Agra034935.1
Basic Information
- Insect
- Anoplolepis gracilipes
- Gene Symbol
- tfip11
- Assembly
- GCA_031304115.1
- Location
- JAPWJP010002648.1:340834-344918[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-102 6.6e-98 329.0 15.1 1 275 391 660 391 660 0.98 2 2 0.0062 93 3.8 0.3 245 272 675 702 667 705 0.88
Sequence Information
- Coding Sequence
- ATGTCTGAAGACGAAGTGGAAAGCTTTGAAATTACCGATTATGATTTAGATAATGAATTTAACATTGGTCGTCCCCGACGCAAGCTTTCGAAGAAGCAACAAATGCTAGGAATATGGGCAGATGACAGCGATGAAGATGAATTATCTGCTAGGCCATCTTTTAAGACTTTTAACAAGGGTCCTAAAAATTATACAGCACCAGTCAGTTTTGTTGCTGGTGGTATTCAACAAGCAGGGAAACCAAAGGATAAGGAAGATGATGACGACAAGGAAGATGAAGAAGAAACACGAGAATCTCAAACAAAACTTCATAGTGATTCTAGctCAGAAGATGAAAGACCAAATAGTTCAAAATCAcgtccctctttctctttaaatctAGATTGCGATATCGCGGGTCTGCGTAAAAAACGTAATCAAGTAAATCCATCATTAATGAAAAGTGGAATGGGTAGTTGGGAAGTACATACAAAGGGCATTGgtgctaaattattattacagatggGATTTGAACCTGGGAAAGGTTTGGGTAAACAGCTACAAGGAATAAGCACCCCAGTGGAAGCACATTTAAGAAGGGGAAGAGGTGCGATTGGTGCATATGGGCCAGAAAAGGTACCAAAAAttccagaaaaaaagaaagatgaagATGGAGACGAAGCAAAAGATTCCAAATCAAAAGTATCTCAATGGCGAAAGGGCGATAacagtaataaaaagaaagttagATACTGTTATAGAAGTGTAGATCAGGTTTTAGAAGATGGAAAGTTGAAACCTAATAGAAAGGTTCCAATGTCTAGTGATATAAGCAGAGTTAAAGTTATCGATATGACAGGACCAGAGCAAAGAATTCTTAGTGGATATCATGCGATAGCTGGTGGTCAGCAATGTCCCGATGAGACTGTGACTACGTCTGATAAGAAATCTAAGGTGAATTTTGCTATGCCCGAATTGcagcataatttaaatttactcgTGGATATGTGCGAGCAAGATATTATACAAAACGATCGACGAATGAGgcatttaaatgacagagtgGTTGCTTTAGAAGCggaaaagaagaatttatcgAAAGTTGTGGATCAACATGGTCAATTAATTGATACCTTAGAAAATGTGCTCGTGATTGTGGACAGGTTAATGAATGAAACAAACGAATTGTCTCTGCAAGAAACTGCGgaagcttttaaaaatttgcaagacAATTACTATGAGGAGTACAAAATGTACGAAGTCGGTGAATTGGCCAGCAGTTTTGTGGcaccaaaaataaaagattgctTGCTCAGTTGGAATCCACTTTTGCAACCAAAACAAccaatcaaattatttgaacAATGGAAGTGTATTTTGGAGAATGGAACTAGTAGTACTACACTCCAAACACGGACTATGCATCCGTACGATCAATTAGTATGGAACGCGTGGATGCCATCAATTAGAGGAGCCATACAGCAGTGGACGTGCAGGCAGCCTGATCCTCTGATTGAACTAATAGAACATTGGATGCCATTATTGCCAAACtggattttagaaaatatattagatatattagtTTTGCCCAAATTGACATTGGAAGTGGAAGAATGGAATCCTCTTACAGACACTGTACCCATCCATACATGGATTCATCCTTGGTTGCCattattacGAAATCGTTTGGATACTTTAATTTATCCAATAATACGCAGAAAGCTTGGATCTGCATTAGGAGGTTGGCATCCATCGGATAGATCTGCTAGATTAATGCTGCAACCTTGGGCAGAAGTATTTGCCAAGGGGGATATGGAAGCGTTTTTAGTCAAAAACATTCTACCAAAATTgcaaatagttttaaatgaatttgttataaatcCACATCAACAGCATATAGACCCATGGAATTGGGTATACGAGTGGAAGGAGCTGATCCCTGTTCATATCATGGCAGGGCTACTCGACAAAGGCTTTTTTCCGAAATGGTTGCATGTTTTGGCAGTATGGCTGAATCATTCACCCAATTTTGATCAAGTGTCAGCTTGGTTTATGGGTTGGAAAAGTATGTTCAGCGATAAGTTATTGGCGGAACCAGTCATAAAAGAGCATTTCAAGAAAGCATTGGACATGATGAATAGGTCCGTCAGCGGGTCACAAAATCATCAACCTGGTGCACTGGAACAGGTTTCGTATCTAACAAACCTAGAGAGAACTCAACCGACAATGTCACAAATGGCATCAATCGCTCAGCCAAGAATGGAGAGACTCGCAGAGGCAATGCGAACAGCTTCACAAATTCCACAAGGTTTCAAAGAtcttatacaaaagaaatgcGAAGAGAGgggtatattatttatgcctATCCCAAATAGATATAAAGAAGCCAAGCAAGTATATAAAGTGGGAAACGTTCAGGCATATATCGATGGCAACGTCTTATTTGTATGTCACAATGGGACAAATTGGTTGCCGACAAATTTAAATGCCTTGCTAGATATGTCTGATCTTTAA
- Protein Sequence
- MSEDEVESFEITDYDLDNEFNIGRPRRKLSKKQQMLGIWADDSDEDELSARPSFKTFNKGPKNYTAPVSFVAGGIQQAGKPKDKEDDDDKEDEEETRESQTKLHSDSSSEDERPNSSKSRPSFSLNLDCDIAGLRKKRNQVNPSLMKSGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISTPVEAHLRRGRGAIGAYGPEKVPKIPEKKKDEDGDEAKDSKSKVSQWRKGDNSNKKKVRYCYRSVDQVLEDGKLKPNRKVPMSSDISRVKVIDMTGPEQRILSGYHAIAGGQQCPDETVTTSDKKSKVNFAMPELQHNLNLLVDMCEQDIIQNDRRMRHLNDRVVALEAEKKNLSKVVDQHGQLIDTLENVLVIVDRLMNETNELSLQETAEAFKNLQDNYYEEYKMYEVGELASSFVAPKIKDCLLSWNPLLQPKQPIKLFEQWKCILENGTSSTTLQTRTMHPYDQLVWNAWMPSIRGAIQQWTCRQPDPLIELIEHWMPLLPNWILENILDILVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAEVFAKGDMEAFLVKNILPKLQIVLNEFVINPHQQHIDPWNWVYEWKELIPVHIMAGLLDKGFFPKWLHVLAVWLNHSPNFDQVSAWFMGWKSMFSDKLLAEPVIKEHFKKALDMMNRSVSGSQNHQPGALEQVSYLTNLERTQPTMSQMASIAQPRMERLAEAMRTASQIPQGFKDLIQKKCEERGILFMPIPNRYKEAKQVYKVGNVQAYIDGNVLFVCHNGTNWLPTNLNALLDMSDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_00264266; iTF_00264990; iTF_01077460; iTF_00867394; iTF_00868097; iTF_01254790; iTF_00868793;
- 80% Identity
- -