Agam007776.1
Basic Information
- Insect
- Anopheles gambiae
- Gene Symbol
- nfxl1
- Assembly
- GCF_000005575.2
- Location
- NT:14649450-14652355[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.86 5.4e+03 -2.9 1.4 14 19 157 162 157 162 0.86 2 18 0.089 5.5e+02 0.2 0.5 4 10 193 199 192 199 0.95 3 18 2.5e-08 0.00016 21.1 17.9 1 19 207 224 207 224 0.99 4 18 1.3 8.4e+03 -3.6 1.3 5 10 249 254 249 254 0.93 5 18 3.2e-06 0.02 14.4 14.7 1 19 260 279 260 279 0.97 6 18 1.5 9.4e+03 -3.7 0.7 6 10 304 308 303 308 0.86 7 18 1e-08 6.4e-05 22.4 17.8 1 19 314 332 314 332 0.99 8 18 0.97 6.1e+03 -3.1 0.5 1 7 358 363 357 365 0.48 9 18 1.4e-06 0.009 15.5 13.7 1 18 368 385 368 386 0.97 10 18 2.9e-07 0.0018 17.8 17.9 1 18 420 437 420 438 0.98 11 18 9.1e-10 5.7e-06 25.7 13.6 1 18 447 464 447 465 0.97 12 18 2 1.2e+04 -4.3 1.1 5 10 493 498 493 498 0.78 13 18 0.0033 21 4.8 11.1 9 18 511 520 502 521 0.91 14 18 0.08 5e+02 0.3 5.1 3 12 534 543 523 543 0.86 15 18 0.00013 0.82 9.3 4.7 1 12 614 625 614 625 0.97 16 18 0.68 4.3e+03 -2.6 1.5 15 19 638 642 637 642 0.84 17 18 0.0013 8.2 6.1 11.6 4 18 655 669 653 670 0.93 18 18 1.5e-06 0.0094 15.5 13.2 1 17 727 745 727 747 0.86
Sequence Information
- Coding Sequence
- ATGTTGAAAAAGTCGCAGGAAAAGTTCAACCAGGTACAGCGGCAGCACGCCGAAACGGCCAAGAAGTATGCGGCCGAGTACGTGTcgagcgaggaggaggaggagggcgaGGACGCGAGTGGACAGGAAGCGGGTGCAGCAGCCTCAAACGATGCGGCCACGCGAAACATTCTCGGAGACGTGCTGAAGAACTACCACGGCGCCGAGGCGGACGTGGGCAAAACGCAGGAGTATTTGCAGCATCTGCTCGAATCGCGCAATGCCGTCTGCCTGATCTGCATCGAGACGGTGAAACGTGCGGACAGGATCTGGTCCTGCGCGGCGTGCTACACGTTCTTTCACCTCATGTGTATCCAGCGGTGGGCTAATGATAGCATGTCGATGAAGCGCATCAATCACGAGCAGCAGGAGGGCTACTACAACAACCGGGGGGAGTACATACCGAAGCCGGCGCTCGACGTGCACTGGGACTGCCCGAAGTGTCGCCGGGAGTACGAGCCGGAGGCGATACCGCGCCATTACGAGTGCTTCTGCGGCAAGGAGAGGGAACCGAACGCCCATCCCTGGCTGATTCCGCACTCGTGCGGTGAGCCGTGCGAGAAGCAGCTTAATCCGGCGTGCGGCCACACCTGCCGGCTCCTGTGCCATCCGGGGCCGTGTCCGCCGTGTCCGCAGACGGTGAATGTGTCGTGCCGTTGCGGAAGTTCGCCCGTGAAAACGATCCGCTGTGCGCAGAAATCGTGGACTTGCGCAAGGAAGTGTAAAAGAAAACTAGCCTGTGGGATACACGAGTGCGGTGCCCAGTGTCACGACGCTGGCCAGTGTCCACCGTGCCAGAACCGCAGCAAGCAGCCGTGCCTATGTGGCGCACAAACCAAAGAGGTCAACTGTCACGAATCGCGCTGGCAGTGTGACAGTGTGTGCAATAAACCGTTCCCCTGCGGGTTGCACCACTGTGAGAGCGTGTGTCATGCTGGACCGTGCGGTCCCTGTCCCCTCGGGCTGCCACGCTCGTGTCCGTGCGGCAAGACGGAAACTCGCGCAGCCTCCTGCTCGGAGCGCATAGGCACGTGCGGTGACACGTGCGAGAAGGTGCTTGTCTGCGGACAGCATCTCTGCCCGGAACGGTGCCACCAGGGCGCGTGTGGCAACTGTCTGGAGCTCGTGCCGAAGGTGTGTCGGTGCGGCTCGACCAAGAAACCGATCGTGTGTCACCGAGAAGCGATCTGCGAGGGTCGCTGCAAGCGGACGCGTACCTGCGGCAAGCACCAGTGCAATCGGAAGTGTTGCGATGGCCAATGTCCGCCCTGTGATAGGGTGTGCGGGAAGACGCTACCGTGTGGGAAGCACAAGTGCAGCTCGCTCTGCCACCAGGGCCCGTGCTATCCTTGCAATCAGAAATCCACGATCAAGTGTCGCTGTGGCGGTACCGTGGCCGAGGTGGCATGCGGTCGGGAAAGGAAAGCGAACGCACCGAAGTGCAAGCTACCGTGCCGGGCTGCCTCCAAGTGTCATCATCCGAACACGCACACCTGCCACCCCGGGGACTGTCCGGCGTGCGTGCTGCCCTGCGGCCAGCCGAACGATACGACCAACTGCGAGCATCCGTGCCGGGCCAAGTGTCACGATGCGGTGCAGGTGGTGACGCGGGAGAAAAACTTCAAACCCGTCGGCCCGTGGGACGTGCCGAAGGAGACGGTCGAGGTGAAAACGTTGCCCCATCCGGCGTGCACCGTGAAGGTGCCGGTCATGTGTCTCGGTGGTCACGAAACGGCCGACTGGCCCTGCTCCAGCTCGAAACCATCGTCCTGCGGGCGGCAGTGCGGTCGGTTGCTGAAGTGCGGCGTACATCGCTGCCCGCTCGCCTGCCACAAGGTGACGCACCGGGCCAGCACGACGCAGGATTCGCGCTGCGAGCCGTGCTCGGCCGGCTGCACGCTGCCCCGGCCGGAGGGTTGCGTTCACTCGTGCGCGCTGCGCTGCCACAAGCCGCCGTGCGATCCGTGCCTGGTGTCGATCAAGTCACAGTGCTACTGCGGCCTGACGCAGGTGTTTTACAAATGCCACGAGTTTTACCCCACCGGCATGGAGGGGAAGGAACCGGAAGAGTTGGCCGAGCTGGCACGGCGGCGCGAGTCGTTTCTTAGCTGTGGTCAAAAGTGTATTAAAAACTTCCCTTGTGGGCATCGCTGCACCTCCATCTGCCATCCCGGGCGCTGTCCGAATCCGGAGCAGTGCTCGAAGAAGGTAAAGGTGGCGTGCAAATGTGGCCAGCGAAAGGTGGAGGTAAGTTGCAAGGTGGCGCGCGCCACACCGACGCTTGACTGCGACCAGCAGTGTGAAGCCGTCCGGGCCCAGAagcaggaggagcaggagcgcAAGGAGCGGGAAGCGCGGGCAGAGGAAGAGCTGCAGAATCAGCGCGAGCTGGAGGAGTACGAGCGCAAGTTTGGCAAGCGGAAGCACCGCGAACGGAAGCGGCACCAGGTGCAGCAGGAGGAAAAGGGAACGCATTGGGCGGTTTACGTAGCGCCAGTAGTGGCTGTGTTGATAGGTGTAGCATTGTACTTTCTGtttgtgcaataa
- Protein Sequence
- MLKKSQEKFNQVQRQHAETAKKYAAEYVSSEEEEEGEDASGQEAGAAASNDAATRNILGDVLKNYHGAEADVGKTQEYLQHLLESRNAVCLICIETVKRADRIWSCAACYTFFHLMCIQRWANDSMSMKRINHEQQEGYYNNRGEYIPKPALDVHWDCPKCRREYEPEAIPRHYECFCGKEREPNAHPWLIPHSCGEPCEKQLNPACGHTCRLLCHPGPCPPCPQTVNVSCRCGSSPVKTIRCAQKSWTCARKCKRKLACGIHECGAQCHDAGQCPPCQNRSKQPCLCGAQTKEVNCHESRWQCDSVCNKPFPCGLHHCESVCHAGPCGPCPLGLPRSCPCGKTETRAASCSERIGTCGDTCEKVLVCGQHLCPERCHQGACGNCLELVPKVCRCGSTKKPIVCHREAICEGRCKRTRTCGKHQCNRKCCDGQCPPCDRVCGKTLPCGKHKCSSLCHQGPCYPCNQKSTIKCRCGGTVAEVACGRERKANAPKCKLPCRAASKCHHPNTHTCHPGDCPACVLPCGQPNDTTNCEHPCRAKCHDAVQVVTREKNFKPVGPWDVPKETVEVKTLPHPACTVKVPVMCLGGHETADWPCSSSKPSSCGRQCGRLLKCGVHRCPLACHKVTHRASTTQDSRCEPCSAGCTLPRPEGCVHSCALRCHKPPCDPCLVSIKSQCYCGLTQVFYKCHEFYPTGMEGKEPEELAELARRRESFLSCGQKCIKNFPCGHRCTSICHPGRCPNPEQCSKKVKVACKCGQRKVEVSCKVARATPTLDCDQQCEAVRAQKQEEQERKEREARAEEELQNQRELEEYERKFGKRKHRERKRHQVQQEEKGTHWAVYVAPVVAVLIGVALYFLFVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104083;
- 90% Identity
- iTF_00096068;
- 80% Identity
- -