Taea005070.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Troides aeacus
Gene Symbol
-
Assembly
GCA_033220335.2
Location
CM067272.1:11640610-11647679[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.00021 0.02 15.9 0.3 1 23 202 224 202 224 0.98
2 29 0.0014 0.13 13.3 0.7 2 22 257 277 256 277 0.93
3 29 0.00037 0.035 15.2 0.1 3 23 309 330 307 330 0.96
4 29 0.27 26 6.2 1.1 1 20 351 371 351 373 0.92
5 29 0.00023 0.022 15.8 0.8 1 23 383 406 383 406 0.97
6 29 0.0072 0.69 11.1 0.3 1 23 422 444 422 444 0.95
7 29 0.00039 0.037 15.1 1.8 2 23 482 503 481 503 0.97
8 29 0.00074 0.07 14.2 3.8 2 23 545 567 545 567 0.97
9 29 6.4e-05 0.0062 17.6 1.0 1 23 617 640 617 640 0.97
10 29 0.001 0.1 13.8 0.1 1 23 697 719 697 719 0.97
11 29 0.011 1 10.6 5.9 2 23 731 752 730 752 0.96
12 29 0.077 7.4 7.9 2.3 2 23 764 785 763 785 0.96
13 29 0.0084 0.8 10.9 1.0 1 23 795 817 795 817 0.98
14 29 0.0033 0.31 12.2 7.7 1 23 845 867 845 867 0.96
15 29 0.0013 0.12 13.5 3.9 1 23 878 900 878 900 0.98
16 29 0.00015 0.014 16.4 0.9 1 23 908 930 908 930 0.99
17 29 0.00056 0.054 14.6 0.2 2 23 950 972 949 972 0.97
18 29 0.95 91 4.4 0.3 2 23 991 1012 990 1012 0.91
19 29 0.26 25 6.2 2.9 2 23 1020 1041 1019 1041 0.95
20 29 0.061 5.8 8.2 4.2 2 23 1052 1074 1051 1074 0.95
21 29 0.0012 0.12 13.5 0.2 2 23 1097 1118 1096 1118 0.95
22 29 0.0027 0.26 12.5 0.5 1 23 1198 1220 1198 1220 0.96
23 29 0.26 25 6.2 4.3 3 23 1228 1248 1226 1248 0.96
24 29 0.014 1.3 10.2 1.0 2 23 1259 1281 1258 1281 0.95
25 29 3.1 2.9e+02 2.8 5.4 2 23 1298 1316 1298 1316 0.88
26 29 2.6 2.5e+02 3.0 1.8 2 21 1320 1339 1319 1340 0.93
27 29 0.56 54 5.2 1.3 2 23 1389 1410 1388 1410 0.93
28 29 0.00093 0.089 13.9 0.2 3 23 1422 1443 1420 1443 0.95
29 29 0.25 24 6.3 3.0 2 20 1481 1499 1480 1501 0.93

Sequence Information

Coding Sequence
ATGGCCCTCAAACTCGGAAAATGTAGGCTCTGCCTCAAACTTGGCGACTTCTACTCCATCTTTACGATGGATAACAATCTACAGCTCGCGGAGATGGTTATGGAATGCGCTCGAGTAAAGGTGTTCGAAggtgatggtcttcctgataaGATTTGTTCAGAATGCATTCAGAAGCTTAGCAGTGCACATATCTTTAAACAGCAGTGCGAGAGGTCTGATCAAGAGCTGAGACGCAATTATGTGCCTCCGCCAGGTTTCAGCAGCATACCATCACCATCTAACAGACAAAGTAGTGACTCTGCATTTTCAAACCATACCGACATATCCAGTAACAACAAGCTTATATCAGctacagaaaataaaatttcaccCGGAATCAGAAGGCGGAAACGTAGTGTACAGAGCAATGATAATGTTTCCACAAGCAGCCAATCGCACGACTACCGACCCTCTTCTTCCAAACGGGTCGAAGAACTCCGGAGCTCTGAGAAAAAACCAAGGGCATCTGTCAACACACCTTCAATGGATTCCGACTACGATGACTATAGTATTTCTCAATTCTCTGGTGAGACAGACTCTGATGAACCGTTGACGAAGAGCGAATTTAAATGCAAAGTTTGCGGCAAAGGATTCGCTTCCAAGCTGAGCGTCAATGCGCACTCGAAAGTTCACAGTAGAAAATCTTTAAAGCAAAACGCTCTGGTGAATATACCGCAGCCAGTCAGCGCCATCAATTTTGAGGACGCTACGGACGTCGAGGATAAGCTAACGTGTGACAAATGCGAGCGGACGTTCAAGTTGAAAATAATGTTGAAACGTCACCAGGAGACGTGTGGCAAGTCGCCACCGAAATCGCCAATGAAAGAGTTGCTAGTATCTTTAGAGCCGATCGATTCGGAGGCTAAACATGGAAACAAGATTGATTGCGAAATGTGCGCAGCGAAGTTTAAAACTATAGAAAACTTGGAGAAGCACATGAGGGTAGTGCACGCGGCCGTCCTCAAACGAGACAAACGTGGTGAACAAAATGTGACCAATGGGAAGATCACCTTCCCCTGTTACTACAAATGTGGTCAGTCTTATGACGACTATTATATGTACACCAAACATTTCGAGTCCTGTCCCGATAAGAACGACACCATCATATTCACTTGCCCCTTGTGCCAGAAAGTGGTAACGAAAAAGAGTTCTTATTTTatccatataaaaaatatccatttCAATTATCATAGTGGTAATAGTGCGGGAACTTCTAGGGAATCATTTGATTGTCGAATATGCAGTAAAAAATTGACGACACAAAATCTGCTGATCTCTCACCTCGCCGCGCACATGTCtaacgacgacgacgacgacgttGGTGACAGGGTCTCCAGGGTAGGTGAATGTGAAGAAGACAATGAGCCCCAATACAGCAGCTCACATGTTTCTAGTGGGCCGCTAAAATGTAGCATGTGCGAAAAACGGTTTACATATAAGAAGGCTCTGGTCACTCACGAGCAGAAACATCTTGCCGGCGACATACAGATAAAGACAGAGCCGCTTGAAAAAAACGAGTCCAGTAATAGTTTGCTTAGCGAGTCCCATCATCAATCCGAGTCAGAATCTAGTCAGGAAGAAGGTGACGATAACACGTGTGATATCTGCGAGAAACAGTTCTCCTACAGACGTCTGCTAATCCACCACAAGCGCACCAAACACAACATGAGCTCGGGCACGAAGCGAGCTAAGATCAACCTCAAAGATTGCTCCGTCCGTTGTCTAATTTGTGACATTGAAATGAAAGTGAGCGCTATAAACGAACATAACCAGAAGCACACGTCGGTGAACATCAAACCCAGGAACCTGTATACTTGTGCGGAATGCGATGAGCAGTTCAAGAGCTGCAGCTCACTCGCTACTCACATCAAACTTGTACACAGGCTAAAGCAACCACATACGCCCAAGATGCACGGTGCAGATTTGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAACCCCTGGCCGAAGGCCAGATGCACAACGACTACGAAACGGTTCCGCCTTCACAAGAGGAGGACGGTCCGCTGGTCAATCTCAGCGGGTTCAACTGTCCAATATGCGGCAAAAAGATGCCGACGTTGATATCGCTGAAGAGGCACGTGAACTGGCATTCAAATTTCGGAAACAGTTTAGAAAAGAAGCTAGAGTGCTTTGTCTGCAAGGAGTCATTCCGGTTCCAATGCCACTACAAGTTGCACATGCGCGAACACTACAACGACCCGAACCTGGACCCGGCGCTGCTCACCTGCACTATATGCAACCGCAAGAGCAAACATCTCCGCGCGGCCAAAGCGCACATGAACTTCCACAAACAGACGCGCTTCAAGAGCAAAGACTACCAATGTTCCATTTGCAAGAGGATTTTCCAATATAGGAAAGTTTATCTCTCGCACATGGCAATACATTACAAGCGCGGCGAGAGCGTCAACTCAGTCGTCGGCGTCGTGTTACCCACCACCGCAGACAAGACCGTTTTCGACGGCACACATACCTGCCACCACTGCGGCAAAGTGTGCGACTCCGAAGTCTCATTGAAGCATCACATAATATGGCACAAGTCGAAGACCTCGCTATTCGGCGCCCGCCACGAATGCCACATTTGCGGCATACAATTTACTAATAAGAAAAGGCAGGAACTTCACATCAGAACTCACTATGAGGATGATAATGGCCCGTACAAATGTCCCATTTGTGGCAAGGGTTTCATTGATGAAGTCTATCACAAAAGGCACGTAAGAAGTCACAATTTTGACCATCAGTCACATAGAACGAGGATTGAGAATCTTCGGAAAGATAAAGTGAAATGTCCTATTTGTACTCGTTACTACCCGGATTTGGTAAAGCTGATACGCCATTTGCGACGAACGCATCCCGAGAGCAAAATGATTAAGTCTGATCCTGATGCTCCTCCCAAGAATTACTTATCATGCAAACTGTGTGCTAAAGTCTTTTTAGACCAACGAAGGTTACAACAACACGAGGAGGCCCATTTGAGGAAGCCGGAATTCCTCAAATGCAAATTCTGTGGCAAGAAGACTATCTCCTTGAAAAACCATAGAATCCATATTAAAGCTCATCTGACCCAAAAGTATACTAATGAACCACTTAAGTGTATGCACTGCGAGGAAACTTTCATGAGAGGCTACGACCTGCACCACCACTTGCGCGACGCGCACAACATCAACGAGACTTGGATAGCGGAGCGCACTGAGAAGAAACTTACCGGGCCATTGAAAGATTTGCAATGCTCCATTTGCCTCAAGGTATTAGCTAACAAAGGTAACTTTGAGCGGCACATCGATTACCACAACTCGCTGAGGTGTAATTACTGCTTCGATTACTTCAGCTCGCTCAGGTTCTTGGAGGGTCACCTCGCTTTTAGTTGTGAAAAGAAAAAGTTGATCGGCGACACGGAGGTGTATCCAAAGAAAATTAACTGCCACGTTTGTTACAAAGCGTTTCATTTGCAAGTGAAACTGGATTGTCATTTGCGAATTCAACACGGCGTCAGGGTCAGTAAAGAGGAGTCCGAGGGCAAGAAAGACTTTGTCTGCGACTACTGCTTTAAAGTGTTCGAGAACGAGTACGCTTTGGGCACACACAAGATTTACCATCGCACGATAGGATATTACGGTTGCATGTATTGCAACCGGAAGTTCAACACTATAACTATGTACAATAAACACAAGAATCATCACTTGTCACAACACAACGTCGACAGCCCGACCAAATGCGAGCACTGCGACCAGACATTCGTCGCGTTCAGGGAGATGATCTATCACATGAGAGATGCGCACGGCGATGATAAGGAATGGATTACAATGCCCAAGGAGTCAATTGAAGAGAAGTGCCATATTTGcaacaaaattttctttaacCTCCACAAGCATCTGGCATACCACGAAGAGAATAAATGCAAAAAGTGCTCGGAGTACTTCTTCTCACAAATCGATTACGACAACCATCTGTGCGCGATAGAGAGTGACGAAGAAATGGAGGAGAATAATGAAACCGACCAGCGGCCGAAGTACACCGAATGTGAATTTTGTTTCAAGCCTACGACAAAGAAGAACTCTAAGCGGCTGCATGATCACATACACAAGGTCTCCGGCGCGATCTCGTGCCGCTTCTGTTCGTTCAAATTTAAAACCATGGACGCGTTCAACATCCACGCGTTCTCCCACCGAAGTAGGAAATATGACAAGAAACCGATAATTTGCCGACAGTGCGGCGAGAAGTTCGTCCGTTACGGGCCCTTCATAAGGCACATGAAGTCCGTGCACAAATCTAAACAGAAGATGCACTACCGCGCCGTGGTGAAGCCGGAGCCCTGCGCCATTTGCGGGGATCCCTTCCCAAACCTCCACAATCACTACCGTGCGCACCTGCAGAACCAATGCCAGTTGTGTAAGAAATACTTCACGTCCTCTAAACTCTTCTCATCCCACGAATGCGGCAAAGAGGATTCCGATCCAGCTAAAGTGTTCACGAGTGACGTGGACGTGGTGGCGCTAATTAACGCCTATACTCCCAAAGACGAGAAGGACGACGAGAAGTACTACGGGCACATTGATACTGAAGAGGACATTGTGGATGAGGAAACAAATAATCGTGAGGCTGAGTACATGACTCAAGATGATGAGAGTCAAAATTCTACAGACCTTAATATGCACATGATGGTTCACACACCGATCATATCCGATGTGCTATCACTCTATCAGCAAAAGGAAGATAATGATGAGAATTCTAATAACGTTGTGAACCTGACCGACGAGGAGAGCTTGGATGGTGAGAGAATAGTAACTGTTATAAcgattgatgatgattga
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKVFEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSSIPSPSNRQSSDSAFSNHTDISSNNKLISATENKISPGIRRRKRSVQSNDNVSTSSQSHDYRPSSSKRVEELRSSEKKPRASVNTPSMDSDYDDYSISQFSGETDSDEPLTKSEFKCKVCGKGFASKLSVNAHSKVHSRKSLKQNALVNIPQPVSAINFEDATDVEDKLTCDKCERTFKLKIMLKRHQETCGKSPPKSPMKELLVSLEPIDSEAKHGNKIDCEMCAAKFKTIENLEKHMRVVHAAVLKRDKRGEQNVTNGKITFPCYYKCGQSYDDYYMYTKHFESCPDKNDTIIFTCPLCQKVVTKKSSYFIHIKNIHFNYHSGNSAGTSRESFDCRICSKKLTTQNLLISHLAAHMSNDDDDDVGDRVSRVGECEEDNEPQYSSSHVSSGPLKCSMCEKRFTYKKALVTHEQKHLAGDIQIKTEPLEKNESSNSLLSESHHQSESESSQEEGDDNTCDICEKQFSYRRLLIHHKRTKHNMSSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQKHTSVNIKPRNLYTCAECDEQFKSCSSLATHIKLVHRLKQPHTPKMHGADLADFCEVVVTKAEPLAEGQMHNDYETVPPSQEEDGPLVNLSGFNCPICGKKMPTLISLKRHVNWHSNFGNSLEKKLECFVCKESFRFQCHYKLHMREHYNDPNLDPALLTCTICNRKSKHLRAAKAHMNFHKQTRFKSKDYQCSICKRIFQYRKVYLSHMAIHYKRGESVNSVVGVVLPTTADKTVFDGTHTCHHCGKVCDSEVSLKHHIIWHKSKTSLFGARHECHICGIQFTNKKRQELHIRTHYEDDNGPYKCPICGKGFIDEVYHKRHVRSHNFDHQSHRTRIENLRKDKVKCPICTRYYPDLVKLIRHLRRTHPESKMIKSDPDAPPKNYLSCKLCAKVFLDQRRLQQHEEAHLRKPEFLKCKFCGKKTISLKNHRIHIKAHLTQKYTNEPLKCMHCEETFMRGYDLHHHLRDAHNINETWIAERTEKKLTGPLKDLQCSICLKVLANKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLIGDTEVYPKKINCHVCYKAFHLQVKLDCHLRIQHGVRVSKEESEGKKDFVCDYCFKVFENEYALGTHKIYHRTIGYYGCMYCNRKFNTITMYNKHKNHHLSQHNVDSPTKCEHCDQTFVAFREMIYHMRDAHGDDKEWITMPKESIEEKCHICNKIFFNLHKHLAYHEENKCKKCSEYFFSQIDYDNHLCAIESDEEMEENNETDQRPKYTECEFCFKPTTKKNSKRLHDHIHKVSGAISCRFCSFKFKTMDAFNIHAFSHRSRKYDKKPIICRQCGEKFVRYGPFIRHMKSVHKSKQKMHYRAVVKPEPCAICGDPFPNLHNHYRAHLQNQCQLCKKYFTSSKLFSSHECGKEDSDPAKVFTSDVDVVALINAYTPKDEKDDEKYYGHIDTEEDIVDEETNNREAEYMTQDDESQNSTDLNMHMMVHTPIISDVLSLYQQKEDNDENSNNVVNLTDEESLDGERIVTVITIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00180671;
90% Identity
iTF_01496743;
80% Identity
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