Abic009495.2
Basic Information
- Insect
- Andrena bicolor
- Gene Symbol
- bab1
- Assembly
- GCA_960531205.1
- Location
- OY482665.1:13817275-13824729[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-17 1.3e-14 53.9 0.0 1 43 28 71 28 73 0.95 2 2 4.3 3e+03 -1.7 1.4 6 15 153 162 151 165 0.88
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAATCAGAGCCTGGTGCACAATCTGCGCTTCCGCGAGCGTGGCCCGCTCAAGTCTTGGCGACCGGAGACCATGGCGGAGGCAATCTTCAGCGTGCTCAAGGAGGGTCTGTCCTTGAGCCAAGCCGCCAGGAAATACGACATCCCCTACCCTACGTTCGTCCTCTACGCCAACCGAGTGCACAACATGCTGGGTCCAAGCGCTGACGGCGGGGCCGGTGAGTATCTTCGCCCGAAGGGACGAGGACGACCGCAGAGGATTCTACTAGGCGTCTGGCCCGACGAGCACATTCGCGGGGTGATCCGAGCCGTGGTGTTCCGCGACGGCCACTCCCCGCACATGGTGAAGGAAGAACCGACCTCCATGTACCCGAGCTTGGCAAATTACGCCGCCTGTAACGGGCCGGAAGGCGCGGTTAGCCCTGGAGCTGCAGCCGCAGCCGCGGTCGCCGCGGTCGCTCAAGGTCTCCGACACCAGATGTGCAGCATGGTGGCTGCGGCGCACTCGCAGCAGCACGACATGATGGCGACGAATCTCTCGACGAACCTCTCCACGAACCTGTCGACCAGCCTGTCGTCGAACCTACAGGCAGCGATGCAGGCCAGCCAGCATCAccacaacagcaacaacagcggCGGCCACGTGATCGGTAGCAACAACGGaagcggcggtggcggcggcggcgggaaCAACGGGAACTCACCACTGAATCTCGGCCTGGCCAGCCCAGGCTCCGGCGGCCCGCCGGAGAGCCCTATGGAGAGTCCCCTGGCGAGCCCCCTCGGTCCCCTGATGGACCCGGGGCACATACCGAGCAGCGTGGAGGTCGGCATAGGCGTCAGTGGAATGACCTACAAGCCGACGCGGAGCTTCGTCAGCCCGCGGCCGGAGAATCTCTTTCAGGAGGACATCGCGGACCTGGTGAAGAGCCCCCACGGGCTGAAGGACAAGGACAAGATCTCCGTGAAGCTGGAGCCGCTGACGGACTCGCGTTGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHMVKEEPTSMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSTNLSTSLSSNLQAAMQASQHHHNSNNSGGHVIGSNNGSGGGGGGGNNGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPTRSFVSPRPENLFQEDIADLVKSPHGLKDKDKISVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00227880;
- 90% Identity
- iTF_00117918;
- 80% Identity
- iTF_00087019;