Acru002915.3
Basic Information
- Insect
- Anopheles cruzii
- Gene Symbol
- -
- Assembly
- GCA_943734635.1
- Location
- OX030879.1:13631303-13636830[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00065 0.039 14.2 4.0 1 23 203 225 203 225 0.97 2 11 0.0076 0.46 10.9 9.0 1 23 231 253 231 253 0.96 3 11 0.00012 0.0076 16.5 6.5 1 23 259 281 259 281 0.98 4 11 0.00038 0.023 15.0 2.3 1 23 287 309 287 309 0.95 5 11 5.7e-06 0.00034 20.7 0.7 1 23 315 337 315 337 0.97 6 11 3.4e-05 0.0021 18.2 0.3 1 23 343 365 343 365 0.96 7 11 4.6e-05 0.0028 17.8 1.9 1 23 370 392 370 392 0.97 8 11 0.0017 0.1 12.9 0.1 6 23 403 421 398 421 0.89 9 11 0.00046 0.028 14.7 0.1 1 23 501 523 501 523 0.97 10 11 0.005 0.3 11.4 4.0 1 23 676 698 676 698 0.97 11 11 0.0049 0.3 11.5 4.9 5 23 711 729 702 729 0.90
Sequence Information
- Coding Sequence
- ATGCCATACTTGCAGCTACCGGACGGTGCTAGCATTATTGTCAAGGACGGGAAAGGAGCGATCACGCACGCCAACAAATCGGTCCGCCGTATGCTCGTCGTAAACGATGGATCCACGCTGCAGCAGGGAACACAGCGGATAATTACGACCAGCGGCACAACGGCCACCGTCGTCGCCACAGGACACCCGAAGAAACACGAAGTCATAACGAACGGGCTCATCGAGACGAAACCGAAAACCACCATTCTGGCCACCAGTGCCGCCGGTGCGTTTATGAGTCCACTCGGGCCGATCCAGCTGACGGCCGAGGAATGCAACGACATCCTGATGAAGCGGGCCGCTGCTGCGGTGGCCGCCAACAACCAGCATGCCATCACCAACAGCACCGATGGCCATCACGCATCCATCTCCGTGCAGGTCCAGAAAGTGATCCAGGGACTGGAGGAAGGTGACGATTCGCAGGCCACCACCTCGAACCATCAGCTCAAGATTGAGCCGACGCTGAGCATTTCGCCGAAGCTCGAGGCCGTGGAAATTGATTATAATGACTACGTCCAGCAGGAGGCACCGACACCGACGCCGAACGTGGTGCCGAAGGAGCGTCCCTATTCGTGCGAACAGTGCGGCAAGTCGTTCCTGTTGAAGCACCACCTGACAACGCACGCCCGTGTCCATACAGgcgagcggccgcacgtgtgcgtgcactgtggcaaggactttgcccacaagcactgcctgaacacacatctgctgctgcactcgaccgagcggccgtaccagtgccaggagtgcaagaagagcttcacgctgaagcaccacctgctgacgcactcgcgggtccactcgcgcgaacggcccttcgtgtgccaggagtgtggccgctcgttcccgctgaagcgccacctggtgacgcacagcaagttccacgccggcgagcggccgtacgtgtgcgaggactgcggcgagagcttcgcccagaaggaacacttggtgatgcactcgcggttccacggctcggtcaacccgttcgtgtgccaggactgtggggccaccttcccgcgcaagttccagctggtgaaccacggcaagctgcacggtcgcatcccgcactcgtgcagcctgtgcggcaaagagttcctccagaagcgtacgctcacggcgcacATGAGAatccacaccggcgatcagccattcccgtgcattgcgtgcggcgaagggttccgcaccaagtcggagctgaacgcgcacaatcgtctcacgcacggtggcgttaatccgaacTCCGCGAACACGACcatcatcacgagcaactcggtcgttacgtcgaacgcccagcagcagcagcaacagcagcaacaggcccaggcccaacagcagcacatcgaggtgcaacagctgcaacaccatccgggccaggtgcaggatgtgaccaacggtaacatcatcacaacgatcgccaccaccggtcaaggttcgccggaagcgtctccgcggccccagtttgcgtgtcgcgagtgtggcagcgCGTTCAATAGCCGCGAAGCATTGGCCCTGCACCTGCGCTTGCACACCGGCGATAAGAGCCTCATGACGGACCTGTGCGCACTGACCGCTGCCATCCCAGGGCATCTGTTCCCCGTCAACCAAGATTACTCGCTTGTGGATGGCACACCGCACGGCGGTGGAGCGCTCATGACGACAAATCCCGTAATACAAAACTCCACCATTCcagtacaaataatcacctcctccgggcaggtcgttcagcaagcgatcacaccgcaaagtcctccccagcagcagcagcagcaacagcaccaccagcagcagctgcagcagcagcagcagcagcaagcgcaggtggtccagcagcagcaacaccagaccgtcgtccagcagcagaaccaacagcagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcaacagcagcagcaacagttgcagcaccaacagcagacggttgtggtggcgcaagtgaaacccaagtcccactactgtgcccactgtggcaagggattcgcggcgaagcacgggctgatgctgcataatcggcgccacgagaacggtaactgtacggtgcggacacacgtgtgcgagtgtggcaaggcgttcttccagaagaaccatctgatgctccaccagcgccagcatctggagcagagccagcgcagtggtggcggtggcggcggcgccggtgctgccagtggtgccgccagtgccgctgctgcccagcagcaagcccaaagtgcccaacagcagcagcagcagcagcagcaggcacaagcagccggcggacagcagcagctggtggtgattcagcaaacgaaccaggaagcactggtgcagcagcagcagcagcaagcagcgcaacagcaagcggccgcccaggcagccgcccagcagcaacaccagctgcagcaacaggcccaacagcaagccgtggccgttcagcagcagcagcagcagaaccagcagaacaatcagcacggcatgcgcaacctggtgatcgcgaaccaacctgtgcagGTACAGGTGCTAGAGGGTAACGCAACGCAGGTGATCAAGTACGAGATCATCCACGACACCTCGCGGCAGTCGAACGTCGAGTGA
- Protein Sequence
- MPYLQLPDGASIIVKDGKGAITHANKSVRRMLVVNDGSTLQQGTQRIITTSGTTATVVATGHPKKHEVITNGLIETKPKTTILATSAAGAFMSPLGPIQLTAEECNDILMKRAAAAVAANNQHAITNSTDGHHASISVQVQKVIQGLEEGDDSQATTSNHQLKIEPTLSISPKLEAVEIDYNDYVQQEAPTPTPNVVPKERPYSCEQCGKSFLLKHHLTTHARVHTGERPHVCVHCGKDFAHKHCLNTHLLLHSTERPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRSFPLKRHLVTHSKFHAGERPYVCEDCGESFAQKEHLVMHSRFHGSVNPFVCQDCGATFPRKFQLVNHGKLHGRIPHSCSLCGKEFLQKRTLTAHMRIHTGDQPFPCIACGEGFRTKSELNAHNRLTHGGVNPNSANTTIITSNSVVTSNAQQQQQQQQQAQAQQQHIEVQQLQHHPGQVQDVTNGNIITTIATTGQGSPEASPRPQFACRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAAIPGHLFPVNQDYSLVDGTPHGGGALMTTNPVIQNSTIPVQIITSSGQVVQQAITPQSPPQQQQQQQHHQQQLQQQQQQQAQVVQQQQHQTVVQQQNQQQQQQQQQQQQQQQQQQQQQQQLQHQQQTVVVAQVKPKSHYCAHCGKGFAAKHGLMLHNRRHENGNCTVRTHVCECGKAFFQKNHLMLHQRQHLEQSQRSGGGGGGAGAASGAASAAAAQQQAQSAQQQQQQQQQAQAAGGQQQLVVIQQTNQEALVQQQQQQAAQQQAAAQAAAQQQHQLQQQAQQQAVAVQQQQQQNQQNNQHGMRNLVIANQPVQVQVLEGNATQVIKYEIIHDTSRQSNVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092325; iTF_00108582; iTF_00096551; iTF_00109314; iTF_00105322; iTF_00098543; iTF_00092964; iTF_00099185; iTF_00105970;
- 90% Identity
- -
- 80% Identity
- -