Basic Information

Insect: Atrophaneura dixoni
Gene Symbol: -
Assembly: GCA_018248015.1
Location: DWHX01004747.1:9746-17472[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 2e-05 0.0031 19.5 0.8 1 23 117 139 117 139 0.98

2 27 0.0016 0.26 13.4 0.7 2 22 172 192 171 192 0.93

3 27 2.3e-05 0.0036 19.3 0.2 3 23 224 245 222 245 0.96

4 27 0.00028 0.044 15.8 0.7 1 23 297 320 297 320 0.97

5 27 0.003 0.48 12.6 0.2 1 23 336 358 336 358 0.95

6 27 0.0011 0.17 14.0 1.4 2 23 396 417 395 417 0.95

7 27 0.0019 0.3 13.2 1.6 2 23 460 482 460 482 0.97

8 27 7.4e-05 0.012 17.6 1.0 1 23 532 555 532 555 0.97

9 27 0.0097 1.5 11.0 0.2 1 23 612 634 612 634 0.97

10 27 0.025 3.9 9.7 5.7 2 23 646 667 645 667 0.96

11 27 0.089 14 8.0 2.3 2 23 679 700 678 700 0.96

12 27 0.0066 1 11.5 1.1 1 23 710 732 710 732 0.98

13 27 0.0052 0.82 11.8 8.5 1 23 760 782 760 782 0.96

14 27 0.0013 0.2 13.7 2.0 1 23 793 815 793 815 0.98

15 27 7.2e-06 0.0011 20.8 0.3 1 23 823 845 823 845 0.99

16 27 0.0027 0.43 12.7 0.1 2 23 865 887 864 887 0.97

17 27 8 1.3e+03 1.8 2.2 1 23 905 927 905 927 0.87

18 27 0.081 13 8.1 4.6 1 23 934 956 934 956 0.98

19 27 0.32 51 6.2 4.5 2 23 967 989 966 989 0.95

20 27 0.0014 0.23 13.6 0.2 2 23 1012 1033 1011 1033 0.95

21 27 0.0024 0.38 12.9 0.5 1 23 1113 1135 1113 1135 0.96

22 27 0.19 30 6.9 4.8 3 23 1143 1163 1141 1163 0.94

23 27 0.016 2.5 10.3 0.7 2 23 1174 1196 1173 1196 0.95

24 27 10 1.6e+03 1.5 6.6 2 23 1213 1231 1213 1231 0.87

25 27 2.3 3.6e+02 3.5 1.6 2 21 1235 1254 1235 1255 0.93

26 27 1.7 2.7e+02 3.9 0.6 2 23 1304 1325 1303 1325 0.93

27 27 0.00064 0.1 14.7 0.3 2 23 1336 1358 1335 1358 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	2e-05	0.0031	19.5	0.8	1	23	117	139	117	139	0.98
2	27	0.0016	0.26	13.4	0.7	2	22	172	192	171	192	0.93
3	27	2.3e-05	0.0036	19.3	0.2	3	23	224	245	222	245	0.96
4	27	0.00028	0.044	15.8	0.7	1	23	297	320	297	320	0.97
5	27	0.003	0.48	12.6	0.2	1	23	336	358	336	358	0.95
6	27	0.0011	0.17	14.0	1.4	2	23	396	417	395	417	0.95
7	27	0.0019	0.3	13.2	1.6	2	23	460	482	460	482	0.97
8	27	7.4e-05	0.012	17.6	1.0	1	23	532	555	532	555	0.97
9	27	0.0097	1.5	11.0	0.2	1	23	612	634	612	634	0.97
10	27	0.025	3.9	9.7	5.7	2	23	646	667	645	667	0.96
11	27	0.089	14	8.0	2.3	2	23	679	700	678	700	0.96
12	27	0.0066	1	11.5	1.1	1	23	710	732	710	732	0.98
13	27	0.0052	0.82	11.8	8.5	1	23	760	782	760	782	0.96
14	27	0.0013	0.2	13.7	2.0	1	23	793	815	793	815	0.98
15	27	7.2e-06	0.0011	20.8	0.3	1	23	823	845	823	845	0.99
16	27	0.0027	0.43	12.7	0.1	2	23	865	887	864	887	0.97
17	27	8	1.3e+03	1.8	2.2	1	23	905	927	905	927	0.87
18	27	0.081	13	8.1	4.6	1	23	934	956	934	956	0.98
19	27	0.32	51	6.2	4.5	2	23	967	989	966	989	0.95
20	27	0.0014	0.23	13.6	0.2	2	23	1012	1033	1011	1033	0.95
21	27	0.0024	0.38	12.9	0.5	1	23	1113	1135	1113	1135	0.96
22	27	0.19	30	6.9	4.8	3	23	1143	1163	1141	1163	0.94
23	27	0.016	2.5	10.3	0.7	2	23	1174	1196	1173	1196	0.95
24	27	10	1.6e+03	1.5	6.6	2	23	1213	1231	1213	1231	0.87
25	27	2.3	3.6e+02	3.5	1.6	2	21	1235	1254	1235	1255	0.93
26	27	1.7	2.7e+02	3.9	0.6	2	23	1304	1325	1303	1325	0.93
27	27	0.00064	0.1	14.7	0.3	2	23	1336	1358	1335	1358	0.96

Sequence Information

Coding Sequence: TTCAGCAGCATACCATCACCACCTAACAGACAAAGTAGTGACTCGGCATTCTCAAACCATACCGACATATCTAGCAGCAACAAACTAATATCAccaaaagaaagtaaaatctCACCAGGAAGCCGGAGGCGAAAACGTAGTATAGAGAGCAATGGTAACGCTTCCACAACCAGCCAATCACAAGAATTCAGACCCTCTTCATCAAAACGGGTCGAAGAACTCCGATCCTCTGAGAAAAGAGCAAGGGCATCCGTTAACATACCTTCAATGGACTCTGACTACGACGACAATAGTTTTTCACAATTCTCCGGCGAAACTGACTCCGATGAACCGATGGCGAAGACCGGGTTTAAATGCAAAATTTGCGACAAGGAGTTCGCATCCAAGCAGAGTGTGAACGCACACACAAAAGTTCATAGTAGAAAATCATTAAAGCAAAACGCTTTGGTTAATATACCGCAGCCGGCCAGCGTCGCTCATTTGGAGGACGCCACAGACGTAGAAGATAAGCTAACGTGCGACAAATGCGAGAGGACgttcaagttaaaaataatgttgaaacGGCACCAGGAGACGTGTGGCAAGACACCGCCGAAATCGCCGATGAAAGAATTGCTAGTGTCTCTAGAGCCGATCGATGCGGAGCCAAAAAACGGAAACAAGATCGACTGTGATATATGCACAGCGAAGTTTAAAACTACCGAGAACTTGGAGAAGCACATGAGGGTGGTACACGCTGCTGTCCTCAAACGAGACCAGCGCGAACAAAACTTGGCCAATGGGAAGATCAGCGTCCCCTGTTACTACAAATGTGGACAGTTTCACGACGACTACTACATGTACACCAAACACTTCGACACCTGCCCAAATAAGAAAGACTCGATCGTATTCACCTGTCCATTGTGTCAGAGGGTAGTAACGAAAAAGAGTTCctactttatacatataagaAACATCCATTTCAATTGTCAGAGCAGTAACAGCGCAGGTACTTCTAAAGAATCGTTTGATTGTCGAATATGCAATAAGAAATTGGCGACACAAAACCAGCTGATCACTCATCTCGCTGCTCACATGTCCAACATAGACGACGAGGACATCATCGACCGGGCCTCTggTTTAGGTGAGATTGAAGACGACAATGAGCCGATGTACAGCAGCTCACATGTTCCTAGTGGGCCGCTAAAATGTAGCATGTGCGAAAAACGGTTCACGTACAAGAAGGCTCTAGTCACCCACGAGGATAAACACCTTTCCGGTGAAATACAGATAAAGACGGAGCCGGTTGAGAAAAACGAGTCCGGTAATAGTTTGCTGAGCGAGTCCCAACATCAGTCCGAGTCTGAATCTAGTCAGGAAGAAGGTGACGACGACAACACGTGCGACATTTGCGAGAAGCAGTTCTCTTACAGACGCGTACTGATCCAACACAAACGCACCAAACACAACATGAGCTCGGGGACGAAGCGTGCGAAAATCAACCTCAAGGACTGCTCCGTTCGTTGTCTGATATGCGACATTGAAATGAAGGTCAGCGCTATAAACGAACATAATCAGAAGCACACGTCGGTGAACATCAAACCGAGGAACCTGTACACGTGCGCGGAGTGCGATGAGCAATTCAAAAGCTGCAGCTCACTCGCCACTCACATCAAGTTGGTGCACAGGCTGAAGCAACCGCACACGCCCAAGCTGCAGGGTGCTGAATTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCAATGGCCTTTGGCCAGATCCACAACGACTATGAAACGGTTCCGTCGACACAGGAGGAGGAGGGTCCATTGGTTAATCTCAGCGGGTTTAATTGCCCGATATGCAGCAAGAAGATGCCGACGTTGATATCGCTGAAGAGGCACGTGAACTGGCACGCCAACGTCGGTAATAGTTTAGAGAAGAAGCTGGAATGCTTTGTCTGCAAGGAGATGTTCCGGTTCCAGTGCCATTACAAACTGCACATGCGCGAACACTACAACGATCCGAACATAGACCCGGCGCTGCTCACGTGCACTATATGCAACCGGAAGAGCAAACACTTGCGCGCGGCCAAGGCGCACATGAACTTCCACAAACAAACACGCTTCAAGAACAAAGACTACCAGTGTTCCATTTGCAAGAGGGTCTTTCAATTTAGGAAAGTTTACCTCTCGCACATGGCGATACATTACAAGCGCGGCGAGAGCATAAACTCGATCGTCGGCGTCGATTTACCCACCACGGCGGACAAGAACGTGCTCGACGGCACACACACCTGCCACCACTGCGGCAAGGTGTGCGACTCCGAGAACTCACTCAAGCATCACATAATATGGCACAAGTCGAAGACGTCACTGTTCGGCGAACGTTACGAATGCCACATTTGCGGAATACAATTCACCAACAAGAAAAGACAGGAGCTTCACGTAAGAAGTCATTACGAAGATGATAATGGCCCGTACAAGTGCCCTATCTGTGGCAAGGGTTTCATCGATGAGGGTTATCGCAAAAGACACGTAAGAAGTCACAATTTTGACCATCAGTCGCATAAAACGAGGTTAGAGAATCTACGTAAAGATAAAGTGAAATGTCCAATTTGTGTCCGTTACTACCCGGACTTGGTGAAGCTTATACGTCATTTGCGGCGAACGCATCCCGAGAGCAAAATGATTAAGTCTGATCCGGACGCTCCCCCCCAGAACTACTTCTCATGCAAACTGTGTGCTAAAGTCTTCTTAGACGAGCGACGGTTACACCATCACGAGGAGGCTCACTTGAGGAAGCCGGAGTTCTTCAAATGCAAGTTCTGCGGCAAGAAGACAATCTCCTTGAAAAACCATAGAATTCACATAAAATCTCACTTGACCCAAAAGTACACTGATGAGCCACTGAAGTGTATGCACTGCGAGGAAACATTCATGAAAGGCTACGACCTGCACCACCACTTGCGCGACATACACGACATCAACGAAACTTGGATAGAGGAGCGCACCGAGAAGAAACTTAACGGGCCTTTGAAAGATTTGCAATGCTCCATTTGCCTGAAGGTATTGGCTAACAAAGGTAACTTTGAGCGGCACATTGATTACCACAACTCGCTGAGGTGTAATTACTGCTTCGATTACTTCAGCTCGCTCAGATTCTTGGAGGGCCACCTCACTTTCAGCTGCGAAAAGAAAAAGTTGATCGGCGATACGGAGGTTTACCCAAAAAAAGTGAAGTGCCACCTTTGTTACAAACCTTTCCATTTGCAAGTGAAATTGGACTGCCATTTGCGAATCCAACACGGCATCAGAGTTAGTAAAGAGGAGTCCGAAAGCAAGAAGGACTTTGTCTGCGACTACTGCTTCAAAGTATTCGAGAACGAGTACGCTTTGGGCAACCACAAGATTTACCATCGCACGATAGGATACTACGGCTGCTTGTATTGCAACCGGAAGTTCAGTACTACAACTCTTTACAATAAACACAAGACTCATCACTTGTCACAACTTAATGTCGAACGCCCGAATAAGTGCGAGCACTGCGACGAGACGTTCGTCGCGTTCAGAGAGATGATCTACCACATGAGGGATGTACACGGCGATGATAAGGAATGGATAACCATGCCTAAAGAATCAATTGAAGAGGAGTGCCATATTTGCCACAGAGTTTTCTTCAACCTCCACAAGCATTTGGCGTACCACGAAGAGAATAGATGCAAAAAGTGTTCAGAGTATTTCTTCTCGCAAGTCGACTACGACAACCACCTGTGCGCCATCGAGAGCGAGGAGGAAGCGGACGAGAGCAACGAAGCCGACGTGCGGCCGACGTACACCGAGTGTGATTTCTGCTTCAAGTCAACTACCAAGAAGACTTCGAAGCGGCTGCACGACCACATACACAGGGTCTCCGGCGCGATCTCGTGCCGCTTCTGTGCCCTCAAGTTCAAGACCATGGACGCATTCAACATCCATGCATTTTCTCACCGCAGCAGGAAGTACGACAAGAAACCGATAAAGTGTCGGCAGTGCGGCGAGAAGTTCGTCCGCTACGGGCCGTTCATAAAGCATATGAAGATCGTGCACAAGTCTAAACAAAAGATGCACTACCGCGCTGCGGTGAAGCCGGAGCCCTGCGCCGTCTGCGGAAATTCCTACCCCAACCTCCATAACCACTACCGAGCTCACCTGCAGAACCAATGCCTGTCCTGTCGGAAATACTTCACGTCGTGTAACGTCTTTTCGTTGCACGAATGTGATAAAGAGGACTCGGATCCATCTAAAGTGATCACGAGTGACGTGGACGTACTGGCCCAAATTAAAGCCTACACTCCCAAAGACGAGAAGGACGATGAGAAATACTACGGGCACACTGATACTGAAGAAGAGGAAATCGTGGAGGAGGTAACGGATAATCGCGAGCCAGAGTACATGATACAAGATGAGAGTAGTCAGAACTCAACGGACGTTAATATGCACATGATGGTTCACACTCCAATCATATCCGATGTGCTGTCACTCTACCAGAAGAATGAAGAGAACGACAACGAGATGTCTAATGATGTTGTCAACTTGGTAGATGAGGACTGCTTGGAGGGTGAAAGGGTGGTCTCTGTTATAACAATTGAtgattga
Protein Sequence: FSSIPSPPNRQSSDSAFSNHTDISSSNKLISPKESKISPGSRRRKRSIESNGNASTTSQSQEFRPSSSKRVEELRSSEKRARASVNIPSMDSDYDDNSFSQFSGETDSDEPMAKTGFKCKICDKEFASKQSVNAHTKVHSRKSLKQNALVNIPQPASVAHLEDATDVEDKLTCDKCERTFKLKIMLKRHQETCGKTPPKSPMKELLVSLEPIDAEPKNGNKIDCDICTAKFKTTENLEKHMRVVHAAVLKRDQREQNLANGKISVPCYYKCGQFHDDYYMYTKHFDTCPNKKDSIVFTCPLCQRVVTKKSSYFIHIRNIHFNCQSSNSAGTSKESFDCRICNKKLATQNQLITHLAAHMSNIDDEDIIDRASGLGEIEDDNEPMYSSSHVPSGPLKCSMCEKRFTYKKALVTHEDKHLSGEIQIKTEPVEKNESGNSLLSESQHQSESESSQEEGDDDNTCDICEKQFSYRRVLIQHKRTKHNMSSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQKHTSVNIKPRNLYTCAECDEQFKSCSSLATHIKLVHRLKQPHTPKLQGAELADFCEVVVTKAEPMAFGQIHNDYETVPSTQEEEGPLVNLSGFNCPICSKKMPTLISLKRHVNWHANVGNSLEKKLECFVCKEMFRFQCHYKLHMREHYNDPNIDPALLTCTICNRKSKHLRAAKAHMNFHKQTRFKNKDYQCSICKRVFQFRKVYLSHMAIHYKRGESINSIVGVDLPTTADKNVLDGTHTCHHCGKVCDSENSLKHHIIWHKSKTSLFGERYECHICGIQFTNKKRQELHVRSHYEDDNGPYKCPICGKGFIDEGYRKRHVRSHNFDHQSHKTRLENLRKDKVKCPICVRYYPDLVKLIRHLRRTHPESKMIKSDPDAPPQNYFSCKLCAKVFLDERRLHHHEEAHLRKPEFFKCKFCGKKTISLKNHRIHIKSHLTQKYTDEPLKCMHCEETFMKGYDLHHHLRDIHDINETWIEERTEKKLNGPLKDLQCSICLKVLANKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLTFSCEKKKLIGDTEVYPKKVKCHLCYKPFHLQVKLDCHLRIQHGIRVSKEESESKKDFVCDYCFKVFENEYALGNHKIYHRTIGYYGCLYCNRKFSTTTLYNKHKTHHLSQLNVERPNKCEHCDETFVAFREMIYHMRDVHGDDKEWITMPKESIEEECHICHRVFFNLHKHLAYHEENRCKKCSEYFFSQVDYDNHLCAIESEEEADESNEADVRPTYTECDFCFKSTTKKTSKRLHDHIHRVSGAISCRFCALKFKTMDAFNIHAFSHRSRKYDKKPIKCRQCGEKFVRYGPFIKHMKIVHKSKQKMHYRAAVKPEPCAVCGNSYPNLHNHYRAHLQNQCLSCRKYFTSCNVFSLHECDKEDSDPSKVITSDVDVLAQIKAYTPKDEKDDEKYYGHTDTEEEEIVEEVTDNREPEYMIQDESSQNSTDVNMHMMVHTPIISDVLSLYQKNEENDNEMSNDVVNLVDEDCLEGERVVSVITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01176336; iTF_01130194; iTF_01115861; iTF_01496743; iTF_01494484; iTF_01495197; iTF_01495936;
90% Identity: iTF_00249876;
80% Identity: -