Gcor001224.2
Basic Information
- Insect
- Gnatocerus cornutus
- Gene Symbol
- retn
- Assembly
- GCA_029298725.1
- Location
- CM055509.1:26519891-26523166[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-20 1.1e-16 61.3 0.0 17 89 10 80 5 80 0.94
Sequence Information
- Coding Sequence
- ATGTTTATATCTTCTGTATTCATATCCGGTACTCCAATCAATAGACTGCCAATAATGGCCAAATCTGTTTTGGATCTCTACGAATTGTACAACTTAGTTATTGCCAGAGGAGGACTCGTCGATGTGATTAATAAGAAATTGTGGCAAGAAATTATCAAAGGCCTGCACTTACCGTCTTCGATAACGTCGGCAGCTTTCACACTGAGGACGCAATATATGAAGTACTTATATCCTTACGAGCACGAAAAGCTCAAACTAAGCACTCCTGCCGATCTCCAAGCCGCCATCGACGGTAACCGTCGAGAAGGTCGTCGAAGTAGTTATGGTCAATACGACACAGTACAACGTTCTCCGAACTCTTCCCAAATGTCACCCTTATCTTTGGTCTCACAACAACAACAGTTAGCTGCCCGCATGAATTCAGTAATGACCGGAGGTATAGGTTTGCATAACGGCGCCCATCATCCAAGTCATCCGCAGCCTTTGGGCCAACCTTTGAATGGTGGGCCTTTACCAGGTTTGGCGCCTAGTGAGTTTGAGGCGCGTATGATGGAATATGTGAAACTCCTCAATAAAGAAATAAGAAGTTCAGCAGCAACTCCTCCGAGACAGGGTGATATTTCACCGCCTAATGCGACTTCACCGTTTAATCAGTTGGAGTTGTCGCGGATAACGTTGTGGAATATGTATAATAATAACCAACCGCCAGTAGAACCACAGAAAGAGGCACTTAATTTGTCGGAACCCGCACAACCTTCGATTAAGCGGGAGCCGGAACACAGAGATTCACCTCCGCCTCCGAAGAAATTCTCCAAAGATGAAGATGATCATAAATCTATCTCACCTGCCACGCATATCAAGATTAACAGTAGAGGGGATGCACGTAACGGAGACAGTTCCTTAGTAGTGAGTATGGAATTAAACGGAGTCACATATCAAGGTGTATTATTCGCACAGTCTTCGCCCTCTAGTGGTAGAGCCGCTTTAGCTTCGTAA
- Protein Sequence
- MFISSVFISGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYEHEKLKLSTPADLQAAIDGNRREGRRSSYGQYDTVQRSPNSSQMSPLSLVSQQQQLAARMNSVMTGGIGLHNGAHHPSHPQPLGQPLNGGPLPGLAPSEFEARMMEYVKLLNKEIRSSAATPPRQGDISPPNATSPFNQLELSRITLWNMYNNNQPPVEPQKEALNLSEPAQPSIKREPEHRDSPPPPKKFSKDEDDHKSISPATHIKINSRGDARNGDSSLVVSMELNGVTYQGVLFAQSSPSSGRAALAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_00167481;
- 80% Identity
- -