Afon010244.1
Basic Information
- Insect
- Anopheles fontenillei
- Gene Symbol
- -
- Assembly
- GCA_008817895.1
- Location
- VTWG01017091.1:6303-8195[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.2e-07 0.00077 18.8 0.0 5 33 266 294 265 303 0.89 2 4 0.03 54 3.3 0.0 6 26 361 381 359 382 0.87 3 4 5.3e-09 9.6e-06 24.9 0.1 2 39 448 484 447 488 0.92 4 4 3.6e-13 6.6e-10 38.3 0.1 2 35 588 622 587 630 0.90
Sequence Information
- Coding Sequence
- ATGGCACAGTCATCTTCCGGCCAGACGAAAACGATGCTAGTATGGCTCGACTACAGCCGGCACATGCTGAGCACGCTGCAGGACATTTACGCCGACCAGCAGTACACGGACTGCCGGCTGGTGGTGCCCGACGGTGAGCTGTACGCGAACCGTCCGATACTGAGCATGGCGTCCGGGCTGTTCGAGGCAATCTTCACCAGCATGGTCACGCTCACGATGGACCCGTCCACGGTGCTCATACCGGACATGACGTTCGCCAACCTGCAGCGCGTCGTGCAGTTCATCTACACCGGCCGGGTGACGCTGCAGCCGGACGAGGTCGTTCCGTTTATGGAGGCGTGcgggctgctgcagctccGAGGCGTCGAATGTTGCGGCAACCGCACGATGGGCATTTACATTGACGAATCGGGCCCGGAAGCTACGGCGGAGGACGGTGATCCGTTCGCAACGGCCCCAGAAACGGATCCGCTGCACATCGACCACACCCGGTACCCCGGGGCGGTGGAAAAGGCTGAGCCGCCACCATTAAAACTTATTGAGCCGAATCTCGAATCTACGAGTGAGCTATTTCCGGGCAATATCTGCAAAGAAGAGTTGATGGTATCGGACGAGGACAGTgcgggggaggaggaggaggagggtgaTAAAAGTGACCCGAGCGAGGACAGCTCGATGGACGACAGCACGGACAGCGAGCAGGATGTGGAGCGGTGGATGGCGCTGGTGAAGGAGGTTGGAGTGGTCGACACGAGCCACCCGGGAGCGCCGCACTTCACGCCCTACCAGAACTGTCTGAAGCAGGCCATCGTAGCGGTCATTAGCGGGAATGTTTCGCCCAGAAGAGCGGCCGCCCGGTACAACGTACCCGCGGGCAGGCTGGTGCGCTGGACGCAGAAGGTAAAGCGAGCGATGAAAAAGAAACCAGAGACGGTAACTGCCAATGTGCCGCAGATGGTTGCCGCATACATTGACCGGAGCATACAGGAGTTCAAGCAGCTGCTAGAAACGAGCGATGCGGACGAACGTGTCAGCTTGCTGAGCGACCCATCAAATGTGCTGATGTACGACGTGCGGATTATGCTCGCGATCCACGACATCATGTACACCGGGATAAGCCTGCGCGAGGCGGTAACACGGTACAAAAACAGTGTCGGTTTGCTGAGAAACCGGCTGTACAATCTAAAGAGTCAGCGAATAACGAACCATTTTAAGTCGTTCGGCATCAGATTGAAAAGTGCGGACAAACTGACAAACGAGCGACAGGCGGCAGGGAAGAAGCGTCGAAGGTTTGAGACGGAGTCGGGGAAGATTTTGAAAACAGCCGATCCCTCCCGGTACGAGGAGAGTGTGGCCAAAGCGCTGGAGGCGATTGGTTACGGTCTATCTATCCAGCAAGCCGCAAACCACTTTCGCATACACAAAAGTGCTCTATGGCGGCACGCAAAGGCCAAGAACATAACCTTTCCGCAGGAAAGGACAGTTCTAAGGAAGAAAGCAGCGACGAAAAAAGTTAAACCGAGCGGTGGTGGTTCGATCGCTGCCTCCTCCTCCGCTACGAACAGTTGCCCCGTAGTGCCGAAGCTGGTACCGTTTGGAAGCACTGGAGCCGTCACCACCGCCGAGCGCGTTAGGGATCGTGCAGGAGGTGGTGAGATCGCTCTAGCAACGGCTAGTACGGCGGCTCCTCTGATTGCTGTGCCAAGTTTGCTTCCCCTGCCCAAGTTGGTTCCGATTTCGAGCAGCTCGCCGCCAGAGTACGAGGAGCGGATGGAGGCAGCAATCGCTATGATATCGAATCAGAAAATGAGCTACCGGGAAGCGTCGGTAAAGTACAACATTCCCAAGGCGACACTGTGGAAGAAGATAAGTAAGATGGAGCCGAAGAAGTGA
- Protein Sequence
- MAQSSSGQTKTMLVWLDYSRHMLSTLQDIYADQQYTDCRLVVPDGELYANRPILSMASGLFEAIFTSMVTLTMDPSTVLIPDMTFANLQRVVQFIYTGRVTLQPDEVVPFMEACGLLQLRGVECCGNRTMGIYIDESGPEATAEDGDPFATAPETDPLHIDHTRYPGAVEKAEPPPLKLIEPNLESTSELFPGNICKEELMVSDEDSAGEEEEEGDKSDPSEDSSMDDSTDSEQDVERWMALVKEVGVVDTSHPGAPHFTPYQNCLKQAIVAVISGNVSPRRAAARYNVPAGRLVRWTQKVKRAMKKKPETVTANVPQMVAAYIDRSIQEFKQLLETSDADERVSLLSDPSNVLMYDVRIMLAIHDIMYTGISLREAVTRYKNSVGLLRNRLYNLKSQRITNHFKSFGIRLKSADKLTNERQAAGKKRRRFETESGKILKTADPSRYEESVAKALEAIGYGLSIQQAANHFRIHKSALWRHAKAKNITFPQERTVLRKKAATKKVKPSGGGSIAASSSATNSCPVVPKLVPFGSTGAVTTAERVRDRAGGGEIALATASTAAPLIAVPSLLPLPKLVPISSSSPPEYEERMEAAIAMISNQKMSYREASVKYNIPKATLWKKISKMEPKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104498;
- 90% Identity
- iTF_00101075; iTF_00106917; iTF_00104298; iTF_00104498; iTF_00107098; iTF_00102292; iTF_00102477; iTF_00095580; iTF_00095754;
- 80% Identity
- iTF_00101075;