	2.3	2	19	672	689	672	689	0.96
5	14	0.00079	0.047	13.8	0.2	2	23	705	727	704	727	0.94
6	14	0.0081	0.48	10.6	0.1	1	23	893	915	893	915	0.97
7	14	1.9e-05	0.0011	18.9	1.2	1	23	925	947	925	947	0.99
8	14	0.0006	0.036	14.2	2.2	1	23	953	976	953	976	0.97
9	14	0.0029	0.17	12.0	2.0	1	23	1288	1311	1288	1311	0.95
10	14	8.4e-05	0.005	16.9	0.3	2	23	1672	1693	1671	1693	0.97
11	14	0.14	8.4	6.7	6.3	1	23	1699	1722	1699	1722	0.97
12	14	2	1.2e+02	3.1	5.1	1	23	1839	1862	1839	1862	0.97
13	14	0.0082	0.49	10.6	0.5	3	23	1917	1937	1915	1937	0.96
14	14	0.0013	0.077	13.1	4.8	1	23	1943	1965	1943	1965	0.99

Sequence Information

Coding Sequence: ATGCTCGCCACAGCAGCCGCCAGCACACAAGCAGCATTGGATGCCATACAAACGAGCGTCACCAAAATGGAGCGACGTGACTCAACGACTTCGGAATCATCGTTGGAGCACTTAGATTTGGGACGCACGCCAAAGAAGCTCAGCGCACACTCATCGGCCACATCGACGCCGCATACAAACACCAAcagcaccagcaacaacaacagagccAACGGCAATGATATGCTTGCAAAAGATGCCAACaacacaaatgcaacaacatcAACTGTTGGCTGTGGTGCCACCACCAAGCCAGTGCTACCCCATCCGCAGCGACATATCAACGACTCCGATGAGGCGAATGATTATGACGATGACGATGAGGAGTCGCCCGACGAACAGTGCCTTGGCAAGTCGAATGCACACAATTCGAGATCACAGCGTCATCACAAGCGTCGCAGCACAGCGCCACGTCTAGACAAACGCACCAGCGTACATCTGGAATTCAATGCGGACGATCCCAATTCGCTGCGcaagaaatttcgctttaatcgcAGCAATTCTGCATCCGAACAAATGTCCAGCAATAATGAGTCTGGCTTCGTGGACGCCAGCTGTAGTAGTCATTACCTGAATGCCTCGGCAGTGTCATTGGCGgcggcagcagcggtggcagcgGCAGCCGCGACGACGACGTCGACAACAGGCACCACAGCTGCAATTAACATGACGCCGACACTGCATAGCTCAATCTCTGCATCGGCGTCGGCATCGGGTTCGGTGTCGGCGACAGGCTCGCACAGTTCATCGTCGGCTGCTTCTTCACCGCGTGGCTGTGGCGCCGGTTTGGCTGCTTCCTCCGCCTCGGTGTCCAGTCCCGAATCGGGTATTGGCGATAGAGAACGCGAGGACATGAAGTTCGTGTGCACCATATGCGATGTGGTGTCGGCGACGCGTCACGAATTCACAAACCACATACGCTGTCACAATTACGCCTCCGGCGATACGGAGAACTACACATGTGCTATTTGCTCCAAGGTGCTCTCGTCGGCCTCCTCACTGGATCGGCATGTGCTGGTGCACACGGGCGAACGACCATTCAATTGCAAATATTGTCACCTCACCTTCACCACCAACGGCAACATGCACCGGCACATGCGCACACACAAGCAGCATCAGCACAATCATCATCATCGCCGCAACTCGAATGGAACAAAGCAAAGCAGTCATagtcacaacaataacaacaacaatgccggCGGTATGCCCGCCAGCAGTGGCGGAACCGACGCTTTCGCCTCAGCCACCAACAATTATGCGCAATTAGGTAATGGCTTGATTGGTGAAGGCGTCAAAACACCAACAGCATCAGCCGAGGCCTTAGCGTTGACGAACGACGGCAGTACGGCCGCCACTGCGCAAGCTGGTGGTGACGCCGCCGCGACCATCGGTGCAGGTGTTAATGGTAAACGCTTACACAGTAGTGGCGTAGAAAGTTGCGAAAGTGACGGCGGTTGCTCAACAGACTCCTCATCAAGTGCCATCAGCCATAGCTCAAATAATAAtcatagcaacaaaaacaataacagcgacaatattaacaacaatgccacaaataattacaataacaatatgaACGCGAAGCGTAATCGTTTAGGTAACTTTAAACGTAAAAGTAGTGAACAACATGACGAAGACAACGCGGACGCCGAAGCTGACGGTCTGACAATGATGACAGCGACGAAGCGACGCGTGAAGACCAccataaacaacaacataatcGGCGAGGATGTGGATGAGGTTGATGCGCGCATGGTCGCGCATAATAATGACAGCGCGATGATAACCACAAAAGCCAGCGCATCCTCTTCCGCATCGGCCATGTCGGCAGATGAACGTGATGACGATGATGAGGACGTCGAGCAGAAGCCGTACTTCGCTTGTCCCGTCTGTCCGGTATGCAATGCGGCTGACTTTGCCGATACACGCGCCTTGGACAACCACTTGGACAGCGAGCACTCGGACATACCCGCCAAGTGCCGACACTGCGAGGTGGTCTTTCGCACACACCGTCAACTGAGCTTGCATCCGTGCACGCAGCGCTTGCTAGGCAGTCGTCCGATGCCGCTGGTGGAGTGCGTGAAATGTGGTCAGAGCTTTGAGAATGCCGACGATTTGGAGCTGCATGCGCGCGATTGCCACACCAACGAGTTGAGGCATGCGCGGCGTAGTCGCAGTCTGAGCGATAGTTTCGTAGCAGCGCCTCTGACGGAAGCCGAAATTGAGGATAAGACAAACCAAATACGCAACAATTTCTTGCGTCAGCTATATCTGCAAAGTCAAAAGCCTTTCTGTGCGCAGAGTTTGATCTCGCTGCCCTCGCCGCAACACTCCGCACACGACGAAGTGGATTCGGCGAACGTAAGCAATACCGATATCAAAGTTGAGGCAGCCGACACTGAGCCAACAGACCAATTGACAAGTAATTTACTTTCACAACAGTCGCACGACTCGAAAGATCTTGCCGATATACAATCGATACTCAATATGACTTCGTCGTCCTCAACATCCAATTTTCTGAAGAACTTCGAGCAATCGGTGAACACACCATCCAGCAATTATAGCATGGACAAGGATGAGGAGGAGGCGCAAGATGCCTTCACGTCGGAGTTTCGTAAAATGAAATTGCGTGGTGAGTTTCCATGCAAGCTCTGTACGGCTGTCTTTCCGAACTTACGTGCGCTAAAGGGACACAACCGTGTGCATTTAAGTGCCGTTGGGCCGGCAGGACCGTTCCGTTGCAACATGTGCCCTTACTCAATATGCGATAAGGCTGCGCTTGTGCGTCACATGCGCACACATAACGGCGATCGGCCCTACGAATGTGCCGAATGCAATTATGCCTTCACTACGAAGGCAAACTGCGAACGCCATTTGCGTAATAGGCATGCGAAGACTACACGCGACGAGGTCAAACGTGCCATTATATATCATCCATCCGAAGACTCGACCTGCGATGATCCCGCCAAAAAGCTGCATATGTTCTCATCGCCCGACTTCGATGACGATATGGAGTTGCAATATCAGCAACATCATCCCAAAGATCGCTCGACGCCCGTGTCACACCTTAAGGAAATCTTAACCGCTGAAAGTCCACTTGCCAAACCGATAAAGATACAGGTTAAGAGTTTGGAGCAATTGTTGGACAAGTCAACCGGTTCAGTTGGAAGCTACAATGACTCGTTTGAAGAACGTACACCAGCGCCGTCCAGCTTGCAACACGGCGAGACAGCACCCATCGACTTGAGTATGGATGTTTTGGATCTTAGCAAGAAACCCACAGCTAAGCCCGTAGAAAAGGAGACCATTGCCGCGCCAGCTTTACCAGTAACAGAAAATGGCATTGATCCGGAAAAGAAGCTGGATCTATTTTCTTATGTgaaggaaaatttaaatatgccaAAAATGCTGGAACTCTGGAGTTTGTCCGCACAATTCCCATTCATGCCCGATTTCGCGCCACTAATGAATCAGATGTTTGGCGGCAACACTGCTGCTAATCCATTTCTGCCACCCGGTCTGGACCTAAATAAGAGCATGCAAGCTTCGGCAAACATGACACCACCAATGTTACCGAATCTGAACTCCCTAATGGCCGACAAACTAAACACACATCCACATACCACACCAGATCCCAATATAATGAATCAAATGTTGCCCACATCCATGATGACGCCACCTCCACCCAATAACGGCATGAATATGCCACGTCACTCACACATTCCACCCACGGTATTGCCAGGTGGCCCCGTCAAAATGGTGATCAAGAACGGCGTACTGATGCCCAAACAGAAGCAGCGTCGTTACCGTACCGAACGGCCCTTCGCCTGCGAGCATTGTTCCGCGCGTTTTACGCTCCGCTCAAATATGGAGCGACACGTGAAGCAACAACACCCACAGTACTACGCACAACGTCACCGCACCGGCCACCACAGCATGCGTGGACGTGGCGCCACCAGTGCAACGACAATGAACAGCATTTCCCATTTACAAGCGGCAATTGCTCAAGCGCACAATAACGCCACCCAAGCACAAGGCAATGGACTGGGCGCCGCGCCGATATCGGAGCAAGTGAAATACGCCATACTGGCGCAGCAGCTGAAGGCGCGCAAGGACACTGACTTGCTGCAACAGGCGCTGGCACACGGCTCCAGTAGCATTGCAAATAGTCATCATATGTTGCTGAATGCTGCCGGCGCTGCAATTGGACCGCTGGGTCCACCAAACGGTCTCCAGTTCCCATTCAACCATTTGGGTCAACCCGTGAACATTAATGGCAACGCGGAAGATGATGAGCCCAAATTGATTATTGATgaggatgatgatgatgatgacgtcGAAGAAATACTGGACGACAATGAAGAGGACGAAGAGTTCCAAGTGTCGAACGAACATTTCGAACATATGCGCAAATTTCAAGCGCCAGCACCCGTCGTGGAGGAAGTAAAGACTGCACCTCCTGCTACCAATGAGTCCAACAATGAGACAGCCAAGAAAGTTGCAGAAACCATACTGGAACAGGCGAAGAAAACTGTTCAAAAACCAAATCAAACGACCACCAAATCCAACGCAAACTTTACCGCCAAACCCACACCTACTAAGTCGGTTGCACCAGCGACGACACCGGCAGCACCTGCGGCGCCTGTTACGCCAGCCAACACAATGAAAGCCATGATTGCACAAGCCGAGTCGGTGGGCAAGTTTCTGAAAGAGGTCGCCAGTTCACCCTTCAAAGATGAATCGCAAGATCTGGTGCCGGTTGCCAAACTGGTAGACAATGCCACCAGCAACGCCGTTTCATTCAATAACTATTTCCGCCCCAGCGATGTAGCCAATCATATGGAACAAAGTGACGAAGAGGGTCTAGTGGCTTCGGGTAGCGCCAGCGAAAGCAATCACTCCGGCACCGAAGACGTAGCCGCACCAGCGGAGCCGAAAAAGAAATCAGCTTATAGTCTGGCGCCAAATCGTGTCTCATGCCCCTACTGTCAACGCATGTTCCCCTGGTCCAGCTCACTGCGACGCCACATACTCACGCACACCGGCCAAAAACCCTTCAAATGTTCGCACTGTCCACTGCTCTTCACCACAAAAAGCAATTGTGATCGACATTTGTTGCGCAAACATGGCGACGTTGAGTCAGCGGTGTCGGTCTATGTGCCAACCGAAGATGTCAACGAGCCGATACCAGTGCCAAAATCCGTCGAAGAGATCGAACAACAGCAGCGACAACGCGAAGAGGAGCAACGCAAACGCAAAGCTGAAGAGGTGAAATTGGAGCGCGAGCGTCGTGAGAAGGAGCAACGCTTACATCAGGAGAaggaacaacaaaacaaactcTTCAAACAATTGGCTGTCGcgcagctacaacaacagctcAATGTCTCAATGAACGCGGCCGCCAATGCGGCCAGCAGCGCCGAAGCTGATGCACGCGCCAAAGAGAATCTCTCACAGCTCAACGCCGACTTGCCATACAAATGTCATTTGTGTGAGAACTCTTTCGCCGAGCGCTTCAATTGTCTGGAGCACATCAAGAAGCAACATGCACCCGAGTTCACATTGCTACTCAGCAAAGGCGCAATCGTCAGCGATGCCGAAGCCAACCAGACGCAATTGCTCGAGGACGAGGAGCGGCGTGTGGGCGAAGAGGCGAATAACTTTGCGCTGCTGCCGAAACTACCGGCCTACACCAATCGCAAAGTGATTTGCGCCTTCTGCGTGCGTCGCTTCTGGTCCACCGAGGACTTGCGCCGACACATGCGCACACACTCGGGCGAACGTCCCTTTCAATGCGAAATCTGCTTGCGCAAATTCACGCTGAAGCACAGCATGCTGCGACACATGAAAAAGCACACAAGTCGCGGTCAAAATGGCGCCGCCGGCAGCGATGGCGCGTCGCCAATGGGTAACAGTGGCTCGGACTTTTCGGACGATGAACAAATGCCGACGCCACCAACGTCTACATCTACAACTGCAGCTGCAGCTGCCCTCACCAGCGCCGCTACGGCCACGACAACGTCGCCGGCGACCACAGCAACAGCGGCAACAGTGCGTTCACCCAAAATACAGGAGCTGCTAAGCAAAACCAACGAATGGCGCAGCGCTCACTTGGCTGGCGAACAAAAGGAGAATATTGCCGAAGAACAACCGAACGGTCTACACAGCGATCTGATCGGCAATCTGTTGGGCATCAGCGATCAAGGTATACTCAATAAATTGCTATCGTCGCCCGACGAAGCGGCCAAACTGTTGGGTGTGGAGAAGTAA
Protein Sequence: MLATAAASTQAALDAIQTSVTKMERRDSTTSESSLEHLDLGRTPKKLSAHSSATSTPHTNTNSTSNNNRANGNDMLAKDANNTNATTSTVGCGATTKPVLPHPQRHINDSDEANDYDDDDEESPDEQCLGKSNAHNSRSQRHHKRRSTAPRLDKRTSVHLEFNADDPNSLRKKFRFNRSNSASEQMSSNNESGFVDASCSSHYLNASAVSLAAAAAVAAAAATTTSTTGTTAAINMTPTLHSSISASASASGSVSATGSHSSSSAASSPRGCGAGLAASSASVSSPESGIGDREREDMKFVCTICDVVSATRHEFTNHIRCHNYASGDTENYTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKQSSHSHNNNNNNAGGMPASSGGTDAFASATNNYAQLGNGLIGEGVKTPTASAEALALTNDGSTAATAQAGGDAAATIGAGVNGKRLHSSGVESCESDGGCSTDSSSSAISHSSNNNHSNKNNNSDNINNNATNNYNNNMNAKRNRLGNFKRKSSEQHDEDNADAEADGLTMMTATKRRVKTTINNNIIGEDVDEVDARMVAHNNDSAMITTKASASSSASAMSADERDDDDEDVEQKPYFACPVCPVCNAADFADTRALDNHLDSEHSDIPAKCRHCEVVFRTHRQLSLHPCTQRLLGSRPMPLVECVKCGQSFENADDLELHARDCHTNELRHARRSRSLSDSFVAAPLTEAEIEDKTNQIRNNFLRQLYLQSQKPFCAQSLISLPSPQHSAHDEVDSANVSNTDIKVEAADTEPTDQLTSNLLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSMDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSTCDDPAKKLHMFSSPDFDDDMELQYQQHHPKDRSTPVSHLKEILTAESPLAKPIKIQVKSLEQLLDKSTGSVGSYNDSFEERTPAPSSLQHGETAPIDLSMDVLDLSKKPTAKPVEKETIAAPALPVTENGIDPEKKLDLFSYVKENLNMPKMLELWSLSAQFPFMPDFAPLMNQMFGGNTAANPFLPPGLDLNKSMQASANMTPPMLPNLNSLMADKLNTHPHTTPDPNIMNQMLPTSMMTPPPPNNGMNMPRHSHIPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRTGHHSMRGRGATSATTMNSISHLQAAIAQAHNNATQAQGNGLGAAPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIANSHHMLLNAAGAAIGPLGPPNGLQFPFNHLGQPVNINGNAEDDEPKLIIDEDDDDDDVEEILDDNEEDEEFQVSNEHFEHMRKFQAPAPVVEEVKTAPPATNESNNETAKKVAETILEQAKKTVQKPNQTTTKSNANFTAKPTPTKSVAPATTPAAPAAPVTPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVAKLVDNATSNAVSFNNYFRPSDVANHMEQSDEEGLVASGSASESNHSGTEDVAAPAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEEQRKRKAEEVKLERERREKEQRLHQEKEQQNKLFKQLAVAQLQQQLNVSMNAAANAASSAEADARAKENLSQLNADLPYKCHLCENSFAERFNCLEHIKKQHAPEFTLLLSKGAIVSDAEANQTQLLEDEERRVGEEANNFALLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHTSRGQNGAAGSDGASPMGNSGSDFSDDEQMPTPPTSTSTTAAAAALTSAATATTTSPATTATAATVRSPKIQELLSKTNEWRSAHLAGEQKENIAEEQPNGLHSDLIGNLLGISDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191533;
90% Identity: iTF_00190849; iTF_00193008; iTF_00191533; iTF_00192301;
80% Identity: -