Cang000982.2
Basic Information
- Insect
- Cynaeus angustus
- Gene Symbol
- retn
- Assembly
- GCA_030157275.1
- Location
- CM058058.1:13989603-13995241[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-20 6.4e-17 62.0 0.1 16 89 30 101 12 101 0.93
Sequence Information
- Coding Sequence
- ATGAAAAGCTGGTCTGCCTCAAAACTGCAGGTCCATCAGTCTTATAATATGCAGTATTATTTATTCGTTGGGTGTGAAATCTGGTGCAATGGTACTCCAATCAATAGACTGCCGATAATGGCCAAATCTGTTTTGGATCTCTACGAATTGTACAATTTAGTTATTGCCAGGGGAGGACTCGTTGATGTtattaataagaaattatggcaagaaattataaaaggtCTACACTTACCGTCTTCGATAACGTCGGCAGCTTTCACACTAAGAACAcaatacaTGAAGTACTTATATCCTTATGAACATGAGAAACTTAAACTAAGCACTCCTGCTGATCTCCAAGCCGCTATCGATGGTAACCGCCGAGAAGGTCGTCGAAGCAGTTATGGTCAATACGACACAGTACAACGTTCCCCAAACTCTTCTCAAATGTCACCCCTATCTTTGGTCTCACAACAACAACAGTTAGCTGCCCGCATGAATTCAGTAATGAGCGGTGGTATAGGTCTGCATAACGGCGCCCATCATCCAAGTCATCCACAGCCTTTAGGCCAACCTTTAAATGGTGGACCTTTGCCAGGTTTGGCGCCTAGTGAGTTTGAGGCACGGATGATGGAATATGTAAAACTtcttaataaagaaataaggAGTTCTGCAGCAACTCCTCCAAGACAAGGTGACATTTCACCACCAAATGCAACTTCACCATTTAATCAACTAGAGTTGTCTCGGATAACGTTGTGGAATATGTATAATAATAACCAAACGACAGTAGAACCACAAAAAGAGGCACTTAATTTGTCGGAACCCGCACAACCTTCGATTAAGCGGGAGCCGGAACATAGAGATTCACCTCCTCCTCCGAAGAAATTCTCCAAAGATGAAGATGACCATAAATCTATCTCACCTGCCACGCATATTAAGATTAACAGCAGAGGGGATGCACGTAACGGAGACAGTTCCTTAGTAGTGAGTATGGAATTAAACGGAGTCACATATCAAGGTGTTTTATTCGCACAGTCTTCGCCATCTAGTGGTAGAACCGCTTTAGCTTCGTAA
- Protein Sequence
- MKSWSASKLQVHQSYNMQYYLFVGCEIWCNGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYEHEKLKLSTPADLQAAIDGNRREGRRSSYGQYDTVQRSPNSSQMSPLSLVSQQQQLAARMNSVMSGGIGLHNGAHHPSHPQPLGQPLNGGPLPGLAPSEFEARMMEYVKLLNKEIRSSAATPPRQGDISPPNATSPFNQLELSRITLWNMYNNNQTTVEPQKEALNLSEPAQPSIKREPEHRDSPPPPKKFSKDEDDHKSISPATHIKINSRGDARNGDSSLVVSMELNGVTYQGVLFAQSSPSSGRTALAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- iTF_00167481;
- 80% Identity
- -