Basic Information

Insect: Pharmacophagus antenor
Gene Symbol: -
Assembly: GCA_018245475.1
Location: DWQX01004380.1:627-9021[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 6.9e-06 0.0013 20.7 0.4 1 23 204 226 204 226 0.98

2 28 0.00043 0.078 15.1 0.7 2 22 259 279 258 279 0.93

3 28 1.6e-05 0.0029 19.5 0.3 2 23 310 332 309 332 0.96

4 28 0.00025 0.045 15.8 0.8 1 23 384 407 384 407 0.97

5 28 0.0019 0.36 13.0 0.4 1 23 424 446 424 446 0.96

6 28 0.00038 0.07 15.2 1.7 2 23 483 504 482 504 0.97

7 28 4.7e-05 0.0086 18.1 2.2 2 23 546 568 546 568 0.97

8 28 3.7e-05 0.0068 18.4 1.2 1 23 618 641 618 641 0.97

9 28 0.011 2 10.6 0.2 1 23 698 720 698 720 0.97

10 28 0.49 90 5.4 6.3 2 23 732 753 731 753 0.96

11 28 0.082 15 7.9 2.3 2 23 765 786 764 786 0.96

12 28 0.006 1.1 11.4 1.1 1 23 796 818 796 818 0.98

13 28 0.0048 0.87 11.8 8.5 1 23 846 868 846 868 0.96

14 28 3.3e-05 0.006 18.6 1.6 1 23 879 901 879 901 0.98

15 28 0.007 1.3 11.2 0.8 1 23 909 931 909 931 0.95

16 28 0.0012 0.23 13.6 0.1 2 23 951 973 950 973 0.97

17 28 1.2 2.2e+02 4.2 1.0 1 23 991 1013 991 1013 0.91

18 28 0.063 12 8.2 4.6 1 23 1020 1042 1020 1042 0.98

19 28 0.0067 1.2 11.3 5.9 2 23 1053 1075 1052 1075 0.95

20 28 0.00035 0.065 15.3 0.8 2 23 1098 1119 1097 1119 0.95

21 28 7.5 1.4e+03 1.7 5.9 2 23 1162 1184 1161 1184 0.94

22 28 0.047 8.5 8.6 1.5 2 23 1200 1221 1199 1221 0.92

23 28 0.75 1.4e+02 4.9 3.3 5 23 1231 1249 1228 1249 0.94

24 28 0.014 2.6 10.3 0.8 2 23 1260 1282 1259 1282 0.95

25 28 4.5 8.2e+02 2.4 6.1 2 23 1299 1317 1299 1317 0.88

26 28 0.6 1.1e+02 5.2 1.3 2 23 1390 1411 1389 1411 0.93

27 28 0.00042 0.077 15.1 0.4 2 23 1422 1444 1421 1444 0.96

28 28 0.93 1.7e+02 4.5 3.5 2 20 1482 1500 1481 1502 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	6.9e-06	0.0013	20.7	0.4	1	23	204	226	204	226	0.98
2	28	0.00043	0.078	15.1	0.7	2	22	259	279	258	279	0.93
3	28	1.6e-05	0.0029	19.5	0.3	2	23	310	332	309	332	0.96
4	28	0.00025	0.045	15.8	0.8	1	23	384	407	384	407	0.97
5	28	0.0019	0.36	13.0	0.4	1	23	424	446	424	446	0.96
6	28	0.00038	0.07	15.2	1.7	2	23	483	504	482	504	0.97
7	28	4.7e-05	0.0086	18.1	2.2	2	23	546	568	546	568	0.97
8	28	3.7e-05	0.0068	18.4	1.2	1	23	618	641	618	641	0.97
9	28	0.011	2	10.6	0.2	1	23	698	720	698	720	0.97
10	28	0.49	90	5.4	6.3	2	23	732	753	731	753	0.96
11	28	0.082	15	7.9	2.3	2	23	765	786	764	786	0.96
12	28	0.006	1.1	11.4	1.1	1	23	796	818	796	818	0.98
13	28	0.0048	0.87	11.8	8.5	1	23	846	868	846	868	0.96
14	28	3.3e-05	0.006	18.6	1.6	1	23	879	901	879	901	0.98
15	28	0.007	1.3	11.2	0.8	1	23	909	931	909	931	0.95
16	28	0.0012	0.23	13.6	0.1	2	23	951	973	950	973	0.97
17	28	1.2	2.2e+02	4.2	1.0	1	23	991	1013	991	1013	0.91
18	28	0.063	12	8.2	4.6	1	23	1020	1042	1020	1042	0.98
19	28	0.0067	1.2	11.3	5.9	2	23	1053	1075	1052	1075	0.95
20	28	0.00035	0.065	15.3	0.8	2	23	1098	1119	1097	1119	0.95
21	28	7.5	1.4e+03	1.7	5.9	2	23	1162	1184	1161	1184	0.94
22	28	0.047	8.5	8.6	1.5	2	23	1200	1221	1199	1221	0.92
23	28	0.75	1.4e+02	4.9	3.3	5	23	1231	1249	1228	1249	0.94
24	28	0.014	2.6	10.3	0.8	2	23	1260	1282	1259	1282	0.95
25	28	4.5	8.2e+02	2.4	6.1	2	23	1299	1317	1299	1317	0.88
26	28	0.6	1.1e+02	5.2	1.3	2	23	1390	1411	1389	1411	0.93
27	28	0.00042	0.077	15.1	0.4	2	23	1422	1444	1421	1444	0.96
28	28	0.93	1.7e+02	4.5	3.5	2	20	1482	1500	1481	1502	0.93

Sequence Information

Coding Sequence: ATGGCCCTCAAGCTCGGAAAATGTAGGCTTTGCCTCAAACTGGGCGATTTCTATTCCATCTTTACGGTGGATAACAATCTACAGCTCGCGGAGATGGTGATGGAATGCGCTCGAGTAAAGGTATTCGAAGGCGACGGTCTACCTGATAAGATTTGTTCCGAGTGCATCCAAAAGCTTAGCAGCGCGCATATCTTTAAACAGCAGTGCGAGAGGTCCGATCAAGAACTTAGACGCAACTATTTACCGCCACCGGGTTTCAGCAGCATACCTTCACCACCGAATAGGCAAAGTAGTGACTCGGCATTCTCAAACCATACCGACATATCCAGCAACAACAAGCTCACGTCGTTGTCGACAGAGATTAAGATCTCGCCTGGAAGCCGAAGGCGGAAACATAGTCTGGAGAGCAACGACAATGCATCCACGAGTAGCCAATCGCACGACTTCCGGCCCACTTCCTCCAAGCGGGTCGCGGAGCTCCGCTCCTCTGAGAAAAGACAGAGGAAAACATTCAACAACGCCTCATCGATGGACTCCGATTACGACGACAACAGTGTGTCGCAGTTCTCCGGCGAGACCGACTCCGACGAGCCGTCGACGAAGAGCGAATTCAAATGCAAAATATGCGGCAAGGCGTTCGCGTCCAAGATGAGTGTGAACGCGCACACGAAGGTCCATGCCAGGAGGTCGCTGAAGCAGAACGCAGTGGTCGACATACCGCAACCGGTGGGCTGCGCGAGCATGGAGGACGCGGCCGACGTCGAGGACAAGTTGACTTGCGACAAGTGCGACCGGACGTTCAAGCTGAAGATAATGTTGAAGCGGCACCAGGAGACGTGCACGAGAACACCGCCCAAGTCGCCCATGAAGGAGCTGCTGGTGTCACTGCAGCCGATAGACGCGGGGACCAAACAGGGGATCAGGATCGAATGCGAAATGTGCACCACTAAGTTCAAAACTATCGAGAACTTGGAGAAGCACATGAGGGTGGTGCACGCGGCCGTGCCGAAGCGGGAGAAGCGCGAGCATAGCGCGGTCAATGGGAAGATCGCCTTCCCCTGCTACTACCGTTGCGGGCAGGCCTACGACGACTACTACGTATACACGAAACACTTCGACGTATGCCCCAATAAGGACGACACAATCACGTTTACATGCCCCTTATGCCAGAAAGTGGTGACGAAGAAGAGTTCCTATTTCATCCACATCAAGAACATCCATTTCAATGTCCATTGCGGCAATAGCGCTGGGCTTGCTCCTAGGGAAACGTTCGAGTGTCGAATATGCAGTAAGAAATTGACGACGCAAAATCAACTGGTCACGCACCTCGCCGCTCACATGTCCAACATCGACGACGACGATATCGTCGACGATGGCTCTGGGATAGGTGAGATCGAAGACAATgagccggaatacagcagctCTCACGTCACTAGCGGACCGCTAAAATGTAGCATGTGCGAAAAGCGGTTCACGTACAAGAAAGCCCTGGTTACCCACGAGCAGAGACACCTTACCGGTGACATACAGATAAAGACAGAGCCCGTTGAGAAGAACGAGTCCAGTAATAATTTGCTGAGCGAGTCCCACCACCAGTCCGAGTCTGAGTCTAGTCAGGATGAAGGCGACGATAACACGTGCGACATCTGCGAGAAGCAATTCTCTTATAAACGTCAACTCATCCAACACAGGCGCACCAAGCACAACTTGAGTTCGGGCACAAAGCGCGCGAAAATCAACCTTAAAGACTGCTCCGTGCGTTGTCTGATATGCGACGTGGAAATGAAGGTGAGCGCGATAAACGAGCACAATCAGAAGCACATATCGGTGAGCATGAAGCCGCGGAACCTGTACACGTGCGCGGAGTGCGACGAGAAGTTCAAGAGCTGCAGCTCGCTGGCCACGCACATCAAGCTGGTGCACCGGCTGAAGCAGCCGCAGGAGCCCAAGGTGCAGCCGGCGGATCTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCCCTGGCCGTTGGTCAGATTCACAACGACTTCGTGACGGTTCCGCCGGCGCCGGAGGGCGAGGACCCGTTGGTCAACATCAGTGGGTTCACCTGCCCGATATGCAGCAAGCAGATGCCGAGCTTGATATCGCTGAAGAGGCACGTCAACTGGCACTCGAACGTCGGCAACCTCATCGAGAAGACGCTCGAGTGCTTCGTCTGCAAGGAGTCGTTCCGGTTCCAGCGCCACCACCGCCTGCACATGCGCAATCACTACAACGACCCAAACCTGGACCCGGCGCTGCTCACGTGCACCATATGCAACCGCAAGAGCAAGCACCTGCGCGCCGCCAAGGCACATATGAACTTCCACAAGCAGACGCGCTTCAAGAACAAAGACTATCAGTGCTCCATATGCAAGAGGGTCTTCCAGTTCAGGAAGGTTTACCTCTCCCACATGGCGATACACTACAAGCGCGGCGAAAGCGTCGGCTCGGTCGTGGGCCATGTGCTCCCGAACACGGCCGACCGGAGCATGTCCGACGGCACGCACACCTGCCACCACTGCGGCAAGGTTTGCGACTCCGAGAACTCACTGAAGCATCATATAATATGGCACAAGTCGAAGAACTCGCTGTTCGGCGCCCGGCACGAGTGCCAAATCTGCGGCGTACAATTCACGAACAAGAAAAGGCTGGAGCTTCACATACGAACACATTACGAGGACGACAACGGCCCGTACAAATGCCCGATTTGTGGCAAGGGCTACATCGACGACGGCTACTGCAAGAAGCACGTGAAAGGCCACAATTTCGACCATCAGTCGCATAAGACGAGGATAGAGAATCTGCGGAAAGATAAAGTCAAGTGTCCGATTTGCGCTCGCTTCTACCCGGACTTAGTGAAGCTGATACGTCATTTGCGACGAACGCATCCCGAGAGCAAAATGATCAAGCCGGATCCGGACGCGCCCCCACAGAACTACTTCTCGTGTAAGCTGTGCGCTAAGGTGTTCTTGGACGAGAGAAGGTTGCAGCATCACGAGGAGGCTCACTTGCGGAAGCCCGAGTTCTTTAAATGCAAGTTCTGCGGCAAAAAGACGATATCGTTGAAAAATCATCGAGTGCACATTAAATCGCACCTGACCCAGAAGTATATCGACGAACCGCTGAAGTGCATGCACTGTGACGAGACGTTCACGAGGGGCTACGATCTGCATCACCACTTGCGCGACAAACACGGCATCAACGAGACCTGGATAGCGGAGCGCACGGAGACGAAGCTCAGCGGGCCGTTGCAAGACTTGCAGTGCTCCATTTGCCACAAGATATTAGCTAACAAAGGGAACTTTGAGCGGCACATCGATTACCACAATTCACTGCGGTGCAATTACTGCTTCGATTACTTCAGCTCGCTCCGGTTCTTGGAGGGTCACCTCGCGTTCAGCTGTGAGAAGAAAAAGTTGATTGGCGACACCGAGGTTTACCCGAAGAAAGTGAAGTGCCACATTTGTTACAAAGCTTTTCATTTACAAGTGAAATTGGACTGCCATTTGCGAACTCAACACAGTGTCAAAGTTTGTAAGGAGGAATCCGAAATGAAGAAGGACTCCGTTTGCGACTACTGCTTCAAAGTATTCGAGAACGAGTGTGCTTTGAGTACACACAAAGTCTACCACCGCACGGTGGGATATTACGGCTGCATCTATTGCAACAGAAAGTTCAGCACCATCACGGGGTACAGGAAACACAAGAATCACCACTTCTCACAGCACAACGTCGATAGCCCCTCTAAATGCGAGCACTGCGACGAGACTTTCGTCGCGTTCAGAGAGATGATCTACCACATGAGGGACGAACACGGCGACGACAAGGAATGGATAGTAATGCCCAGAGAATCCACGGAAGAGAAGTGCCATATATGCGAGAAAGTTTTCTTCAACCTCCACAAGCATCTGACATATCACGAAGAGAATAGGTGCAAGAAGTGCTCGGAGTACTTCTTCTCCACGATCGACTACGACAACCACCTGTGTGCCATCGAGAGCGAAGAGGAAGCCGACGAGAGCAACGAAACGGACCTGCGCCCTACGTACACCGAGTGCGACTTCTGCTTCAAGCCAACGACTAAGAAGATCTCGCAGCGGCTGCACGACCACATACACAAGGTCTCCGGCGCGATCTCATGCCGGTTCTGTTCGTTCAAGTTTAAAACAATGGACGCGTTCAACATACACGCTTTCTCGCATCGCAGCAGGAAGTACGACAAGAAGCCGATCAAGTGCCGGCAGTGCGGCGAGAAGTTCGTGCGCTACGGGCCGTTCATACGGCACATGAAGTCCGTGCACAAGTCCAAGCAGAAGATGCACTACCGCGCCATGGTTAGACCGGAGCCTTGCGTTGTCTGCGGCGACGCGTTCCCCAACCTCCACAACCACTACCGAGCGCACCTGCAGAACCAGTGCCAGCTGTGTCGCAAGTACTTCACTTCCTACAAACTCTTCTCGAAGCACGAGTGCGATAAAGAAGACTCCAATCCGTCTAAAGTGTTCACGAGCGACGCGGATCTTTTGGCGCTCATTAACGCCTACACGCCCAAGGACGAAAAGGACGACGAGAAGTTCTACGGGCACACCGATAACGAAGATGCGGAGATTGCAGAAGAGGGAACCAATCTTGAAATGGGTTACATGATACAGGATGATGTAAGTCAAAACTCTACGGACCTCAACATGCACATGATGGTACACACCCCAATCATATCTGATGTGTTATCACTCTACAATAAACAGGAAGAGAATGCAAGTATGATTCCTGAAAATGTTGTCAGCTTGACACACGACAGCTTGGAGAGTGAAGTGGTTACTGGTGTTGTAACAATTAATGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNNLQLAEMVMECARVKVFEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYLPPPGFSSIPSPPNRQSSDSAFSNHTDISSNNKLTSLSTEIKISPGSRRRKHSLESNDNASTSSQSHDFRPTSSKRVAELRSSEKRQRKTFNNASSMDSDYDDNSVSQFSGETDSDEPSTKSEFKCKICGKAFASKMSVNAHTKVHARRSLKQNAVVDIPQPVGCASMEDAADVEDKLTCDKCDRTFKLKIMLKRHQETCTRTPPKSPMKELLVSLQPIDAGTKQGIRIECEMCTTKFKTIENLEKHMRVVHAAVPKREKREHSAVNGKIAFPCYYRCGQAYDDYYVYTKHFDVCPNKDDTITFTCPLCQKVVTKKSSYFIHIKNIHFNVHCGNSAGLAPRETFECRICSKKLTTQNQLVTHLAAHMSNIDDDDIVDDGSGIGEIEDNEPEYSSSHVTSGPLKCSMCEKRFTYKKALVTHEQRHLTGDIQIKTEPVEKNESSNNLLSESHHQSESESSQDEGDDNTCDICEKQFSYKRQLIQHRRTKHNLSSGTKRAKINLKDCSVRCLICDVEMKVSAINEHNQKHISVSMKPRNLYTCAECDEKFKSCSSLATHIKLVHRLKQPQEPKVQPADLADFCEVVVTKAEPLAVGQIHNDFVTVPPAPEGEDPLVNISGFTCPICSKQMPSLISLKRHVNWHSNVGNLIEKTLECFVCKESFRFQRHHRLHMRNHYNDPNLDPALLTCTICNRKSKHLRAAKAHMNFHKQTRFKNKDYQCSICKRVFQFRKVYLSHMAIHYKRGESVGSVVGHVLPNTADRSMSDGTHTCHHCGKVCDSENSLKHHIIWHKSKNSLFGARHECQICGVQFTNKKRLELHIRTHYEDDNGPYKCPICGKGYIDDGYCKKHVKGHNFDHQSHKTRIENLRKDKVKCPICARFYPDLVKLIRHLRRTHPESKMIKPDPDAPPQNYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKSHLTQKYIDEPLKCMHCDETFTRGYDLHHHLRDKHGINETWIAERTETKLSGPLQDLQCSICHKILANKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLIGDTEVYPKKVKCHICYKAFHLQVKLDCHLRTQHSVKVCKEESEMKKDSVCDYCFKVFENECALSTHKVYHRTVGYYGCIYCNRKFSTITGYRKHKNHHFSQHNVDSPSKCEHCDETFVAFREMIYHMRDEHGDDKEWIVMPRESTEEKCHICEKVFFNLHKHLTYHEENRCKKCSEYFFSTIDYDNHLCAIESEEEADESNETDLRPTYTECDFCFKPTTKKISQRLHDHIHKVSGAISCRFCSFKFKTMDAFNIHAFSHRSRKYDKKPIKCRQCGEKFVRYGPFIRHMKSVHKSKQKMHYRAMVRPEPCVVCGDAFPNLHNHYRAHLQNQCQLCRKYFTSYKLFSKHECDKEDSNPSKVFTSDADLLALINAYTPKDEKDDEKFYGHTDNEDAEIAEEGTNLEMGYMIQDDVSQNSTDLNMHMMVHTPIISDVLSLYNKQEENASMIPENVVSLTHDSLESEVVTGVVTIND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00180671;
90% Identity: -
80% Identity: -