Cflo001110.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Camponotus floridanus
Gene Symbol
TFIP11
Assembly
GCA_003227725.1
Location
NW:128012-132148[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-102 4.2e-99 331.0 16.9 1 275 389 658 389 658 0.99
2 2 0.0049 19 4.1 0.1 244 272 672 700 663 703 0.87

Sequence Information

Coding Sequence
atGTCTGAAGACGAAGTAGAAAGCTTTGAAATTACCGATTATGATTTAGATAACGAATTTAACATAAATCGTCCTCGACGCAAGCTTTCGAAGAAGCAACAAATGCTAGGAATATGGGCAGATGACAGCGATGAAGATGAATTATCTGCTAGACCATCTttcaaaacttttaataaaggTCCTAAAAATTATACAGCACCAGTTAGTTTTGTTGCTGGTGGTATCCAACAAGCAGGGAAACCAAAAGATAAAACAGATAATGATGACAAGGAAGATGAAGAGACACAGGAATTTCAAACAAAGCATCATACTGATTCTAGcTCAGAAGATGAAAGACCAAATAATTCGAAATCATGTTCACctttttctttgaatttaGACAGTGATATTGCAGGTTTGCGTAGAAAACGCAATCAAGTAAATCCATTAATAATGAAAGGTGGGATGGGTAGTTGGGAAGTACATACAAAGGGTATTGgtgctaaattattattacagatggGGTTTGAACCTGGCAAAGGTTTGGGTAAACAATTACAAGGAATAAGCACCCCAGTGGAAGCACATCTTAGAAAGGGAAGAGGTGCTATTGGTGCATATGGTCCAGAAAAGGTGCCAAAAAttccagaaaaaaagaaagatgacGACGAAGAAGAAACAAAAGAATCCAAATCCAAATCTCAATGGCGAAAGGGcgataatagtaataaaaaaaaagttagatACTGTTATAGAAGTGTTGATCAAGTTTTAGAAGATGGAAAGTTGAAACCCAATAGAAAGCTTCCAATGTCTAATGATATAAGCAGAGTTAAAGTTATTGATATGACAGGGCCAGAGCAAAGAATTCTTAGTGGATATCATGCAATAGCAGGTGGTCAGCAATGTCCTGATGAGACCATAACTATGTCTGATAAGAAATCTAAGATGAACTTTGCTCTACCTGAATTGCagcataatttaaatttactcgTGGATATGTGTGAGCaagatattatacaaaatgatCGAAGAATGAGACATTTAAATGACAGAATGATTGCTTTAGAAgcagaaaagaagaattcaTCGAAAATTGTGGATCAACATGGCCAATTAATTGATATCTTAGAGAATGTGCTTGTGATTGTGGATAGATTAATGAATGAAACAAATGAATTGTCTCTGCAAGAAATTGCGgaagcttttaaaaatttgcaagacAATTATTATGAGGAGTACAAAATGTACGAACTTGGTGAATTGGCCAGTAGTTTTGTGGCaccaaaaataaaagattgttTGCTCAGCTGGAATCCACTCTTGCAATCAAAACAACcaatcaaattatttgaaCAGTGGAAATGTATTTTAGAGAATGGAACTACTAATACTACACTCCAAACACAGACTATGCATCCATATGATCAATTAGTATGGAATGCATGGATGCCATCAATTAGAGGAGCCATACAgCAATGGACGTGTAGGCAACCAGATCCTTTGATTGAGTTAATAGAACATTGGATGCCATTATTGCCCAACTGGatcttagaaaatatattagatttattagtTTTGCCAAAATTGACATTGGAGGTGGAAGAATGGAATCCTCTTACAGACACTGTACCCATTCATACATGGATTCATCCTTGGTTGCCATTATTACGAAATCGTTTGGATACtttaatttatccaataatacGTAGAAAATTAGGATCTGCATTAGGAGGTTGGCATCCATCAGATAGATCAGCTAGATTAATGCTGCAACCTTGGGCAGAAGTGTTTGCTAAAGGAGATATGGAAGCgtttttagttaaaaatattataccaaAATTGCAAATAGCATTATCCGAATTTGTCATAAATCCACATCAACAACATATAGATCCATGGAATTGGGTGTATGAGTGGAAAGAATTGATTCCTGTTCACATTATGGCAGGACTGCTtgacaaattcttttttcCAAAGTGGTTGCAAGTTTTGGCACTTTGGCTCAATCATTCGCCGAATTACGATCAAGTTACAAATTGGTATATGGGTTGGAAAAGTATGTTAAGTGATAAGTTATTGGCAGAACCAGTGATAAAAGagCATTTCAAGAAAGCATTGGATATGATGAATAGGGCTGTCAGTGGATCACAAAATCAACCTGGTGCGATGGAACATGTTTCATATTTAACAAGCCTGGAAAGAACCCAACCGGCAATGTCGCAAATGACATCAATCGCGCAGCCAAGGATGGAGAGACTCGCAGAGGCAATGCGAACGGCCTCACAAATTCCACATGGTTTCAAAGATCTTGTGCAAAAGAAATGTGAAGAGCGgggtatattatttatgccaATTCCGAACAGATATAAAGAAGGCAAGCAAGTATACAAAGTGGGCAATATTCAAGCGTATATCGATAATAATGTCGTGTTTATATGTCACAATGGTACAAATTGGATGCCGACACATTTAAATGCTTTGTTAGATATGTCCGAACTTTAG
Protein Sequence
MSEDEVESFEITDYDLDNEFNINRPRRKLSKKQQMLGIWADDSDEDELSARPSFKTFNKGPKNYTAPVSFVAGGIQQAGKPKDKTDNDDKEDEETQEFQTKHHTDSSSEDERPNNSKSCSPFSLNLDSDIAGLRRKRNQVNPLIMKGGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISTPVEAHLRKGRGAIGAYGPEKVPKIPEKKKDDDEEETKESKSKSQWRKGDNSNKKKVRYCYRSVDQVLEDGKLKPNRKLPMSNDISRVKVIDMTGPEQRILSGYHAIAGGQQCPDETITMSDKKSKMNFALPELQHNLNLLVDMCEQDIIQNDRRMRHLNDRMIALEAEKKNSSKIVDQHGQLIDILENVLVIVDRLMNETNELSLQEIAEAFKNLQDNYYEEYKMYELGELASSFVAPKIKDCLLSWNPLLQSKQPIKLFEQWKCILENGTTNTTLQTQTMHPYDQLVWNAWMPSIRGAIQQWTCRQPDPLIELIEHWMPLLPNWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAEVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHIDPWNWVYEWKELIPVHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKSMLSDKLLAEPVIKEHFKKALDMMNRAVSGSQNQPGAMEHVSYLTSLERTQPAMSQMTSIAQPRMERLAEAMRTASQIPHGFKDLVQKKCEERGILFMPIPNRYKEGKQVYKVGNIQAYIDNNVVFICHNGTNWMPTHLNALLDMSEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00898736;
90% Identity
iTF_00109823;
80% Identity
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