Aqua011847.1
Basic Information
- Insect
- Anopheles quadriannulatus
- Gene Symbol
- -
- Assembly
- GCA_000349065.1
- Location
- KB667445.1:848019-850441[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.8e-07 0.00064 18.8 0.0 5 33 267 295 266 304 0.89 2 4 0.033 45 3.3 0.0 6 26 362 382 360 383 0.87 3 4 6e-09 8e-06 24.9 0.1 2 39 449 485 448 489 0.92 4 4 4.1e-13 5.5e-10 38.3 0.1 2 35 589 623 588 631 0.90
Sequence Information
- Coding Sequence
- ATGGCACAGTCATCTTCCGGCCAGACGAAAACGATGCTAGTATGGCTCGACTACAGCCGGCACATGCTGAGCACGCTGCAGGACATTTACGCCGACCAGCAGTACACGGACTGCCGGCTGGTGGTGCCCGACGGTGAGCTGTACGCGAACCGTCCGATACTGAGCATGGCGTCCGGGCTGTTCGAGGCAATCTTCACCAGCATGGTCACGCTCACGATGGACCCGTCCACGGTGCTCATACCGGACATGACGTATGCCAACCTGCAGCGCGTCGTGCAGTTCATCTACACCGGCCGCGTGACGCTGCAGCCGGACGAGGTCGTTCCGTTTATGGAGGCGTGCGGGCTGCTGCAGCTCCGGGGCGTCGAATGTTGCGGCAACCGCACGATGGGCATTTACATTGACGAATCGGGCCCGGGAGCTACGGCGGAGGACGGTGATCCGTTCGCAACGGCCCCAGAAACGGATCCGCTGCACATCGACCACACCCGGTACCCCGGGGCGGTGGAAAAGGCTGAGCCGCCACCATTAAAACTTATTGAGCCGAATCTCGAATCTACGAGTGAGCTATTTCCGGGCAATATCTGCAAAGAAGAGTTGATGGTATCGGACGAGGACAGTGCGGAGGAGGAGGAGGAGGAGGAGGGTGGTAAAAGTGACGCGGGCGAGGACAGCTCGATGGACGACAGCACGGACAGCGAGCAGGATGTGGAGCGGTGGATGGCGCTGGTGAAGGAGGTTGGAGTGGTCGACACGAGCCACCCGGGAGCGCCGAACTTCACGCCGTACCAGAACTGTCTCAAGCAGGCCATCGTAGCGGTCATTAGCGGGAATGTTTCGCCCAGAAGAGCGGCCGCCCGGTACAACGTACCCGCGGGCAGGCTGGTGCGCTGGACGCAGAAGGTAAAGCGAGCGATGAAAAAGAAACCAGAGACGGTAACTGCCAATGTGCCGCAGATGGTTGCCGCATACATTGACCGGAGCATACAGGAGTTCAAGCAGCTGCTAGAAACGAGCGATGCGGACGAACGTGTCAGCTTGCTGAGCGACCCATCAAATGTGCTGATGTACGACGTGCGGATTATGCTCGCGATCCACGACATCATGTACACCGGGATAAGCCTGCGCGAGGCGGTAACGCGGTACAAAAACAGTGTCGGTTTGCTGAGAAACCGGCTGTACAATCTAAAGAGTCAGCGAATAACGAACCATTTTAAGTCGTTCGGCATCAGATTGAAAAGTGCGGACAAACTGACAAACGAGCGACAGGCGGCAGGGAAGAAGCGTCGAAGGTTTGAGACGGAGTCGGGGAAGATTTTGAAAACAGCCGATCCCTCCCGGTACGAGGAGAGTGTGGCCAAAGCGCTGGAGGCGATTGGTTACGGTCTATCTATCCAGCAAGCCGCAAACCACTTTCGCATACACAAAAGTGCTCTATGGCGGCACGCAAAGGCCAAGAACATAACCTTTCCGCAGGAAAGGACAGTTCTAAGGAAGAAAGCAGCGACGAAAAAAGTTAAACCGAGCGGTGGTGGTTCGATCGCTGCCTCCTCCTCCGCTACGAACAGTTGCCCCGTAGTGCCGAAGCTGGTACCGTTTGGAAGCACTGGAGCCGTCACCACCGCCGAGCGCGTTAGGAATCGTGCAGGAGGTGGTGAGATCGCTCTAGCACCGGCTAGTACGGCGGCTCCTCCGATTGCTGTGCCAAGTTTGCTTCCCCTGCCCAAGTTGGTTCCGATTTCGAGCAGCTCGCCGCCAGAGTACGAGGAGCGGATGGAGGCAGCAATCGCTATGATATCGAATCAGAAAATGAGCTACCGGGAAGCGTCGGTAAAGTACAACATTCCCAAGGCGACACTGTGGAAGAAGATAAGTAAGATGGAGCCGAAGAAGTGA
- Protein Sequence
- MAQSSSGQTKTMLVWLDYSRHMLSTLQDIYADQQYTDCRLVVPDGELYANRPILSMASGLFEAIFTSMVTLTMDPSTVLIPDMTYANLQRVVQFIYTGRVTLQPDEVVPFMEACGLLQLRGVECCGNRTMGIYIDESGPGATAEDGDPFATAPETDPLHIDHTRYPGAVEKAEPPPLKLIEPNLESTSELFPGNICKEELMVSDEDSAEEEEEEEGGKSDAGEDSSMDDSTDSEQDVERWMALVKEVGVVDTSHPGAPNFTPYQNCLKQAIVAVISGNVSPRRAAARYNVPAGRLVRWTQKVKRAMKKKPETVTANVPQMVAAYIDRSIQEFKQLLETSDADERVSLLSDPSNVLMYDVRIMLAIHDIMYTGISLREAVTRYKNSVGLLRNRLYNLKSQRITNHFKSFGIRLKSADKLTNERQAAGKKRRRFETESGKILKTADPSRYEESVAKALEAIGYGLSIQQAANHFRIHKSALWRHAKAKNITFPQERTVLRKKAATKKVKPSGGGSIAASSSATNSCPVVPKLVPFGSTGAVTTAERVRNRAGGGEIALAPASTAAPPIAVPSLLPLPKLVPISSSSPPEYEERMEAAIAMISNQKMSYREASVKYNIPKATLWKKISKMEPKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104498;
- 90% Identity
- iTF_00100894;
- 80% Identity
- iTF_00107098;