Aver000889.1
Basic Information
- Insect
- Asbolus verrucosus
- Gene Symbol
- retn
- Assembly
- GCA_004193795.1
- Location
- QDEB01008070.1:10678-15981[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 4.2e-14 52.4 0.1 29 89 4 62 1 62 0.93 2 2 2.5 6e+03 -2.6 0.0 25 38 200 213 160 216 0.64
Sequence Information
- Coding Sequence
- ATGGCCAAATCAGTTCTGGATCTCTATGAATTGTACAACCTTGTGATTGCGCGAGGTGGACTTGTCGAcgttataaataagaaactgTGGCAGGAAATTATCAAAGGATTACACTTGCCATCTTCGATAACTTCAGCAGCCTTCACATTACGAACACAgtaCATGAAGTATTTGTACCCCTACGAGTGCGAAAAACGTCGATTAAGCACTCCAGCGGAACTGCAAGCTGCTATAGATGGTAATCGCCGAGAGGGCCGCCGCAGTAGTTATGGTCAGTACGACTCTATCCAGCGTTCTCCGAATCCATCTCAAATGTCACCCTTATCACTAGTTTCACAACAGCAACAGTTAGCTGCTCGTATGAACTCTGTTATGAGTGGTGGAATCGGCCTCCATAACGGTGCTCATCATCCAAGTCATCCCCAACCTCTGGGTCAACCTTTGAATGGTGGGCCTTTACCCGGATTAGCTCCTAGCGAGTTCGAAGCACGTATGATGGAATACGTGAAACTACTCAATAAGGAAATCCGTAGTTCGGCGGTGACACCTCCACGACAGGGAGATGTGTCGCCGCCAAATGCCACCTCCCCTCTCAATCAACTGGAAATGTCTCGGATGACTTTGTGGAATTTGTATAATAACAATCAAACACCAGTTGAACCTCAAAAGGAGGCCCTCAACTTGTCGGATCCGACGCAACCCTCAGTTAAGCGTGAACCCGAACACAGGGATTCACCGCCGCCTTCTAAAAAGTTCTCCAAAGACGATGACGAACATAAGCAGATTACACCCGCCACacatatcaaaataaatagcaGAGtttttgat
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDSIQRSPNPSQMSPLSLVSQQQQLAARMNSVMSGGIGLHNGAHHPSHPQPLGQPLNGGPLPGLAPSEFEARMMEYVKLLNKEIRSSAVTPPRQGDVSPPNATSPLNQLEMSRMTLWNLYNNNQTPVEPQKEALNLSDPTQPSVKREPEHRDSPPPSKKFSKDDDEHKQITPATHIKINSRVFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_01480641; iTF_00752731; iTF_00870345; iTF_00414842;
- 80% Identity
- -