Acol001587.1
Basic Information
- Insect
- Anopheles coluzzii
- Gene Symbol
- nfxl1
- Assembly
- GCA_016097175.1
- Location
- CM027927.1:18866890-18870002[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.93 6.6e+03 -3.0 1.4 14 19 225 230 225 230 0.86 2 18 0.096 6.8e+02 0.1 0.5 4 10 261 267 260 267 0.95 3 18 2.7e-08 0.00019 21.0 17.9 1 19 275 292 275 292 0.99 4 18 1.5 1e+04 -3.7 1.3 5 10 317 322 317 322 0.93 5 18 3.5e-06 0.025 14.3 14.7 1 19 328 347 328 347 0.97 6 18 1.6 1.2e+04 -3.8 0.7 6 10 372 376 371 376 0.86 7 18 2.3e-07 0.0017 18.0 19.1 1 19 382 400 382 400 0.99 8 18 1.9 1.4e+04 -4.1 0.7 6 10 426 430 425 432 0.58 9 18 1.6e-06 0.011 15.4 13.7 1 18 436 453 436 454 0.97 10 18 3.1e-07 0.0022 17.6 17.9 1 18 488 505 488 506 0.98 11 18 9.9e-10 7e-06 25.6 13.6 1 18 515 532 515 533 0.97 12 18 2 1.4e+04 -4.4 1.1 5 10 561 566 561 566 0.78 13 18 0.0061 43 3.9 11.8 9 18 579 588 571 589 0.91 14 18 0.087 6.2e+02 0.2 5.1 3 12 602 611 591 611 0.86 15 18 0.00014 1 9.1 4.7 1 12 682 693 682 693 0.97 16 18 0.74 5.3e+03 -2.7 1.5 15 19 706 710 705 710 0.84 17 18 0.0014 10 5.9 11.6 4 18 723 737 721 738 0.93 18 18 1.6e-06 0.012 15.3 13.2 1 17 795 813 795 815 0.86
Sequence Information
- Coding Sequence
- ATGGCCAGTCGCAACCGTAACCGGGTCGCTCCGAAAGAGCAAAACGCGTGGAACATTCCGGTGCAAACGAAATCCGAATCCGACCGACAGCCGGCGCGAAAACCATCCACTGCAAACGGTTCCAAGGGCGGTGCAGCGGCGGCGGCGGCGGCCACATCGGAACCGGCCGGTATGAGCAGCTCCAAGATTCCGCTACCCTCCAGCATGTTGAAAAAGTCGCAGGAAAAGTTCAACCAGGTACAGCGGCAGCACGCTGAAACGGCCAAGAAGTATGCGGCCGAGTACGTGTCGAGCGAGGAGGAGGAGGAGGGCGAGGACGCGAGCGGACAGGAAGCGGGTGCAGCAGCCTCAAACGATGCGGCCACGCGAAACATTCTCGGAGACGTGCTGAAGAACTACCACGGCGCCGAGGCGGACGTGGGCAAAACGCAGGAGTATTTGCAGCATCTGCTCGAATCGCGCAATGCCGTCTGCCTGATCTGCATCGAGACGGTGAAACGTGCGGACAGGATCTGGTCCTGCGCCGCGTGCTACACGTTCTTTCACCTCATGTGCATCCAGCGGTGGGCTAATGATAGCATGTCGATGAAGCGCATCAATCACGAGCAGCAGGAGGGCTACTACAACAACCGGGGGGAGTACATACCGAAGCCGGCGCTCGACGTGCACTGGGACTGCCCGAAGTGTCGCCGGGAGTACGAGCCGGAGGCGATACCGCGCCATTACGAGTGCTTCTGCGGCAAGGAGCGGGAACCGAACGCCCATCCCTGGCTGATTCCGCACTCGTGCGGTGAGCCGTGCGAGAAGCAGCTTAATCCGGCGTGCGGCCACACCTGCCGGCTCCTGTGCCATCCGGGGCCGTGTCCGCCGTGTCCGCAGACGGTGAATGTGTCGTGCCGTTGCGGAAGTTCGCCCGTGAAAACGATCCGCTGTGCGCAGAAATCGTGGACTTGCGCAAGGAAGTGTAAAAGAAAACTAGCCTGTGGGATACACGAGTGCGGTGCCCAGTGTCACGACGCTGGCCAGTGTCCACCGTGCCAGAACCGCAGCAAGCAGCCGTGCCTATGTGGCGCACAAACCAAAGAGGTCAACTGTCACGAATCGCGCTGGCAGTGTGACAGTGTGTGCAATAAACCGTTCCCCTGCGGGTTGCACCACTGTGAGGGCGTGTGTCATGCTGGACCGTGCGGTCCCTGTCCCCTCGGGCTGCCACGCTCGTGTCCGTGCGGCAAGACGGAAACTCGCGCCGCCTCCTGCTCGGAGCGCATCGGCACGTGCGGTGACACGTGCGAGAAGGTGCTTGCCTGCGGACAGCATCTCTGCCCGGAACGGTGCCACCAGGGCGCGTGTGGCAACTGTCTGGAGCTCGTGCCGAAGGTGTGTCGGTGCGGCTCGACCAAGAAACCGATCGTGTGTCACCGGGAAGCGATCTGCGAGGGTCGCTGCAAGCGGACGCGCACCTGCGGCAAGCACCAGTGCAATCGGAAGTGTTGCGATGGCCAATGTCCGCCCTGTGATAGGGTGTGCGGGAAGACGCTACCGTGTGGAAAGCACAAGTGCAGCTCGCTCTGCCACCAGGGCCCGTGCTATCCTTGCAATCAGAAATCCACGATCAAGTGTCGCTGTGGCGGTACCGTGGCCGAGGTGGCATGCGGACGGGAAAGGAAAGCGAACGCACCGAAGTGCAAGCTACCGTGCCGGGCTGCCTCCAAGTGTCACCATCCGAACACGCACACCTGCCACCCCGGTGACTGTCCGGCGTGCGTGCTGCCCTGCGGCCAGCCGAACGATACGACCAACTGCGAGCATCCGTGCCGGGCCAAGTGTCACGATGCGGTGCAGGTGGTGACGCGGGAGAAAAACTTCAAACCCGTCGGCCCGTGGGACGTGCCGAAGGAGACGGTCGAGGTGAAAACGCTGCCCCATCCGGCCTGCACCGTGAAGGTGCCGGTCATGTGTCTCGGTGGTCACGAAACGGCCGACTGGCCCTGCTCCAGCTCGAAACCATCGTCCTGCGGGCGGCAGTGCGGCCGGTTGCTGAAGTGCGGCGTACACCGCTGCCCGCTCGCCTGCCACAAGGTGACGCACCGGGCCAGCACGACGCAGGATTCGCGCTGTGAGCCGTGCTCGGCCGGCTGCACGTTGCCCCGGCCGGAGGGTTGCGTTCACTCGTGCGCGCTGCGCTGCCACAAGCCGCCGTGCGATCCGTGCCTGGTGTCGATCAAGTCACAGTGCTACTGCGGCCTGACGCAGGTGTTTTACAAATGCCACGAGTTTTATCCCACCGGCATGGAGGGGAAGGAACCGGAAGAGTTGGCCGAGCTGGCACGGCGGCGCGAGTCGTTTCTTAGCTGTGGTCAAAAGTGTATTAAAAACTTCCCTTGTGGGCATCGCTGCACCTCCATCTGCCATCCCGGGCGCTGTCCGAATCCGGAGCAGTGCTCGAAGAAGGTAAAGGTAGCGTGCAAATGTGGCCAGCGAAAGGTGGAGGTAAGCTGCAAGGTGGCGCGCGCCACACCGACGCTCGACTGCGACCAGCAGTGTGAAGCCGTCCGGGCCCAGAAGCAGGAGGAGCAGGAGCGCAAGGAGCGGGAAGCGCGGGCAGAGGAAGAGCTGCAGAATCAGCGCGAGCTGGAGGAGTACGAGCGCAAGTTTGGCAAGCGGAAGCACCGCGAACGGAAGCGGCACCAGGTGCAGCAGGAGGAAAAGGGAACGCATTGGGCGGTTTACGTAGCGCCAGTAGTGGCTGTGTTGATAGGTGTAGCATTGTACTTTCTGTTTGTGCAATAA
- Protein Sequence
- MASRNRNRVAPKEQNAWNIPVQTKSESDRQPARKPSTANGSKGGAAAAAAATSEPAGMSSSKIPLPSSMLKKSQEKFNQVQRQHAETAKKYAAEYVSSEEEEEGEDASGQEAGAAASNDAATRNILGDVLKNYHGAEADVGKTQEYLQHLLESRNAVCLICIETVKRADRIWSCAACYTFFHLMCIQRWANDSMSMKRINHEQQEGYYNNRGEYIPKPALDVHWDCPKCRREYEPEAIPRHYECFCGKEREPNAHPWLIPHSCGEPCEKQLNPACGHTCRLLCHPGPCPPCPQTVNVSCRCGSSPVKTIRCAQKSWTCARKCKRKLACGIHECGAQCHDAGQCPPCQNRSKQPCLCGAQTKEVNCHESRWQCDSVCNKPFPCGLHHCEGVCHAGPCGPCPLGLPRSCPCGKTETRAASCSERIGTCGDTCEKVLACGQHLCPERCHQGACGNCLELVPKVCRCGSTKKPIVCHREAICEGRCKRTRTCGKHQCNRKCCDGQCPPCDRVCGKTLPCGKHKCSSLCHQGPCYPCNQKSTIKCRCGGTVAEVACGRERKANAPKCKLPCRAASKCHHPNTHTCHPGDCPACVLPCGQPNDTTNCEHPCRAKCHDAVQVVTREKNFKPVGPWDVPKETVEVKTLPHPACTVKVPVMCLGGHETADWPCSSSKPSSCGRQCGRLLKCGVHRCPLACHKVTHRASTTQDSRCEPCSAGCTLPRPEGCVHSCALRCHKPPCDPCLVSIKSQCYCGLTQVFYKCHEFYPTGMEGKEPEELAELARRRESFLSCGQKCIKNFPCGHRCTSICHPGRCPNPEQCSKKVKVACKCGQRKVEVSCKVARATPTLDCDQQCEAVRAQKQEEQERKEREARAEEELQNQRELEEYERKFGKRKHRERKRHQVQQEEKGTHWAVYVAPVVAVLIGVALYFLFVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104083;
- 90% Identity
- iTF_00102765; iTF_00093876; iTF_00107387; iTF_00101375; iTF_00104842;
- 80% Identity
- -