Hsal007190.1
Basic Information
- Insect
- Harpegnathos saltator
- Gene Symbol
- bab1
- Assembly
- GCA_003227715.1
- Location
- NW:1223183-1251682[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-18 8.3e-15 53.7 0.0 1 43 68 111 68 113 0.95 2 2 2.2 2.6e+03 -2.3 1.8 6 15 193 202 191 204 0.88
Sequence Information
- Coding Sequence
- ATGTCTGACCCGAACTTTTCTGTTCTGTTTCAGGCCAAGTTGTTGGAGTCGTCCCACGCTTGGCTCGGCGCCTCCACCTCCAGTATAGCAGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAGAGTCTGGTGCACAACCTGCGCTTCCGGGAACGTGGACCCCTCAAGTCCTGGCGGCCCGAGACCATGGCGGAGGCGATCTTCAGCGTTCTCAAGGAAGGGCTTTCGCTCAGCCAAGCGGCAAGGAAGTACGACATCCCCTACCCGACGTTCGTCCTCTATGCGAATCGAGTGCACAACATGCTGGGTCCTAGCGCCGACGGCGGGGCCGGTGAGTATCTGCGCCCGAAGGGCAGAGGAAGACCGCAGAGGATTCTGCTAGGCGTCTGGCCGGACGAGCACATCCGCGGCGTGATTCGCGCGGTGGTGTTCCGCGACGGGCACTCGCCGCACATCGTCAAGGAGGAGCCGACCACGATGTACCCAAGCCTGGCGAACTACGCGGCCTGCAACGGCCCGGAAGGCGCGGTCagtcccggcgcggcggccgcagCCGCGGTCGCAGCGGTCGCTCAAGGTCTGCGACATCAGATGTGCAGCATGGTGGCGGCAGCGCACTCGCAGCAACACGACATGATGGCGACGAACCTGTCGACGAGCCTGTCCACCAGCCTATCGTCAAACCTGCAGGCGGCGATGCAAGCCAGCCAACACcacaataacaataacaacggCGGCAGCAACACGGGCGGCATCGGCGGCAGTAACAACGGCGGCGCCGGCAACAACAACGGCAACTCCCCATTGAATCTCGGCCTGGCGAGCCCGGGTTCGGGCGGGCCACCGGAAAGCCCGATGGAGAGCCCACTGGCGAGCCCGCTGGGCCCGCTGATGGACCCGGGTCACATACCGAGCAGCGTGGAGGTCGGCATTGGCGTGAGCGGTATGACGTACAAGCCGGCGCGGAGCTTCGTCAGCCCCCGGCCAGAGAATCTCTTCCAGGAGGACATCGCCGACCTGGTGAAGAGTCCGCACGGTCTCAAGGACAAGGACAAGATCCCGGTGAAGCTCGAGCCGCTCACGGACTCGCGTTGCGAATAG
- Protein Sequence
- MSDPNFSVLFQAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPTTMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTSLSTSLSSNLQAAMQASQHHNNNNNGGSNTGGIGGSNNGGAGNNNGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_00117918;
- 80% Identity
- -