Aplu085441.1
Basic Information
- Insect
- Anthophora plumipes
- Gene Symbol
- bab1
- Assembly
- GCA_951804975.1
- Location
- OX638112.1:34618216-34620944[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-18 7.2e-14 53.9 0.0 1 43 28 71 28 73 0.95 2 2 2.1 1.6e+04 -1.6 1.4 6 15 153 162 151 165 0.88
Sequence Information
- Coding Sequence
- ATGTGGCagaagtgctggaacaccaatcAAAGCCTGGTGCACAATCTACGTTTTCGCGAGCGTGGTCCGCTCAAGTCTTGGCGACCGGAAACCATGGCGGAGGCAATATTCAGCGTCCTGAAGGAAGGATTGTCCTTGAGTCAAGCGGCAAGAAAATACGACATCCCGTACCCGACGTTCGTGCTGTATGCTAATCGAGTGCACAATATGCTGGGACCGAGCGCCGATGGCGGAGCCGGTGAGTATCTACGCCCGAAAGGTAGAGGCAGACCGCAGAGGATTCTGTTGGGCGTGTGGCCGGACGAGCACATTCGCGGGGTGATCCGAGCCGTCGTGTTCCGCGACGGCCACTCTCCGCATATAGTGAAGGAAGAGCCAACTACGATGTACCCGAGTTTGGCCAATTACGCCGCCTGTAACGGACCCGAAGGCGCGGTCAGCCCCGGAGCAGCAGCCGCGGCCGCGGTCGCCGCGGTCGCTCAAGGACTGCGACATCAAATGTGCAGCATGGTAGCAGCGGCGCACTCGCAACAGCACGACATGATGGCGACGAATCTCTCGACGAATCTCTCGACGAATCTCTCGACGAGTCTGTCGTCGAATCTACAGGCAGCGATGCAGGCCAGCCAGCATCACCACAACAGCAACAGCGGCGTGCCGATAATCGGTAGCAACAACGGCAGCGGAGGCGGAAACAACGGCAATTCGCCTTTGAATTTAGGCTTAGCCAGTCCAGGCTCGGGTGGACCGCCCGAAAGCCCTATGGAGAGTCCTTTGGCGAGTCCTCTCGGTCCGTTAATGGATCCGGGACATATACCGAGTAGCGTAGAGGTCGGAATAGGCGTCAGTGGAATGACGTACAAACCAGCGCGAAGCTTCGTCAGCCCGAGGCCGGAGAATCTCTTCCAGGAGGACATCGCGGACCTCGTGAAGAGTCCCCACGGGCTTAAGGACAAGGATAAGATCCCCGTAAAGCTCGAGCCGTTGACGGACTCGCGTTGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPTTMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSTNLSTSLSSNLQAAMQASQHHHNSNSGVPIIGSNNGSGGGNNGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_01498114; iTF_00302947; iTF_00360131; iTF_00086084; iTF_00088698; iTF_01069573; iTF_01070278; iTF_01068203; iTF_01066162; iTF_01066861; iTF_00087849; iTF_01267466; iTF_01268938; iTF_01269708; iTF_01271114; iTF_00769547; iTF_01453995; iTF_00391212; iTF_00393516; iTF_00085202; iTF_01266802; iTF_00863191; iTF_00860301; iTF_00024539; iTF_00762470; iTF_00229947; iTF_00219715; iTF_00225155; iTF_00231235; iTF_00228581; iTF_00225831; iTF_00222440; iTF_00215627; iTF_00223791; iTF_00226513; iTF_00216306; iTF_00220499; iTF_00219030; iTF_00224472; iTF_00229272; iTF_00227194; iTF_00221181; iTF_00214942; iTF_00216991; iTF_00218335; iTF_00223104; iTF_00233147; iTF_01068892; iTF_01169086; iTF_00084447; iTF_00087019;
- 80% Identity
- -